RNA–Protein interactions for RNA: ENST00000615043.1

PCDH15-228, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-228ENST00000615043 FYB1O15117 783 aa12.87□□□□□ -0.35
PCDH15-228ENST00000615043 XPCQ01831 940 aaPredicted RBP12.87□□□□□ -0.35
PCDH15-228ENST00000615043 MORC1Q86VD1 984 aa12.87□□□□□ -0.35
PCDH15-228ENST00000615043 ZMIZ1Q9ULJ6 1067 aa12.87□□□□□ -0.35
PCDH15-228ENST00000615043 NHSL1Q5SYE7 1610 aa12.87□□□□□ -0.35
PCDH15-228ENST00000615043 TTC21AQ8NDW8 1320 aa12.87□□□□□ -0.35
PCDH15-228ENST00000615043 MYBBP1AQ9BQG0 1328 aaKnown RBP12.87□□□□□ -0.35
PCDH15-228ENST00000615043 TMEM164Q5U3C3 297 aa12.86□□□□□ -0.35
PCDH15-228ENST00000615043 NOVA2Q9UNW9 492 aaKnown RBP12.86□□□□□ -0.35
PCDH15-228ENST00000615043 NPHP3Q7Z494 1330 aa12.86□□□□□ -0.35
PCDH15-228ENST00000615043 PXDNQ92626 1479 aa12.85□□□□□ -0.35
PCDH15-228ENST00000615043 KRT28Q7Z3Y7 464 aa12.85□□□□□ -0.35
PCDH15-228ENST00000615043 RNF135Q8IUD6 432 aa12.85□□□□□ -0.35
PCDH15-228ENST00000615043 STK32AQ8WU08 396 aa12.85□□□□□ -0.35
PCDH15-228ENST00000615043 DDX17Q92841 729 aaKnown RBP12.85□□□□□ -0.35
PCDH15-228ENST00000615043 MKRN1Q9UHC7 482 aaKnown RBP12.85□□□□□ -0.35
PCDH15-228ENST00000615043 USP54Q70EL1 1684 aa12.85□□□□□ -0.35
PCDH15-228ENST00000615043 OVOS2A0A0J9YW53 1432 aa12.85□□□□□ -0.35
PCDH15-228ENST00000615043 OVOS2Q6IE36 1432 aa12.85□□□□□ -0.35
PCDH15-228ENST00000615043 CCER2I3L3R5 266 aa12.84□□□□□ -0.35
PCDH15-228ENST00000615043 TNNT2P45379 298 aaPredicted RBP12.84□□□□□ -0.35
PCDH15-228ENST00000615043 B4GALNT3Q6L9W6 998 aa12.84□□□□□ -0.35
PCDH15-228ENST00000615043 COG3Q96JB2 828 aa12.84□□□□□ -0.35
PCDH15-228ENST00000615043 MARF1Q9Y4F3 1742 aaKnown RBP12.84□□□□□ -0.35
PCDH15-228ENST00000615043 ALS2Q96Q42 1657 aa12.83□□□□□ -0.35
PCDH15-228ENST00000615043 FAM196BA6NMK8 535 aa12.83□□□□□ -0.36
PCDH15-228ENST00000615043 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
PCDH15-228ENST00000615043 LCE2DQ5TA82 110 aaPredicted RBP12.83□□□□□ -0.36
PCDH15-228ENST00000615043 THSD4Q6ZMP0 1018 aa12.83□□□□□ -0.36
PCDH15-228ENST00000615043 PHTF2Q8N3S3 785 aa12.83□□□□□ -0.36
PCDH15-228ENST00000615043 ADAM32Q8TC27 787 aa12.83□□□□□ -0.36
PCDH15-228ENST00000615043 ARHGAP9Q9BRR9 750 aa12.83□□□□□ -0.36
PCDH15-228ENST00000615043 SBNO1A3KN83 1393 aa12.82□□□□□ -0.36
PCDH15-228ENST00000615043 USP31Q70CQ4 1352 aa12.82□□□□□ -0.36
PCDH15-228ENST00000615043 TNS3Q68CZ2 1445 aa12.82□□□□□ -0.36
PCDH15-228ENST00000615043 TLL1O43897 1013 aa12.82□□□□□ -0.36
PCDH15-228ENST00000615043 TOM1O60784 492 aa12.82□□□□□ -0.36
PCDH15-228ENST00000615043 ADH1BP00325 375 aa12.82□□□□□ -0.36
PCDH15-228ENST00000615043 NCOA4Q13772 614 aa12.82□□□□□ -0.36
PCDH15-228ENST00000615043 NLRP13Q86W25 1043 aa12.82□□□□□ -0.36
PCDH15-228ENST00000615043 ABTB2Q8N961 1025 aa12.82□□□□□ -0.36
PCDH15-228ENST00000615043 PLPP7Q8NBV4 271 aa12.82□□□□□ -0.36
PCDH15-228ENST00000615043 AHDC1Q5TGY3 1603 aaPredicted RBP12.81□□□□□ -0.36
PCDH15-228ENST00000615043 USP17L15C9J2P7 530 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 USP17L10C9JJH3 530 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 USP17L13C9JLJ4 530 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 USP17L12C9JPN9 530 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 USP17L11C9JVI0 530 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 USP17L21D6R901 530 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 USP17L18D6R9N7 530 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 USP17L22D6RA61 530 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 USP17L17D6RBQ6 530 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 USP17L19D6RCP7 530 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 USP17L20D6RJB6 530 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 UBAP1LF5GYI3 381 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 ZPR1O75312 459 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 USP17L24Q0WX57 530 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 CRTC2Q53ET0 693 aaPredicted RBP12.81□□□□□ -0.36
PCDH15-228ENST00000615043 NUTM2GQ5VZR2 741 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 LARP1Q6PKG0 1096 aaKnown RBP12.81□□□□□ -0.36
PCDH15-228ENST00000615043 CCDC24Q8N4L8 307 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 UNC93B1Q9H1C4 597 aa12.81□□□□□ -0.36
PCDH15-228ENST00000615043 ATP5J2-PTCD1G3V325 749 aa12.8□□□□□ -0.36
PCDH15-228ENST00000615043 LZTS3O60299 673 aaPredicted RBP12.8□□□□□ -0.36
PCDH15-228ENST00000615043 RASA1P20936 1047 aa12.8□□□□□ -0.36
PCDH15-228ENST00000615043 PIP4K2BP78356 416 aa12.8□□□□□ -0.36
PCDH15-228ENST00000615043 ZBTB33Q86T24 672 aa12.8□□□□□ -0.36
PCDH15-228ENST00000615043 MRS2Q9HD23 443 aa12.8□□□□□ -0.36
PCDH15-228ENST00000615043 CCDC184Q52MB2 194 aa12.79□□□□□ -0.36
PCDH15-228ENST00000615043 SOS2Q07890 1332 aaPredicted RBP12.79□□□□□ -0.36
PCDH15-228ENST00000615043 PHLPP1O60346 1717 aa12.79□□□□□ -0.36
PCDH15-228ENST00000615043 PTK7Q13308 1070 aa12.78□□□□□ -0.36
PCDH15-228ENST00000615043 FOXD4L5Q5VV16 416 aaPredicted RBP12.78□□□□□ -0.36
PCDH15-228ENST00000615043 PTCRAQ6ISU1 281 aaPredicted RBP12.78□□□□□ -0.36
PCDH15-228ENST00000615043 SND1Q7KZF4 910 aaKnown RBP eCLIP12.78□□□□□ -0.36
PCDH15-228ENST00000615043 SH3BP5LQ7L8J4 393 aa12.78□□□□□ -0.36
PCDH15-228ENST00000615043 FOXD4L4Q8WXT5 416 aaPredicted RBP12.78□□□□□ -0.36
PCDH15-228ENST00000615043 GNEQ9Y223 722 aaKnown RBP12.78□□□□□ -0.36
PCDH15-228ENST00000615043 SPATA31A3Q5VYP0 1347 aa12.78□□□□□ -0.36
PCDH15-228ENST00000615043 SLIT3O75094 1523 aa12.78□□□□□ -0.36
PCDH15-228ENST00000615043 PHRF1Q9P1Y6 1649 aaKnown RBP12.77□□□□□ -0.36
PCDH15-228ENST00000615043 MAP7D1Q3KQU3 841 aa12.77□□□□□ -0.37
PCDH15-228ENST00000615043 NYAP1Q6ZVC0 841 aa12.77□□□□□ -0.37
PCDH15-228ENST00000615043 KCTD12Q96CX2 325 aaKnown RBP12.77□□□□□ -0.37
PCDH15-228ENST00000615043 ARHGEF10O15013 1369 aa12.77□□□□□ -0.37
PCDH15-228ENST00000615043 AATKQ6ZMQ8 1374 aa12.77□□□□□ -0.37
PCDH15-228ENST00000615043 MED1Q15648 1581 aaPredicted RBP12.77□□□□□ -0.37
PCDH15-228ENST00000615043 MAP2P11137 1827 aaKnown RBP12.76□□□□□ -0.37
PCDH15-228ENST00000615043 FBLN1P23142 703 aa12.76□□□□□ -0.37
PCDH15-228ENST00000615043 CCDC27Q2M243 656 aa12.76□□□□□ -0.37
PCDH15-228ENST00000615043 EML3Q32P44 896 aa12.76□□□□□ -0.37
PCDH15-228ENST00000615043 DZIP3Q86Y13 1208 aaKnown RBP12.76□□□□□ -0.37
PCDH15-228ENST00000615043 FAM200AQ8TCP9 573 aa12.76□□□□□ -0.37
PCDH15-228ENST00000615043 MTRQ99707 1265 aa12.76□□□□□ -0.37
PCDH15-228ENST00000615043 USP19O94966 1318 aa12.76□□□□□ -0.37
PCDH15-228ENST00000615043 SMG6Q86US8 1419 aaKnown RBP12.76□□□□□ -0.37
PCDH15-228ENST00000615043 NFAT5O94916 1531 aa12.76□□□□□ -0.37
PCDH15-228ENST00000615043 COL16A1Q07092 1604 aaPredicted RBP12.76□□□□□ -0.37
PCDH15-228ENST00000615043 CRYBG1Q9Y4K1 1723 aa12.76□□□□□ -0.37
PCDH15-228ENST00000615043 LTN1O94822 1766 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms