RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 CCAR2Q8N163 923 aaKnown RBP14.79□□□□□ -0.04
MSH6-213ENST00000614496 DEPDC5O75140 1603 aa14.79□□□□□ -0.04
MSH6-213ENST00000614496 ALKQ9UM73 1620 aa14.79□□□□□ -0.04
MSH6-213ENST00000614496 KRT32Q14532 448 aa14.79□□□□□ -0.04
MSH6-213ENST00000614496 ME3Q16798 604 aa14.79□□□□□ -0.04
MSH6-213ENST00000614496 ZC3H13Q5T200 1668 aaKnown RBP14.78□□□□□ -0.04
MSH6-213ENST00000614496 TTC41PQ6P2S7 1318 aa14.78□□□□□ -0.04
MSH6-213ENST00000614496 NEK1Q96PY6 1258 aa14.78□□□□□ -0.04
MSH6-213ENST00000614496 ARHGEF40Q8TER5 1519 aa14.78□□□□□ -0.04
MSH6-213ENST00000614496 IGSF3O75054 1194 aa14.78□□□□□ -0.04
MSH6-213ENST00000614496 CDC37L1Q7L3B6 337 aa14.78□□□□□ -0.04
MSH6-213ENST00000614496 PIBF1Q8WXW3 757 aa14.78□□□□□ -0.04
MSH6-213ENST00000614496 BICC1Q9H694 974 aaKnown RBP14.78□□□□□ -0.04
MSH6-213ENST00000614496 ATP10DQ9P241 1426 aa14.78□□□□□ -0.04
MSH6-213ENST00000614496 ZNF396Q96N95 335 aaPredicted RBP14.78□□□□□ -0.04
MSH6-213ENST00000614496 DDX19AQ9NUU7 478 aaKnown RBP14.78□□□□□ -0.04
MSH6-213ENST00000614496 HYPKQ9NX55 129 aa14.78□□□□□ -0.04
MSH6-213ENST00000614496 RGS12O14924 1447 aa14.78□□□□□ -0.04
MSH6-213ENST00000614496 KCNA6P17658 529 aa14.77□□□□□ -0.04
MSH6-213ENST00000614496 LSG1Q9H089 658 aaKnown RBP14.77□□□□□ -0.04
MSH6-213ENST00000614496 NBPF6Q5VWK0 638 aa14.77□□□□□ -0.05
MSH6-213ENST00000614496 NBPF4Q96M43 638 aa14.77□□□□□ -0.05
MSH6-213ENST00000614496 NAT10Q9H0A0 1025 aaKnown RBP14.77□□□□□ -0.05
MSH6-213ENST00000614496 IL25Q9H293 177 aa14.77□□□□□ -0.05
MSH6-213ENST00000614496 CPSF1Q10570 1443 aaKnown RBP14.77□□□□□ -0.05
MSH6-213ENST00000614496 ARHGAP31Q2M1Z3 1444 aa14.77□□□□□ -0.05
MSH6-213ENST00000614496 A0A087WZG4 1122 aa14.77□□□□□ -0.05
MSH6-213ENST00000614496 TATP17735 454 aaPredicted RBP14.77□□□□□ -0.05
MSH6-213ENST00000614496 CCDC129Q6ZRS4 1044 aa14.77□□□□□ -0.05
MSH6-213ENST00000614496 COPS6Q7L5N1 327 aa14.77□□□□□ -0.05
MSH6-213ENST00000614496 XAGE3Q8WTP9 111 aa14.77□□□□□ -0.05
MSH6-213ENST00000614496 PDLIM2Q96JY6 352 aa14.77□□□□□ -0.05
MSH6-213ENST00000614496 MTMR6Q9Y217 621 aa14.77□□□□□ -0.05
MSH6-213ENST00000614496 MROH1Q8NDA8 1641 aa14.77□□□□□ -0.05
MSH6-213ENST00000614496 GOLIM4O00461 696 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 ATP2B1P20020 1258 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 EIF4A1P60842 406 aaKnown RBP14.76□□□□□ -0.05
MSH6-213ENST00000614496 Q6ZUG5 572 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 CHST3Q7LGC8 479 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 ARHGEF10O15013 1369 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 LIG1P18858 919 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 TRDNQ13061 729 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 KCNH5Q8NCM2 988 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 CD163L1Q9NR16 1453 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 ADGRB2O60241 1585 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 BIN1O00499 593 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 SLC27A2O14975 620 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 AMOTQ4VCS5 1084 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 NFXL1Q6ZNB6 911 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 AOX1Q06278 1338 aa14.76□□□□□ -0.05
MSH6-213ENST00000614496 ISM2Q6H9L7 571 aa14.75□□□□□ -0.05
MSH6-213ENST00000614496 ANKRD24Q8TF21 1146 aa14.75□□□□□ -0.05
MSH6-213ENST00000614496 SNRKQ9NRH2 765 aa14.75□□□□□ -0.05
MSH6-213ENST00000614496 MYO3AQ8NEV4 1616 aa14.75□□□□□ -0.05
MSH6-213ENST00000614496 ALDH1L1O75891 902 aa14.75□□□□□ -0.05
MSH6-213ENST00000614496 CCAR1Q8IX12 1150 aaKnown RBP14.75□□□□□ -0.05
MSH6-213ENST00000614496 CEP57L1Q8IYX8 460 aa14.75□□□□□ -0.05
MSH6-213ENST00000614496 FAM177A1Q8N128 213 aaPredicted RBP14.75□□□□□ -0.05
MSH6-213ENST00000614496 FSIP1Q8NA03 581 aa14.75□□□□□ -0.05
MSH6-213ENST00000614496 LINS1Q8NG48 757 aa14.75□□□□□ -0.05
MSH6-213ENST00000614496 SUCLG2Q96I99 432 aa14.75□□□□□ -0.05
MSH6-213ENST00000614496 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.75□□□□□ -0.05
MSH6-213ENST00000614496 TPCN1Q9ULQ1 816 aa14.75□□□□□ -0.05
MSH6-213ENST00000614496 V9GYY5 206 aaPredicted RBP14.75□□□□□ -0.05
MSH6-213ENST00000614496 CDK11BP21127 795 aaKnown RBP14.74□□□□□ -0.05
MSH6-213ENST00000614496 TERF1P54274 439 aa14.74□□□□□ -0.05
MSH6-213ENST00000614496 HAND2P61296 217 aa14.74□□□□□ -0.05
MSH6-213ENST00000614496 MYRIPQ8NFW9 859 aa14.74□□□□□ -0.05
MSH6-213ENST00000614496 PPLO60437 1756 aa14.74□□□□□ -0.05
MSH6-213ENST00000614496 JAK2O60674 1132 aa14.74□□□□□ -0.05
MSH6-213ENST00000614496 BEND3Q5T5X7 828 aa14.74□□□□□ -0.05
MSH6-213ENST00000614496 CABP4P57796 275 aa14.74□□□□□ -0.05
MSH6-213ENST00000614496 AKAP4Q5JQC9 854 aa14.74□□□□□ -0.05
MSH6-213ENST00000614496 CPLX2Q6PUV4 134 aaKnown RBP14.74□□□□□ -0.05
MSH6-213ENST00000614496 TTC6Q86TZ1 520 aa14.74□□□□□ -0.05
MSH6-213ENST00000614496 PI4K2BQ8TCG2 481 aa14.74□□□□□ -0.05
MSH6-213ENST00000614496 EAF2Q96CJ1 260 aaPredicted RBP14.74□□□□□ -0.05
MSH6-213ENST00000614496 RIOK3O14730 519 aaKnown RBP14.73□□□□□ -0.05
MSH6-213ENST00000614496 POLR3DP05423 398 aaPredicted RBP14.73□□□□□ -0.05
MSH6-213ENST00000614496 PTPN14Q15678 1187 aa14.73□□□□□ -0.05
MSH6-213ENST00000614496 PROSER3Q2NL68 480 aa14.73□□□□□ -0.05
MSH6-213ENST00000614496 PDILTQ8N807 584 aa14.73□□□□□ -0.05
MSH6-213ENST00000614496 IGSF1Q8N6C5 1336 aa14.73□□□□□ -0.05
MSH6-213ENST00000614496 SSH2Q76I76 1423 aa14.73□□□□□ -0.05
MSH6-213ENST00000614496 CPS1P31327 1500 aa14.73□□□□□ -0.05
MSH6-213ENST00000614496 A0A0D9SFI3 127 aa14.73□□□□□ -0.05
MSH6-213ENST00000614496 TRIM29Q14134 588 aa14.73□□□□□ -0.05
MSH6-213ENST00000614496 PYCARDQ9ULZ3 195 aa14.73□□□□□ -0.05
MSH6-213ENST00000614496 U3KPZ7 1027 aaPredicted RBP14.73□□□□□ -0.05
MSH6-213ENST00000614496 PRAMEF22A3QJZ6 481 aa14.72□□□□□ -0.05
MSH6-213ENST00000614496 NPHP3Q7Z494 1330 aa14.72□□□□□ -0.05
MSH6-213ENST00000614496 LRMPQ12912 555 aa14.72□□□□□ -0.05
MSH6-213ENST00000614496 LRRFIP1Q32MZ4 808 aaKnown RBP14.72□□□□□ -0.05
MSH6-213ENST00000614496 CHMP4CQ96CF2 233 aa14.72□□□□□ -0.05
MSH6-213ENST00000614496 USP6P35125 1406 aa14.72□□□□□ -0.05
MSH6-213ENST00000614496 PIK3C2BO00750 1634 aa14.72□□□□□ -0.05
MSH6-213ENST00000614496 TMEM2Q9UHN6 1383 aa14.72□□□□□ -0.05
MSH6-213ENST00000614496 ANKRD13DQ6ZTN6 518 aa14.72□□□□□ -0.05
MSH6-213ENST00000614496 PROSER2Q86WR7 435 aaPredicted RBP14.72□□□□□ -0.05
MSH6-213ENST00000614496 CBX8Q9HC52 389 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms