RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 DIP2BQ9P265 1576 aa16.58■□□□□ 0.25
SSBP2-220ENST00000615665 UBE2HP62256 183 aa16.58■□□□□ 0.24
SSBP2-220ENST00000615665 RBM10P98175 930 aaKnown RBP16.58■□□□□ 0.24
SSBP2-220ENST00000615665 TCEANC2Q96MN5 208 aa16.58■□□□□ 0.24
SSBP2-220ENST00000615665 ADGRB2O60241 1585 aa16.58■□□□□ 0.24
SSBP2-220ENST00000615665 A0A0U1RQG5 324 aaPredicted RBP16.58■□□□□ 0.24
SSBP2-220ENST00000615665 USP48Q86UV5 1035 aa16.58■□□□□ 0.24
SSBP2-220ENST00000615665 SUCLG2Q96I99 432 aa16.58■□□□□ 0.24
SSBP2-220ENST00000615665 NEK1Q96PY6 1258 aa16.58■□□□□ 0.24
SSBP2-220ENST00000615665 SLC52A2Q9HAB3 445 aa16.58■□□□□ 0.24
SSBP2-220ENST00000615665 OVOS2A0A0J9YW53 1432 aa16.58■□□□□ 0.24
SSBP2-220ENST00000615665 OVOS2Q6IE36 1432 aa16.58■□□□□ 0.24
SSBP2-220ENST00000615665 IFIT5Q13325 482 aaKnown RBP16.57■□□□□ 0.24
SSBP2-220ENST00000615665 STK38Q15208 465 aa16.57■□□□□ 0.24
SSBP2-220ENST00000615665 MAP3K11Q16584 847 aa16.57■□□□□ 0.24
SSBP2-220ENST00000615665 IMMTQ16891 758 aaKnown RBP16.57■□□□□ 0.24
SSBP2-220ENST00000615665 STAP2Q9UGK3 403 aa16.57■□□□□ 0.24
SSBP2-220ENST00000615665 TPM2P07951 284 aa16.57■□□□□ 0.24
SSBP2-220ENST00000615665 SAFBQ15424 915 aaKnown RBP eCLIP16.57■□□□□ 0.24
SSBP2-220ENST00000615665 PKNOX2Q96KN3 472 aa16.57■□□□□ 0.24
SSBP2-220ENST00000615665 ADAMTS13Q76LX8 1427 aa16.57■□□□□ 0.24
SSBP2-220ENST00000615665 RICTORQ6R327 1708 aa16.57■□□□□ 0.24
SSBP2-220ENST00000615665 TULP1O00294 542 aaPredicted RBP16.57■□□□□ 0.24
SSBP2-220ENST00000615665 ME1P48163 572 aa16.57■□□□□ 0.24
SSBP2-220ENST00000615665 CNPY2Q9Y2B0 182 aa16.57■□□□□ 0.24
SSBP2-220ENST00000615665 SNX14Q9Y5W7 946 aa16.57■□□□□ 0.24
SSBP2-220ENST00000615665 TECPR2O15040 1411 aa16.57■□□□□ 0.24
SSBP2-220ENST00000615665 CREB3L3Q68CJ9 461 aa16.57■□□□□ 0.24
SSBP2-220ENST00000615665 CCDC171Q6TFL3 1326 aa16.57■□□□□ 0.24
SSBP2-220ENST00000615665 SSH2Q76I76 1423 aa16.57■□□□□ 0.24
SSBP2-220ENST00000615665 HSPA4P34932 840 aa16.56■□□□□ 0.24
SSBP2-220ENST00000615665 SPC24Q8NBT2 197 aa16.56■□□□□ 0.24
SSBP2-220ENST00000615665 METTL22Q9BUU2 404 aaPredicted RBP16.56■□□□□ 0.24
SSBP2-220ENST00000615665 EPB41L2O43491 1005 aaKnown RBP16.56■□□□□ 0.24
SSBP2-220ENST00000615665 PRIM1P49642 420 aaKnown RBP16.56■□□□□ 0.24
SSBP2-220ENST00000615665 ARHGEF25Q86VW2 580 aa16.56■□□□□ 0.24
SSBP2-220ENST00000615665 NAT10Q9H0A0 1025 aaKnown RBP16.56■□□□□ 0.24
SSBP2-220ENST00000615665 VPS53Q5VIR6 699 aa16.56■□□□□ 0.24
SSBP2-220ENST00000615665 F13A1P00488 732 aa16.55■□□□□ 0.24
SSBP2-220ENST00000615665 CPA1P15085 419 aa16.55■□□□□ 0.24
SSBP2-220ENST00000615665 MPHOSPH8Q99549 860 aa16.55■□□□□ 0.24
SSBP2-220ENST00000615665 PALD1Q9ULE6 856 aa16.55■□□□□ 0.24
SSBP2-220ENST00000615665 SHPRHQ149N8 1683 aa16.55■□□□□ 0.24
SSBP2-220ENST00000615665 KDRP35968 1356 aa16.55■□□□□ 0.24
SSBP2-220ENST00000615665 KIF20BQ96Q89 1820 aa16.55■□□□□ 0.24
SSBP2-220ENST00000615665 KDM4AO75164 1064 aa16.55■□□□□ 0.24
SSBP2-220ENST00000615665 IDH1O75874 414 aaKnown RBP16.55■□□□□ 0.24
SSBP2-220ENST00000615665 TFCP2Q12800 502 aa16.55■□□□□ 0.24
SSBP2-220ENST00000615665 SART3Q15020 963 aaKnown RBP16.55■□□□□ 0.24
SSBP2-220ENST00000615665 CAMK4Q16566 473 aa16.55■□□□□ 0.24
SSBP2-220ENST00000615665 KLHDC4Q8TBB5 520 aa16.54■□□□□ 0.24
SSBP2-220ENST00000615665 TEX13AQ9BXU3 409 aaPredicted RBP16.54■□□□□ 0.24
SSBP2-220ENST00000615665 CLCN1P35523 988 aa16.54■□□□□ 0.24
SSBP2-220ENST00000615665 ZNF496Q96IT1 587 aaPredicted RBP16.54■□□□□ 0.24
SSBP2-220ENST00000615665 CRB1P82279 1406 aa16.53■□□□□ 0.24
SSBP2-220ENST00000615665 TFIP11Q9UBB9 837 aaKnown RBP16.53■□□□□ 0.24
SSBP2-220ENST00000615665 MCMDC2Q4G0Z9 681 aa16.53■□□□□ 0.24
SSBP2-220ENST00000615665 RRP12Q5JTH9 1297 aaKnown RBP16.53■□□□□ 0.24
SSBP2-220ENST00000615665 RUFY3Q7L099 469 aa16.53■□□□□ 0.24
SSBP2-220ENST00000615665 SNRKQ9NRH2 765 aa16.53■□□□□ 0.24
SSBP2-220ENST00000615665 LMBRD1Q9NUN5 540 aa16.53■□□□□ 0.24
SSBP2-220ENST00000615665 GPTP24298 496 aa16.53■□□□□ 0.24
SSBP2-220ENST00000615665 IL15P40933 162 aaPredicted RBP16.53■□□□□ 0.24
SSBP2-220ENST00000615665 HMGN5P82970 282 aaKnown RBP16.53■□□□□ 0.24
SSBP2-220ENST00000615665 GCKRQ14397 625 aa16.53■□□□□ 0.24
SSBP2-220ENST00000615665 HSP90AB3PQ58FF7 597 aa16.53■□□□□ 0.24
SSBP2-220ENST00000615665 UNC5CLQ8IV45 518 aa16.53■□□□□ 0.24
SSBP2-220ENST00000615665 USP25Q9UHP3 1055 aa16.53■□□□□ 0.24
SSBP2-220ENST00000615665 SIGLEC1Q9BZZ2 1709 aa16.53■□□□□ 0.24
SSBP2-220ENST00000615665 SYT1P21579 422 aa16.52■□□□□ 0.24
SSBP2-220ENST00000615665 RASSF8Q8NHQ8 419 aa16.52■□□□□ 0.24
SSBP2-220ENST00000615665 HOOK1Q9UJC3 728 aaKnown RBP16.52■□□□□ 0.24
SSBP2-220ENST00000615665 MAP2P11137 1827 aaKnown RBP16.52■□□□□ 0.24
SSBP2-220ENST00000615665 PKP1Q13835 747 aa16.52■□□□□ 0.24
SSBP2-220ENST00000615665 DDX17Q92841 729 aaKnown RBP16.52■□□□□ 0.24
SSBP2-220ENST00000615665 BRF1Q92994 677 aa16.52■□□□□ 0.23
SSBP2-220ENST00000615665 PROSER3Q2NL68 480 aa16.51■□□□□ 0.23
SSBP2-220ENST00000615665 ZNF592Q92610 1267 aa16.51■□□□□ 0.23
SSBP2-220ENST00000615665 TRMT112Q9UI30 125 aaKnown RBP16.51■□□□□ 0.23
SSBP2-220ENST00000615665 FAM227BQ96M60 508 aa16.51■□□□□ 0.23
SSBP2-220ENST00000615665 IL2RBP14784 551 aa16.51■□□□□ 0.23
SSBP2-220ENST00000615665 CCT2P78371 535 aaKnown RBP16.51■□□□□ 0.23
SSBP2-220ENST00000615665 DNM1Q05193 864 aaKnown RBP16.51■□□□□ 0.23
SSBP2-220ENST00000615665 PLBD2Q8NHP8 589 aa16.51■□□□□ 0.23
SSBP2-220ENST00000615665 NACAP1Q9BZK3 213 aa16.51■□□□□ 0.23
SSBP2-220ENST00000615665 NPHP4O75161 1426 aaPredicted RBP16.5■□□□□ 0.23
SSBP2-220ENST00000615665 PCDH11XQ9BZA7 1347 aa16.5■□□□□ 0.23
SSBP2-220ENST00000615665 PCDH11YQ9BZA8 1340 aa16.5■□□□□ 0.23
SSBP2-220ENST00000615665 ANKRD18BA2A2Z9 1011 aa16.5■□□□□ 0.23
SSBP2-220ENST00000615665 LDHAL6AQ6ZMR3 332 aa16.5■□□□□ 0.23
SSBP2-220ENST00000615665 NEURL1BA8MQ27 555 aa16.5■□□□□ 0.23
SSBP2-220ENST00000615665 BRD1O95696 1058 aa16.5■□□□□ 0.23
SSBP2-220ENST00000615665 PHKG2P15735 406 aa16.5■□□□□ 0.23
SSBP2-220ENST00000615665 ZNF445P59923 1031 aa16.5■□□□□ 0.23
SSBP2-220ENST00000615665 HCLS1P14317 486 aaPredicted RBP16.49■□□□□ 0.23
SSBP2-220ENST00000615665 TNNI3KQ59H18 835 aa16.49■□□□□ 0.23
SSBP2-220ENST00000615665 AIDAQ96BJ3 306 aa16.49■□□□□ 0.23
SSBP2-220ENST00000615665 PAG1Q9NWQ8 432 aa16.49■□□□□ 0.23
SSBP2-220ENST00000615665 FPGT-TNNI3KV9GXZ4 949 aa16.49■□□□□ 0.23
SSBP2-220ENST00000615665 CDKL5O76039 1030 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms