RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 RIC1Q4ADV7 1423 aa21.96■■□□□ 1.11
LHX1-202ENST00000616237 C21orf2O43822 256 aa21.96■■□□□ 1.11
LHX1-202ENST00000616237 PRELPP51888 382 aa21.96■■□□□ 1.11
LHX1-202ENST00000616237 RASSF7Q02833 373 aa21.96■■□□□ 1.11
LHX1-202ENST00000616237 EXOSC9Q06265 439 aaKnown RBP21.96■■□□□ 1.11
LHX1-202ENST00000616237 PRPF40BQ6NWY9 871 aaKnown RBP21.96■■□□□ 1.11
LHX1-202ENST00000616237 SYNE4Q8N205 404 aa21.96■■□□□ 1.11
LHX1-202ENST00000616237 ZNF219Q9P2Y4 722 aaPredicted RBP21.96■■□□□ 1.11
LHX1-202ENST00000616237 NFKBIEO00221 500 aa21.95■■□□□ 1.1
LHX1-202ENST00000616237 VAMP4O75379 141 aa21.95■■□□□ 1.1
LHX1-202ENST00000616237 SLC10A5Q5PT55 438 aa21.95■■□□□ 1.1
LHX1-202ENST00000616237 DIEXFQ68CQ4 756 aaKnown RBP21.95■■□□□ 1.1
LHX1-202ENST00000616237 ARFGEF2Q9Y6D5 1785 aa21.94■■□□□ 1.1
LHX1-202ENST00000616237 ATP5J2-PTCD1G3V325 749 aa21.94■■□□□ 1.1
LHX1-202ENST00000616237 GOLGA2Q08379 1002 aa21.94■■□□□ 1.1
LHX1-202ENST00000616237 C9orf131Q5VYM1 1079 aa21.94■■□□□ 1.1
LHX1-202ENST00000616237 C7orf43Q8WVR3 580 aa21.94■■□□□ 1.1
LHX1-202ENST00000616237 CACNA1SQ13698 1873 aa21.94■■□□□ 1.1
LHX1-202ENST00000616237 G2E3Q7L622 706 aa21.93■■□□□ 1.1
LHX1-202ENST00000616237 RIC3Q7Z5B4 369 aa21.93■■□□□ 1.1
LHX1-202ENST00000616237 MIER1Q8N108 512 aa21.93■■□□□ 1.1
LHX1-202ENST00000616237 CHMP4AQ9BY43 222 aa21.92■■□□□ 1.1
LHX1-202ENST00000616237 SBF1O95248 1867 aa21.92■■□□□ 1.1
LHX1-202ENST00000616237 MYH16Q9H6N6 1097 aa21.91■■□□□ 1.1
LHX1-202ENST00000616237 TRMT112Q9UI30 125 aaKnown RBP21.91■■□□□ 1.1
LHX1-202ENST00000616237 RNF123Q5XPI4 1314 aa21.91■■□□□ 1.1
LHX1-202ENST00000616237 SLC4A2P04920 1241 aa21.9■■□□□ 1.1
LHX1-202ENST00000616237 HCLS1P14317 486 aaPredicted RBP21.9■■□□□ 1.1
LHX1-202ENST00000616237 HOXA10P31260 410 aaPredicted RBP21.9■■□□□ 1.1
LHX1-202ENST00000616237 TRIM28Q13263 835 aaKnown RBP21.9■■□□□ 1.1
LHX1-202ENST00000616237 OLFM4Q6UX06 510 aa21.9■■□□□ 1.1
LHX1-202ENST00000616237 STK31Q9BXU1 1019 aa21.9■■□□□ 1.1
LHX1-202ENST00000616237 RNF181Q9P0P0 153 aa21.9■■□□□ 1.1
LHX1-202ENST00000616237 SH3TC1Q8TE82 1336 aa21.9■■□□□ 1.1
LHX1-202ENST00000616237 ZNF526Q8TF50 670 aaPredicted RBP21.89■■□□□ 1.1
LHX1-202ENST00000616237 FER1L6Q2WGJ9 1857 aa21.89■■□□□ 1.1
LHX1-202ENST00000616237 SLC51AQ86UW1 340 aa21.88■■□□□ 1.09
LHX1-202ENST00000616237 NLRP3Q96P20 1036 aa21.88■■□□□ 1.09
LHX1-202ENST00000616237 MYD88Q99836 296 aa21.88■■□□□ 1.09
LHX1-202ENST00000616237 PI4KAP2A4QPH2 592 aa21.87■■□□□ 1.09
LHX1-202ENST00000616237 ALDH1B1P30837 517 aa21.87■■□□□ 1.09
LHX1-202ENST00000616237 PI4KAP1Q8N8J0 262 aa21.87■■□□□ 1.09
LHX1-202ENST00000616237 RPGRQ92834 1020 aaKnown RBP21.87■■□□□ 1.09
LHX1-202ENST00000616237 FAM89AQ96GI7 184 aa21.87■■□□□ 1.09
LHX1-202ENST00000616237 METTL22Q9BUU2 404 aaPredicted RBP21.87■■□□□ 1.09
LHX1-202ENST00000616237 MAP3K2Q9Y2U5 619 aa21.87■■□□□ 1.09
LHX1-202ENST00000616237 DDX58O95786 925 aaKnown RBP21.87■■□□□ 1.09
LHX1-202ENST00000616237 LMNB1P20700 586 aa21.87■■□□□ 1.09
LHX1-202ENST00000616237 KSR2Q6VAB6 950 aa21.87■■□□□ 1.09
LHX1-202ENST00000616237 LAMB2P55268 1798 aa21.86■■□□□ 1.09
LHX1-202ENST00000616237 RTL5Q5HYW3 569 aaPredicted RBP21.86■■□□□ 1.09
LHX1-202ENST00000616237 CRAMP1Q96RY5 1269 aa21.86■■□□□ 1.09
LHX1-202ENST00000616237 SNED1Q8TER0 1413 aa21.85■■□□□ 1.09
LHX1-202ENST00000616237 LTBP3Q9NS15 1303 aa21.85■■□□□ 1.09
LHX1-202ENST00000616237 FLIIQ13045 1269 aa21.85■■□□□ 1.09
LHX1-202ENST00000616237 CCDC93Q567U6 631 aa21.85■■□□□ 1.09
LHX1-202ENST00000616237 CDCA7LQ96GN5 454 aa21.85■■□□□ 1.09
LHX1-202ENST00000616237 DDX60Q8IY21 1712 aaKnown RBP21.84■■□□□ 1.09
LHX1-202ENST00000616237 IGKV5-2P06315 115 aa21.84■■□□□ 1.09
LHX1-202ENST00000616237 SLFN5Q08AF3 891 aa21.84■■□□□ 1.09
LHX1-202ENST00000616237 SOGA3Q5TF21 947 aa21.84■■□□□ 1.09
LHX1-202ENST00000616237 CCDC191Q8NCU4 936 aa21.84■■□□□ 1.09
LHX1-202ENST00000616237 RBM17Q96I25 401 aaKnown RBP21.84■■□□□ 1.09
LHX1-202ENST00000616237 TAOK3Q9H2K8 898 aa21.84■■□□□ 1.09
LHX1-202ENST00000616237 GPBP1L1Q9HC44 474 aaPredicted RBP21.84■■□□□ 1.09
LHX1-202ENST00000616237 CCDC88AQ3V6T2 1871 aa21.84■■□□□ 1.09
LHX1-202ENST00000616237 ABCC4O15439 1325 aa21.83■■□□□ 1.08
LHX1-202ENST00000616237 E9PSI1 815 aa21.82■■□□□ 1.08
LHX1-202ENST00000616237 ZBTB38Q8NAP3 1195 aaPredicted RBP21.82■■□□□ 1.08
LHX1-202ENST00000616237 JARID2Q92833 1246 aaPredicted RBP21.82■■□□□ 1.08
LHX1-202ENST00000616237 IRS4O14654 1257 aaPredicted RBP21.81■■□□□ 1.08
LHX1-202ENST00000616237 CWC25Q9NXE8 425 aaPredicted RBP21.81■■□□□ 1.08
LHX1-202ENST00000616237 CACNA1FO60840 1977 aa21.8■■□□□ 1.08
LHX1-202ENST00000616237 FKBP5Q13451 457 aaPredicted RBP21.8■■□□□ 1.08
LHX1-202ENST00000616237 PPEF1O14829 653 aaPredicted RBP21.79■■□□□ 1.08
LHX1-202ENST00000616237 PCCAP05165 728 aaPredicted RBP21.79■■□□□ 1.08
LHX1-202ENST00000616237 FKBP4Q02790 459 aaKnown RBP eCLIP21.79■■□□□ 1.08
LHX1-202ENST00000616237 SF3B3Q15393 1217 aaKnown RBP21.79■■□□□ 1.08
LHX1-202ENST00000616237 CWF19L2Q2TBE0 894 aaKnown RBP21.79■■□□□ 1.08
LHX1-202ENST00000616237 TRMT2AQ8IZ69 625 aaKnown RBP21.79■■□□□ 1.08
LHX1-202ENST00000616237 COL4A1P02462 1669 aa21.78■■□□□ 1.08
LHX1-202ENST00000616237 NEURL1BA8MQ27 555 aa21.78■■□□□ 1.08
LHX1-202ENST00000616237 KIF3CO14782 793 aa21.78■■□□□ 1.08
LHX1-202ENST00000616237 RTKN2Q8IZC4 609 aa21.78■■□□□ 1.08
LHX1-202ENST00000616237 NMRK2Q9NPI5 230 aa21.78■■□□□ 1.08
LHX1-202ENST00000616237 ZC3H4Q9UPT8 1303 aaKnown RBP21.78■■□□□ 1.08
LHX1-202ENST00000616237 TAF1P21675 1872 aa21.78■■□□□ 1.08
LHX1-202ENST00000616237 TIAM2Q8IVF5 1701 aa21.77■■□□□ 1.08
LHX1-202ENST00000616237 DNAAF4Q8WXU2 420 aa21.77■■□□□ 1.08
LHX1-202ENST00000616237 ZNF277Q9NRM2 450 aaPredicted RBP21.77■■□□□ 1.08
LHX1-202ENST00000616237 DICER1Q9UPY3 1922 aaKnown RBP21.77■■□□□ 1.08
LHX1-202ENST00000616237 F6X3S4 739 aa21.76■■□□□ 1.07
LHX1-202ENST00000616237 NEXNQ0ZGT2 675 aa21.76■■□□□ 1.07
LHX1-202ENST00000616237 GRAPQ13588 217 aa21.76■■□□□ 1.07
LHX1-202ENST00000616237 CC2D2BQ6DHV5 1058 aa21.76■■□□□ 1.07
LHX1-202ENST00000616237 DDX46Q7L014 1031 aaKnown RBP21.76■■□□□ 1.07
LHX1-202ENST00000616237 GRAPLQ8TC17 118 aaPredicted RBP21.76■■□□□ 1.07
LHX1-202ENST00000616237 ATP6V0A2Q9Y487 856 aa21.76■■□□□ 1.07
LHX1-202ENST00000616237 BBOX1O75936 387 aa21.74■■□□□ 1.07
LHX1-202ENST00000616237 CELF1Q92879 486 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms