RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 EXOC5O00471 708 aa18.9■□□□□ 0.62
SEMA3B-212ENST00000616701 NEK4P51957 841 aa18.9■□□□□ 0.62
SEMA3B-212ENST00000616701 TTC41PQ6P2S7 1318 aa18.9■□□□□ 0.62
SEMA3B-212ENST00000616701 RFX5P48382 616 aaPredicted RBP18.9■□□□□ 0.62
SEMA3B-212ENST00000616701 CASP7P55210 303 aa18.9■□□□□ 0.62
SEMA3B-212ENST00000616701 PTPN12Q05209 780 aaKnown RBP18.9■□□□□ 0.62
SEMA3B-212ENST00000616701 CWC25Q9NXE8 425 aaPredicted RBP18.9■□□□□ 0.62
SEMA3B-212ENST00000616701 UBR2Q8IWV8 1755 aa18.9■□□□□ 0.62
SEMA3B-212ENST00000616701 AK9Q5TCS8 1911 aa18.9■□□□□ 0.62
SEMA3B-212ENST00000616701 DDIT3P35638 169 aa18.9■□□□□ 0.62
SEMA3B-212ENST00000616701 TFCP2Q12800 502 aa18.9■□□□□ 0.62
SEMA3B-212ENST00000616701 ERBB4Q15303 1308 aa18.89■□□□□ 0.61
SEMA3B-212ENST00000616701 GPATCH3Q96I76 525 aa18.89■□□□□ 0.61
SEMA3B-212ENST00000616701 NDUFB9Q9Y6M9 179 aa18.89■□□□□ 0.61
SEMA3B-212ENST00000616701 TNS2Q63HR2 1409 aa18.89■□□□□ 0.61
SEMA3B-212ENST00000616701 CCDC85AQ96PX6 553 aaPredicted RBP18.89■□□□□ 0.61
SEMA3B-212ENST00000616701 UPF3BQ9BZI7 483 aaKnown RBP18.89■□□□□ 0.61
SEMA3B-212ENST00000616701 USP42Q9H9J4 1324 aaKnown RBP18.88■□□□□ 0.61
SEMA3B-212ENST00000616701 ST18O60284 1047 aa18.88■□□□□ 0.61
SEMA3B-212ENST00000616701 MCCP23508 829 aa18.88■□□□□ 0.61
SEMA3B-212ENST00000616701 EDC3Q96F86 508 aaKnown RBP18.88■□□□□ 0.61
SEMA3B-212ENST00000616701 SGSM2O43147 1006 aa18.87■□□□□ 0.61
SEMA3B-212ENST00000616701 PRIM1P49642 420 aaKnown RBP18.87■□□□□ 0.61
SEMA3B-212ENST00000616701 ACSBG1Q96GR2 724 aa18.87■□□□□ 0.61
SEMA3B-212ENST00000616701 SLC4A9Q96Q91 983 aa18.87■□□□□ 0.61
SEMA3B-212ENST00000616701 DIAPH3Q9NSV4 1193 aa18.87■□□□□ 0.61
SEMA3B-212ENST00000616701 COL16A1Q07092 1604 aaPredicted RBP18.87■□□□□ 0.61
SEMA3B-212ENST00000616701 MCM4P33991 863 aa18.87■□□□□ 0.61
SEMA3B-212ENST00000616701 FOXO4P98177 505 aa18.87■□□□□ 0.61
SEMA3B-212ENST00000616701 ZNF594Q96JF6 807 aaPredicted RBP18.87■□□□□ 0.61
SEMA3B-212ENST00000616701 PAPPAQ13219 1627 aa18.87■□□□□ 0.61
SEMA3B-212ENST00000616701 H7C1W4 665 aa18.87■□□□□ 0.61
SEMA3B-212ENST00000616701 TNPO1Q92973 898 aaKnown RBP18.87■□□□□ 0.61
SEMA3B-212ENST00000616701 COPRSQ9NQ92 184 aa18.87■□□□□ 0.61
SEMA3B-212ENST00000616701 COL14A1Q05707 1796 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-212ENST00000616701 RABL6Q3YEC7 729 aaPredicted RBP18.86■□□□□ 0.61
SEMA3B-212ENST00000616701 ZGPATQ8N5A5 531 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-212ENST00000616701 DISP2A7MBM2 1401 aa18.86■□□□□ 0.61
SEMA3B-212ENST00000616701 GPTP24298 496 aa18.85■□□□□ 0.61
SEMA3B-212ENST00000616701 SSFA2P28290 1259 aa18.85■□□□□ 0.61
SEMA3B-212ENST00000616701 DHX37Q8IY37 1157 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-212ENST00000616701 SYNE4Q8N205 404 aa18.84■□□□□ 0.61
SEMA3B-212ENST00000616701 FAM227BQ96M60 508 aa18.84■□□□□ 0.61
SEMA3B-212ENST00000616701 DBNLQ9UJU6 430 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-212ENST00000616701 AHDC1Q5TGY3 1603 aaPredicted RBP18.84■□□□□ 0.61
SEMA3B-212ENST00000616701 STARD3NLO95772 234 aa18.84■□□□□ 0.61
SEMA3B-212ENST00000616701 TNNI3KQ59H18 835 aa18.84■□□□□ 0.61
SEMA3B-212ENST00000616701 FAM89AQ96GI7 184 aa18.84■□□□□ 0.61
SEMA3B-212ENST00000616701 LSG1Q9H089 658 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-212ENST00000616701 FPGT-TNNI3KV9GXZ4 949 aa18.84■□□□□ 0.61
SEMA3B-212ENST00000616701 LTBP4Q8N2S1 1624 aa18.83■□□□□ 0.61
SEMA3B-212ENST00000616701 ITGB4P16144 1822 aa18.83■□□□□ 0.61
SEMA3B-212ENST00000616701 HLFQ16534 295 aa18.83■□□□□ 0.61
SEMA3B-212ENST00000616701 KIAA1211Q6ZU35 1233 aa18.83■□□□□ 0.61
SEMA3B-212ENST00000616701 DBNDD2Q9BQY9 259 aa18.83■□□□□ 0.61
SEMA3B-212ENST00000616701 PTH1RQ03431 593 aa18.83■□□□□ 0.6
SEMA3B-212ENST00000616701 KIF6Q6ZMV9 814 aa18.83■□□□□ 0.6
SEMA3B-212ENST00000616701 CCDC191Q8NCU4 936 aa18.83■□□□□ 0.6
SEMA3B-212ENST00000616701 GZF1Q9H116 711 aaPredicted RBP18.83■□□□□ 0.6
SEMA3B-212ENST00000616701 ZBTB1Q9Y2K1 713 aa18.83■□□□□ 0.6
SEMA3B-212ENST00000616701 PKP1Q13835 747 aa18.82■□□□□ 0.6
SEMA3B-212ENST00000616701 EVI5LQ96CN4 794 aa18.82■□□□□ 0.6
SEMA3B-212ENST00000616701 LARP6Q9BRS8 491 aaKnown RBP18.82■□□□□ 0.6
SEMA3B-212ENST00000616701 FSD1Q9BTV5 496 aa18.82■□□□□ 0.6
SEMA3B-212ENST00000616701 CHGBP05060 677 aa18.82■□□□□ 0.6
SEMA3B-212ENST00000616701 GTF2E1P29083 439 aaPredicted RBP18.82■□□□□ 0.6
SEMA3B-212ENST00000616701 LRRC24Q50LG9 513 aa18.82■□□□□ 0.6
SEMA3B-212ENST00000616701 RASEFQ8IZ41 740 aa18.82■□□□□ 0.6
SEMA3B-212ENST00000616701 HSPA4P34932 840 aa18.81■□□□□ 0.6
SEMA3B-212ENST00000616701 TCIRG1Q13488 830 aa18.81■□□□□ 0.6
SEMA3B-212ENST00000616701 RAB3GAP1Q15042 981 aa18.81■□□□□ 0.6
SEMA3B-212ENST00000616701 NEUROD6Q96NK8 337 aa18.81■□□□□ 0.6
SEMA3B-212ENST00000616701 RAD50Q92878 1312 aa18.81■□□□□ 0.6
SEMA3B-212ENST00000616701 NUP188Q5SRE5 1749 aa18.81■□□□□ 0.6
SEMA3B-212ENST00000616701 BCL9O00512 1426 aa18.81■□□□□ 0.6
SEMA3B-212ENST00000616701 NMIQ13287 307 aaPredicted RBP18.81■□□□□ 0.6
SEMA3B-212ENST00000616701 DDB1Q16531 1140 aa18.81■□□□□ 0.6
SEMA3B-212ENST00000616701 DNAJC2Q99543 621 aaKnown RBP18.81■□□□□ 0.6
SEMA3B-212ENST00000616701 PUS3Q9BZE2 481 aaKnown RBP18.81■□□□□ 0.6
SEMA3B-212ENST00000616701 CPA1P15085 419 aa18.81■□□□□ 0.6
SEMA3B-212ENST00000616701 PHLPP1O60346 1717 aa18.8■□□□□ 0.6
SEMA3B-212ENST00000616701 TMX3Q96JJ7 454 aa18.8■□□□□ 0.6
SEMA3B-212ENST00000616701 ISCA1Q9BUE6 129 aa18.8■□□□□ 0.6
SEMA3B-212ENST00000616701 CIZ1Q9ULV3 898 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-212ENST00000616701 TBC1D2BQ9UPU7 963 aa18.8■□□□□ 0.6
SEMA3B-212ENST00000616701 CYP19A1P11511 503 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-212ENST00000616701 TIMM10P62072 90 aa18.8■□□□□ 0.6
SEMA3B-212ENST00000616701 SPATA31A1Q5TZJ5 1347 aa18.8■□□□□ 0.6
SEMA3B-212ENST00000616701 FOXD4L5Q5VV16 416 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-212ENST00000616701 FOXD4L4Q8WXT5 416 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-212ENST00000616701 TEX13AQ9BXU3 409 aaPredicted RBP18.8■□□□□ 0.6
SEMA3B-212ENST00000616701 PLCD3Q8N3E9 789 aa18.79■□□□□ 0.6
SEMA3B-212ENST00000616701 SNX14Q9Y5W7 946 aa18.79■□□□□ 0.6
SEMA3B-212ENST00000616701 A0A0D9SFI3 127 aa18.79■□□□□ 0.6
SEMA3B-212ENST00000616701 ATG9AQ7Z3C6 839 aa18.79■□□□□ 0.6
SEMA3B-212ENST00000616701 TJP1Q07157 1748 aa18.78■□□□□ 0.6
SEMA3B-212ENST00000616701 ANAPC15P60006 121 aa18.78■□□□□ 0.6
SEMA3B-212ENST00000616701 PRPF40BQ6NWY9 871 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-212ENST00000616701 RUFY2Q8WXA3 655 aa18.78■□□□□ 0.6
SEMA3B-212ENST00000616701 COL22A1Q8NFW1 1626 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms