RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 PTCH1Q13635 1447 aa15.59■□□□□ 0.09
PPP4R3B-206ENST00000616407 CDK11BP21127 795 aaKnown RBP15.58■□□□□ 0.09
PPP4R3B-206ENST00000616407 NPHP4O75161 1426 aaPredicted RBP15.58■□□□□ 0.09
PPP4R3B-206ENST00000616407 PCDH11XQ9BZA7 1347 aa15.58■□□□□ 0.08
PPP4R3B-206ENST00000616407 PCDH11YQ9BZA8 1340 aa15.58■□□□□ 0.08
PPP4R3B-206ENST00000616407 PDIA4P13667 645 aaKnown RBP15.58■□□□□ 0.08
PPP4R3B-206ENST00000616407 IL15P40933 162 aaPredicted RBP15.58■□□□□ 0.08
PPP4R3B-206ENST00000616407 AK2P54819 239 aa15.58■□□□□ 0.08
PPP4R3B-206ENST00000616407 PROSER3Q2NL68 480 aa15.58■□□□□ 0.08
PPP4R3B-206ENST00000616407 XRCC6P12956 609 aaKnown RBP eCLIP15.58■□□□□ 0.08
PPP4R3B-206ENST00000616407 TDO2P48775 406 aa15.58■□□□□ 0.08
PPP4R3B-206ENST00000616407 CCT2P78371 535 aaKnown RBP15.58■□□□□ 0.08
PPP4R3B-206ENST00000616407 TMEM94Q12767 1356 aa15.58■□□□□ 0.08
PPP4R3B-206ENST00000616407 AGLP35573 1532 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 PPFIA3O75145 1194 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 PHKG2P15735 406 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 GCKRQ14397 625 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 TRIM5Q9C035 493 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 TFIP11Q9UBB9 837 aaKnown RBP15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 CFAP45Q9UL16 551 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 MTMR7Q9Y216 660 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 RIMBP3CA6NJZ7 1639 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 RIMBP3BA6NNM3 1639 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 RIMBP3Q9UFD9 1639 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 HAND2P61296 217 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 LRRC2Q9BYS8 371 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 RAI14Q9P0K7 980 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 HMG20BQ9P0W2 317 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 PRAMEF22A3QJZ6 481 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 HMGB1P09429 215 aaKnown RBP15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 PANK2Q9BZ23 570 aa15.57■□□□□ 0.08
PPP4R3B-206ENST00000616407 SGSM2O43147 1006 aa15.56■□□□□ 0.08
PPP4R3B-206ENST00000616407 GUCY1B3Q02153 619 aa15.56■□□□□ 0.08
PPP4R3B-206ENST00000616407 PLBD2Q8NHP8 589 aa15.56■□□□□ 0.08
PPP4R3B-206ENST00000616407 NUP62CLQ9H1M0 184 aa15.56■□□□□ 0.08
PPP4R3B-206ENST00000616407 BTG4Q9NY30 223 aa15.56■□□□□ 0.08
PPP4R3B-206ENST00000616407 SLAIN2Q9P270 581 aa15.56■□□□□ 0.08
PPP4R3B-206ENST00000616407 NEURL4Q96JN8 1562 aa15.56■□□□□ 0.08
PPP4R3B-206ENST00000616407 CAMK4Q16566 473 aa15.56■□□□□ 0.08
PPP4R3B-206ENST00000616407 TIMM10P62072 90 aa15.55■□□□□ 0.08
PPP4R3B-206ENST00000616407 MCMDC2Q4G0Z9 681 aa15.55■□□□□ 0.08
PPP4R3B-206ENST00000616407 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.55■□□□□ 0.08
PPP4R3B-206ENST00000616407 BRF1Q92994 677 aa15.55■□□□□ 0.08
PPP4R3B-206ENST00000616407 ACSBG1Q96GR2 724 aa15.55■□□□□ 0.08
PPP4R3B-206ENST00000616407 ZNF213O14771 459 aa15.55■□□□□ 0.08
PPP4R3B-206ENST00000616407 CREB3L3Q68CJ9 461 aa15.55■□□□□ 0.08
PPP4R3B-206ENST00000616407 AOX1Q06278 1338 aa15.55■□□□□ 0.08
PPP4R3B-206ENST00000616407 CCDC69A6NI79 296 aa15.55■□□□□ 0.08
PPP4R3B-206ENST00000616407 ZSCAN22P10073 491 aaPredicted RBP15.55■□□□□ 0.08
PPP4R3B-206ENST00000616407 SPC24Q8NBT2 197 aa15.55■□□□□ 0.08
PPP4R3B-206ENST00000616407 NUP133Q8WUM0 1156 aa15.55■□□□□ 0.08
PPP4R3B-206ENST00000616407 DLC1Q96QB1 1528 aa15.55■□□□□ 0.08
PPP4R3B-206ENST00000616407 ZNF652Q9Y2D9 606 aa15.54■□□□□ 0.08
PPP4R3B-206ENST00000616407 IBTKQ9P2D0 1353 aaPredicted RBP15.54■□□□□ 0.08
PPP4R3B-206ENST00000616407 CPS1P31327 1500 aa15.54■□□□□ 0.08
PPP4R3B-206ENST00000616407 ZSCAN23Q3MJ62 389 aa15.54■□□□□ 0.08
PPP4R3B-206ENST00000616407 SCAND2PQ9GZW5 306 aaPredicted RBP15.54■□□□□ 0.08
PPP4R3B-206ENST00000616407 ANKARQ7Z5J8 1434 aa15.54■□□□□ 0.08
PPP4R3B-206ENST00000616407 DBNDD2Q9BQY9 259 aa15.54■□□□□ 0.08
PPP4R3B-206ENST00000616407 R3HCC1Q9Y3T6 440 aaKnown RBP15.54■□□□□ 0.08
PPP4R3B-206ENST00000616407 ZC3H13Q5T200 1668 aaKnown RBP15.54■□□□□ 0.08
PPP4R3B-206ENST00000616407 TPD52L1Q16890 204 aaPredicted RBP15.54■□□□□ 0.08
PPP4R3B-206ENST00000616407 CCDC183Q5T5S1 534 aa15.54■□□□□ 0.08
PPP4R3B-206ENST00000616407 NGLY1Q96IV0 654 aa15.54■□□□□ 0.08
PPP4R3B-206ENST00000616407 FAM227BQ96M60 508 aa15.54■□□□□ 0.08
PPP4R3B-206ENST00000616407 ADAMTS13Q76LX8 1427 aa15.54■□□□□ 0.08
PPP4R3B-206ENST00000616407 NEURL1BA8MQ27 555 aa15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 RAD21O60216 631 aa15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 XBP1P17861 261 aa15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 CCDC171Q6TFL3 1326 aa15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 IQSEC2Q5JU85 1478 aa15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 PREX1Q8TCU6 1659 aa15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 ATP2B3Q16720 1220 aa15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 FAM89AQ96GI7 184 aa15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 PAG1Q9NWQ8 432 aa15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 HOOK1Q9UJC3 728 aaKnown RBP15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 MYO3AQ8NEV4 1616 aa15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 MARCH6O60337 910 aa15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 MAP3K12Q12852 859 aa15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 INTS4Q96HW7 963 aaKnown RBP15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 NAPBQ9H115 298 aa15.53■□□□□ 0.08
PPP4R3B-206ENST00000616407 ERBB3P21860 1342 aa15.52■□□□□ 0.08
PPP4R3B-206ENST00000616407 SLC5A1P13866 664 aa15.52■□□□□ 0.08
PPP4R3B-206ENST00000616407 TRIM22Q8IYM9 498 aa15.52■□□□□ 0.08
PPP4R3B-206ENST00000616407 ZNF592Q92610 1267 aa15.52■□□□□ 0.08
PPP4R3B-206ENST00000616407 NAT10Q9H0A0 1025 aaKnown RBP15.52■□□□□ 0.08
PPP4R3B-206ENST00000616407 CNPY2Q9Y2B0 182 aa15.52■□□□□ 0.08
PPP4R3B-206ENST00000616407 SNX14Q9Y5W7 946 aa15.52■□□□□ 0.08
PPP4R3B-206ENST00000616407 NDUFB9Q9Y6M9 179 aa15.52■□□□□ 0.08
PPP4R3B-206ENST00000616407 PPLO60437 1756 aa15.52■□□□□ 0.08
PPP4R3B-206ENST00000616407 CD2BP2O95400 341 aaKnown RBP15.52■□□□□ 0.07
PPP4R3B-206ENST00000616407 MAP3K11Q16584 847 aa15.52■□□□□ 0.07
PPP4R3B-206ENST00000616407 TNNI3KQ59H18 835 aa15.52■□□□□ 0.07
PPP4R3B-206ENST00000616407 UNC5CLQ8IV45 518 aa15.52■□□□□ 0.07
PPP4R3B-206ENST00000616407 FPGT-TNNI3KV9GXZ4 949 aa15.52■□□□□ 0.07
PPP4R3B-206ENST00000616407 PALD1Q9ULE6 856 aa15.52■□□□□ 0.07
PPP4R3B-206ENST00000616407 PES1O00541 588 aaKnown RBP15.51■□□□□ 0.07
PPP4R3B-206ENST00000616407 USP48Q86UV5 1035 aa15.51■□□□□ 0.07
PPP4R3B-206ENST00000616407 DTNBO60941 627 aa15.51■□□□□ 0.07
PPP4R3B-206ENST00000616407 HMGN5P82970 282 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms