RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 ANKRD36CQ5JPF3 1778 aa32.51■■■□□ 2.79
SURF1-205ENST00000615505 NPR1P16066 1061 aa32.51■■■□□ 2.79
SURF1-205ENST00000615505 ISCA1Q9BUE6 129 aa32.51■■■□□ 2.79
SURF1-205ENST00000615505 ARFGEF1Q9Y6D6 1849 aa32.51■■■□□ 2.79
SURF1-205ENST00000615505 ABCC12Q96J65 1359 aa32.5■■■□□ 2.79
SURF1-205ENST00000615505 TRMT112Q9UI30 125 aaKnown RBP32.5■■■□□ 2.79
SURF1-205ENST00000615505 ATP5J2-PTCD1G3V325 749 aa32.49■■■□□ 2.79
SURF1-205ENST00000615505 SLFN5Q08AF3 891 aa32.49■■■□□ 2.79
SURF1-205ENST00000615505 TRIM28Q13263 835 aaKnown RBP32.48■■■□□ 2.79
SURF1-205ENST00000615505 RIC1Q4ADV7 1423 aa32.48■■■□□ 2.79
SURF1-205ENST00000615505 COL11A2P13942 1736 aaPredicted RBP32.48■■■□□ 2.79
SURF1-205ENST00000615505 SLC10A5Q5PT55 438 aa32.47■■■□□ 2.79
SURF1-205ENST00000615505 KSR2Q6VAB6 950 aa32.47■■■□□ 2.79
SURF1-205ENST00000615505 NLRP3Q96P20 1036 aa32.46■■■□□ 2.79
SURF1-205ENST00000615505 SH3TC1Q8TE82 1336 aa32.46■■■□□ 2.79
SURF1-205ENST00000615505 ARFGEF2Q9Y6D5 1785 aa32.45■■■□□ 2.79
SURF1-205ENST00000615505 CRY2Q49AN0 593 aa32.45■■■□□ 2.79
SURF1-205ENST00000615505 G2E3Q7L622 706 aa32.45■■■□□ 2.79
SURF1-205ENST00000615505 MYD88Q99836 296 aa32.45■■■□□ 2.79
SURF1-205ENST00000615505 METTL22Q9BUU2 404 aaPredicted RBP32.45■■■□□ 2.79
SURF1-205ENST00000615505 MAP3K2Q9Y2U5 619 aa32.45■■■□□ 2.79
SURF1-205ENST00000615505 PI4KAP2A4QPH2 592 aa32.44■■■□□ 2.78
SURF1-205ENST00000615505 ALDH1B1P30837 517 aa32.44■■■□□ 2.78
SURF1-205ENST00000615505 FLIIQ13045 1269 aa32.44■■■□□ 2.78
SURF1-205ENST00000615505 PRPF40BQ6NWY9 871 aaKnown RBP32.44■■■□□ 2.78
SURF1-205ENST00000615505 PI4KAP1Q8N8J0 262 aa32.44■■■□□ 2.78
SURF1-205ENST00000615505 RPGRQ92834 1020 aaKnown RBP32.43■■■□□ 2.78
SURF1-205ENST00000615505 CDCA7LQ96GN5 454 aa32.43■■■□□ 2.78
SURF1-205ENST00000615505 C21orf2O43822 256 aa32.41■■■□□ 2.78
SURF1-205ENST00000615505 NEXNQ0ZGT2 675 aa32.41■■■□□ 2.78
SURF1-205ENST00000615505 FKBP5Q13451 457 aaPredicted RBP32.41■■■□□ 2.78
SURF1-205ENST00000615505 CCDC191Q8NCU4 936 aa32.41■■■□□ 2.78
SURF1-205ENST00000615505 ZNF428Q96B54 188 aa32.41■■■□□ 2.78
SURF1-205ENST00000615505 ZNF219Q9P2Y4 722 aaPredicted RBP32.41■■■□□ 2.78
SURF1-205ENST00000615505 CACNA1FO60840 1977 aa32.41■■■□□ 2.78
SURF1-205ENST00000615505 SYNE4Q8N205 404 aa32.4■■■□□ 2.78
SURF1-205ENST00000615505 TNRC6CQ9HCJ0 1690 aaKnown RBP32.4■■■□□ 2.78
SURF1-205ENST00000615505 HCLS1P14317 486 aaPredicted RBP32.39■■■□□ 2.78
SURF1-205ENST00000615505 SOGA3Q5TF21 947 aa32.39■■■□□ 2.78
SURF1-205ENST00000615505 FAM89AQ96GI7 184 aa32.39■■■□□ 2.78
SURF1-205ENST00000615505 RBM17Q96I25 401 aaKnown RBP32.39■■■□□ 2.78
SURF1-205ENST00000615505 ADCY9O60503 1353 aa32.39■■■□□ 2.78
SURF1-205ENST00000615505 HOXA10P31260 410 aaPredicted RBP32.38■■■□□ 2.77
SURF1-205ENST00000615505 TRMT2AQ8IZ69 625 aaKnown RBP32.38■■■□□ 2.77
SURF1-205ENST00000615505 CWC25Q9NXE8 425 aaPredicted RBP32.38■■■□□ 2.77
SURF1-205ENST00000615505 C3orf67Q6ZVT6 689 aa32.36■■■□□ 2.77
SURF1-205ENST00000615505 ZBTB38Q8NAP3 1195 aaPredicted RBP32.36■■■□□ 2.77
SURF1-205ENST00000615505 CRAMP1Q96RY5 1269 aa32.36■■■□□ 2.77
SURF1-205ENST00000615505 SLX4Q8IY92 1834 aa32.35■■■□□ 2.77
SURF1-205ENST00000615505 HNRNPUQ00839 825 aaKnown RBP eCLIP32.35■■■□□ 2.77
SURF1-205ENST00000615505 ZNF784Q8NCA9 323 aaPredicted RBP32.35■■■□□ 2.77
SURF1-205ENST00000615505 HSP90B1P14625 803 aaKnown RBP32.34■■■□□ 2.77
SURF1-205ENST00000615505 RTL5Q5HYW3 569 aaPredicted RBP32.34■■■□□ 2.77
SURF1-205ENST00000615505 DNAAF4Q8WXU2 420 aa32.34■■■□□ 2.77
SURF1-205ENST00000615505 C9orf131Q5VYM1 1079 aa32.33■■■□□ 2.77
SURF1-205ENST00000615505 C7orf43Q8WVR3 580 aa32.33■■■□□ 2.77
SURF1-205ENST00000615505 CACNA1SQ13698 1873 aa32.32■■■□□ 2.76
SURF1-205ENST00000615505 IRS4O14654 1257 aaPredicted RBP32.32■■■□□ 2.76
SURF1-205ENST00000615505 PCCAP05165 728 aaPredicted RBP32.32■■■□□ 2.76
SURF1-205ENST00000615505 IGKV5-2P06315 115 aa32.32■■■□□ 2.76
SURF1-205ENST00000615505 RASSF7Q02833 373 aa32.31■■■□□ 2.76
SURF1-205ENST00000615505 CCDC93Q567U6 631 aa32.31■■■□□ 2.76
SURF1-205ENST00000615505 RNF181Q9P0P0 153 aa32.31■■■□□ 2.76
SURF1-205ENST00000615505 NFKBIEO00221 500 aa32.3■■■□□ 2.76
SURF1-205ENST00000615505 NEURL1BA8MQ27 555 aa32.29■■■□□ 2.76
SURF1-205ENST00000615505 CT47B1P0C2W7 299 aaPredicted RBP32.29■■■□□ 2.76
SURF1-205ENST00000615505 LMNB1P20700 586 aa32.29■■■□□ 2.76
SURF1-205ENST00000615505 DDX46Q7L014 1031 aaKnown RBP32.29■■■□□ 2.76
SURF1-205ENST00000615505 CWF19L2Q2TBE0 894 aaKnown RBP32.28■■■□□ 2.76
SURF1-205ENST00000615505 TAOK3Q9H2K8 898 aa32.28■■■□□ 2.76
SURF1-205ENST00000615505 SF3B3Q15393 1217 aaKnown RBP32.27■■■□□ 2.76
SURF1-205ENST00000615505 CC2D2BQ6DHV5 1058 aa32.27■■■□□ 2.76
SURF1-205ENST00000615505 RTKN2Q8IZC4 609 aa32.27■■■□□ 2.76
SURF1-205ENST00000615505 LINS1Q8NG48 757 aa32.27■■■□□ 2.76
SURF1-205ENST00000615505 LTBP3Q9NS15 1303 aa32.26■■■□□ 2.76
SURF1-205ENST00000615505 MRPL50Q8N5N7 158 aaKnown RBP32.26■■■□□ 2.75
SURF1-205ENST00000615505 TMX4Q9H1E5 349 aaPredicted RBP32.26■■■□□ 2.75
SURF1-205ENST00000615505 F6X3S4 739 aa32.25■■■□□ 2.75
SURF1-205ENST00000615505 PPEF1O14829 653 aaPredicted RBP32.25■■■□□ 2.75
SURF1-205ENST00000615505 ALDH1L2Q3SY69 923 aa32.25■■■□□ 2.75
SURF1-205ENST00000615505 SSH1Q8WYL5 1049 aa32.25■■■□□ 2.75
SURF1-205ENST00000615505 ABCC4O15439 1325 aa32.25■■■□□ 2.75
SURF1-205ENST00000615505 DDX60Q8IY21 1712 aaKnown RBP32.24■■■□□ 2.75
SURF1-205ENST00000615505 BBOX1O75936 387 aa32.24■■■□□ 2.75
SURF1-205ENST00000615505 JARID2Q92833 1246 aaPredicted RBP32.24■■■□□ 2.75
SURF1-205ENST00000615505 CDHR2Q9BYE9 1310 aa32.24■■■□□ 2.75
SURF1-205ENST00000615505 FER1L6Q2WGJ9 1857 aa32.23■■■□□ 2.75
SURF1-205ENST00000615505 LAMB2P55268 1798 aa32.23■■■□□ 2.75
SURF1-205ENST00000615505 PDE8AO60658 829 aa32.23■■■□□ 2.75
SURF1-205ENST00000615505 GCKRQ14397 625 aa32.23■■■□□ 2.75
SURF1-205ENST00000615505 GRIPAP1Q4V328 841 aa32.23■■■□□ 2.75
SURF1-205ENST00000615505 OLFM4Q6UX06 510 aa32.23■■■□□ 2.75
SURF1-205ENST00000615505 SBF1O95248 1867 aa32.23■■■□□ 2.75
SURF1-205ENST00000615505 GRAPQ13588 217 aa32.22■■■□□ 2.75
SURF1-205ENST00000615505 GRAPLQ8TC17 118 aaPredicted RBP32.22■■■□□ 2.75
SURF1-205ENST00000615505 PRELPP51888 382 aa32.21■■■□□ 2.75
SURF1-205ENST00000615505 FKBP4Q02790 459 aaKnown RBP eCLIP32.21■■■□□ 2.75
SURF1-205ENST00000615505 H7C1W4 665 aa32.2■■■□□ 2.75
SURF1-205ENST00000615505 BEND3Q5T5X7 828 aa32.2■■■□□ 2.75
SURF1-205ENST00000615505 SMC4Q9NTJ3 1288 aa32.2■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms