RNA–Protein interactions for RNA: ENST00000617548.1

ACACA-239, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,063 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-239ENST00000617548 CCDC30Q5VVM6 783 aa29.77■■■□□ 2.36
ACACA-239ENST00000617548 TSPYL6Q8N831 410 aa29.77■■■□□ 2.36
ACACA-239ENST00000617548 RPGRQ92834 1020 aaKnown RBP29.77■■■□□ 2.36
ACACA-239ENST00000617548 NFKBIEO00221 500 aa29.76■■■□□ 2.35
ACACA-239ENST00000617548 NLRP10Q86W26 655 aa29.76■■■□□ 2.35
ACACA-239ENST00000617548 CRY2Q49AN0 593 aa29.75■■■□□ 2.35
ACACA-239ENST00000617548 RIC1Q4ADV7 1423 aa29.75■■■□□ 2.35
ACACA-239ENST00000617548 WDR63Q8IWG1 891 aa29.75■■■□□ 2.35
ACACA-239ENST00000617548 C1QTNF8P60827 252 aa29.74■■■□□ 2.35
ACACA-239ENST00000617548 GOLGA2Q08379 1002 aa29.74■■■□□ 2.35
ACACA-239ENST00000617548 TRMT112Q9UI30 125 aaKnown RBP29.74■■■□□ 2.35
ACACA-239ENST00000617548 RIC3Q7Z5B4 369 aa29.73■■■□□ 2.35
ACACA-239ENST00000617548 NLRP3Q96P20 1036 aa29.73■■■□□ 2.35
ACACA-239ENST00000617548 PHAXQ9H814 394 aaKnown RBP29.73■■■□□ 2.35
ACACA-239ENST00000617548 RNF123Q5XPI4 1314 aa29.72■■■□□ 2.35
ACACA-239ENST00000617548 PRELPP51888 382 aa29.72■■■□□ 2.35
ACACA-239ENST00000617548 TAOK3Q9H2K8 898 aa29.72■■■□□ 2.35
ACACA-239ENST00000617548 FER1L6Q2WGJ9 1857 aa29.72■■■□□ 2.35
ACACA-239ENST00000617548 TWISTNBQ3B726 338 aaPredicted RBP29.71■■■□□ 2.35
ACACA-239ENST00000617548 CCDC93Q567U6 631 aa29.71■■■□□ 2.35
ACACA-239ENST00000617548 C7orf43Q8WVR3 580 aa29.71■■■□□ 2.35
ACACA-239ENST00000617548 ZNF428Q96B54 188 aa29.71■■■□□ 2.35
ACACA-239ENST00000617548 RBM17Q96I25 401 aaKnown RBP29.71■■■□□ 2.35
ACACA-239ENST00000617548 CCDC88AQ3V6T2 1871 aa29.71■■■□□ 2.35
ACACA-239ENST00000617548 ATP5J2-PTCD1G3V325 749 aa29.7■■■□□ 2.35
ACACA-239ENST00000617548 SLC10A5Q5PT55 438 aa29.7■■■□□ 2.35
ACACA-239ENST00000617548 STK31Q9BXU1 1019 aa29.7■■■□□ 2.35
ACACA-239ENST00000617548 FANCIQ9NVI1 1328 aa29.7■■■□□ 2.34
ACACA-239ENST00000617548 KDM2BQ8NHM5 1336 aa29.69■■■□□ 2.34
ACACA-239ENST00000617548 SH3TC1Q8TE82 1336 aa29.69■■■□□ 2.34
ACACA-239ENST00000617548 LTBP3Q9NS15 1303 aa29.69■■■□□ 2.34
ACACA-239ENST00000617548 ZC3H4Q9UPT8 1303 aaKnown RBP29.69■■■□□ 2.34
ACACA-239ENST00000617548 DDX58O95786 925 aaKnown RBP29.68■■■□□ 2.34
ACACA-239ENST00000617548 HOXA10P31260 410 aaPredicted RBP29.68■■■□□ 2.34
ACACA-239ENST00000617548 C3orf67Q6ZVT6 689 aa29.68■■■□□ 2.34
ACACA-239ENST00000617548 ISCA1Q9BUE6 129 aa29.68■■■□□ 2.34
ACACA-239ENST00000617548 TCERG1O14776 1098 aaKnown RBP29.67■■■□□ 2.34
ACACA-239ENST00000617548 HCLS1P14317 486 aaPredicted RBP29.67■■■□□ 2.34
ACACA-239ENST00000617548 SYNE4Q8N205 404 aa29.67■■■□□ 2.34
ACACA-239ENST00000617548 OLFM4Q6UX06 510 aa29.66■■■□□ 2.34
ACACA-239ENST00000617548 RTKN2Q8IZC4 609 aa29.66■■■□□ 2.34
ACACA-239ENST00000617548 CRAMP1Q96RY5 1269 aa29.65■■■□□ 2.34
ACACA-239ENST00000617548 NMRK2Q9NPI5 230 aa29.65■■■□□ 2.34
ACACA-239ENST00000617548 TIAM2Q8IVF5 1701 aa29.65■■■□□ 2.34
ACACA-239ENST00000617548 KIF3CO14782 793 aa29.64■■■□□ 2.34
ACACA-239ENST00000617548 MYD88Q99836 296 aa29.63■■■□□ 2.33
ACACA-239ENST00000617548 MYH16Q9H6N6 1097 aa29.63■■■□□ 2.33
ACACA-239ENST00000617548 FKBP4Q02790 459 aaKnown RBP eCLIP29.62■■■□□ 2.33
ACACA-239ENST00000617548 TRIM28Q13263 835 aaKnown RBP29.62■■■□□ 2.33
ACACA-239ENST00000617548 FAM89AQ96GI7 184 aa29.62■■■□□ 2.33
ACACA-239ENST00000617548 PPEF1O14829 653 aaPredicted RBP29.61■■■□□ 2.33
ACACA-239ENST00000617548 SLC4A2P04920 1241 aa29.61■■■□□ 2.33
ACACA-239ENST00000617548 EXOSC9Q06265 439 aaKnown RBP29.61■■■□□ 2.33
ACACA-239ENST00000617548 RTL5Q5HYW3 569 aaPredicted RBP29.61■■■□□ 2.33
ACACA-239ENST00000617548 CC2D2BQ6DHV5 1058 aa29.6■■■□□ 2.33
ACACA-239ENST00000617548 TMX4Q9H1E5 349 aaPredicted RBP29.6■■■□□ 2.33
ACACA-239ENST00000617548 SPINK5Q9NQ38 1064 aaPredicted RBP29.6■■■□□ 2.33
ACACA-239ENST00000617548 MAP3K2Q9Y2U5 619 aa29.6■■■□□ 2.33
ACACA-239ENST00000617548 DICER1Q9UPY3 1922 aaKnown RBP29.6■■■□□ 2.33
ACACA-239ENST00000617548 LAMB2P55268 1798 aa29.59■■■□□ 2.33
ACACA-239ENST00000617548 GLTPD2A6NH11 291 aa29.59■■■□□ 2.33
ACACA-239ENST00000617548 DPY19L2Q6NUT2 758 aa29.59■■■□□ 2.33
ACACA-239ENST00000617548 METTL22Q9BUU2 404 aaPredicted RBP29.59■■■□□ 2.33
ACACA-239ENST00000617548 RRAGCQ9HB90 399 aa29.59■■■□□ 2.33
ACACA-239ENST00000617548 ZNF277Q9NRM2 450 aaPredicted RBP29.59■■■□□ 2.33
ACACA-239ENST00000617548 ABCC4O15439 1325 aa29.58■■■□□ 2.33
ACACA-239ENST00000617548 KSR2Q6VAB6 950 aa29.58■■■□□ 2.33
ACACA-239ENST00000617548 DDX46Q7L014 1031 aaKnown RBP29.58■■■□□ 2.33
ACACA-239ENST00000617548 C16orf71Q8IYS4 520 aaPredicted RBP29.58■■■□□ 2.33
ACACA-239ENST00000617548 PI4KAP2A4QPH2 592 aa29.57■■■□□ 2.32
ACACA-239ENST00000617548 CCER2I3L3R5 266 aa29.57■■■□□ 2.32
ACACA-239ENST00000617548 VAMP4O75379 141 aa29.57■■■□□ 2.32
ACACA-239ENST00000617548 PI4KAP1Q8N8J0 262 aa29.57■■■□□ 2.32
ACACA-239ENST00000617548 GRIPAP1Q4V328 841 aa29.56■■■□□ 2.32
ACACA-239ENST00000617548 G2E3Q7L622 706 aa29.56■■■□□ 2.32
ACACA-239ENST00000617548 CCDC191Q8NCU4 936 aa29.56■■■□□ 2.32
ACACA-239ENST00000617548 DDX60Q8IY21 1712 aaKnown RBP29.55■■■□□ 2.32
ACACA-239ENST00000617548 IRS4O14654 1257 aaPredicted RBP29.55■■■□□ 2.32
ACACA-239ENST00000617548 ZBTB38Q8NAP3 1195 aaPredicted RBP29.55■■■□□ 2.32
ACACA-239ENST00000617548 CWC25Q9NXE8 425 aaPredicted RBP29.55■■■□□ 2.32
ACACA-239ENST00000617548 BBOX1O75936 387 aa29.54■■■□□ 2.32
ACACA-239ENST00000617548 TOMM70O94826 608 aa29.54■■■□□ 2.32
ACACA-239ENST00000617548 NEXNQ0ZGT2 675 aa29.54■■■□□ 2.32
ACACA-239ENST00000617548 PSMD1Q99460 953 aa29.54■■■□□ 2.32
ACACA-239ENST00000617548 HSP90B1P14625 803 aaKnown RBP29.53■■■□□ 2.32
ACACA-239ENST00000617548 ATP6V0A2Q9Y487 856 aa29.53■■■□□ 2.32
ACACA-239ENST00000617548 IARSP41252 1262 aaKnown RBP29.52■■■□□ 2.32
ACACA-239ENST00000617548 ZNF521Q96K83 1311 aa29.51■■■□□ 2.32
ACACA-239ENST00000617548 FLIIQ13045 1269 aa29.51■■■□□ 2.31
ACACA-239ENST00000617548 GRAPQ13588 217 aa29.51■■■□□ 2.31
ACACA-239ENST00000617548 GRAPLQ8TC17 118 aaPredicted RBP29.51■■■□□ 2.31
ACACA-239ENST00000617548 PCCAP05165 728 aaPredicted RBP29.5■■■□□ 2.31
ACACA-239ENST00000617548 VEGFAP15692 232 aaPredicted RBP29.5■■■□□ 2.31
ACACA-239ENST00000617548 FKBP5Q13451 457 aaPredicted RBP29.5■■■□□ 2.31
ACACA-239ENST00000617548 SF3B3Q15393 1217 aaKnown RBP29.5■■■□□ 2.31
ACACA-239ENST00000617548 SLC51AQ86UW1 340 aa29.5■■■□□ 2.31
ACACA-239ENST00000617548 SNED1Q8TER0 1413 aa29.5■■■□□ 2.31
ACACA-239ENST00000617548 JARID2Q92833 1246 aaPredicted RBP29.49■■■□□ 2.31
ACACA-239ENST00000617548 CACNA1FO60840 1977 aa29.48■■■□□ 2.31
ACACA-239ENST00000617548 SP8Q8IXZ3 490 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms