RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 SUPT20HQ8NEM7 779 aa9.49□□□□□ -0.89
TARDBP-216ENST00000614494 RBM17Q96I25 401 aaKnown RBP9.49□□□□□ -0.89
TARDBP-216ENST00000614494 CRAMP1Q96RY5 1269 aa9.49□□□□□ -0.89
TARDBP-216ENST00000614494 PLEKHF1Q96S99 279 aa9.49□□□□□ -0.89
TARDBP-216ENST00000614494 HACL1Q9UJ83 578 aa9.49□□□□□ -0.89
TARDBP-216ENST00000614494 HOXB7P09629 217 aa9.48□□□□□ -0.89
TARDBP-216ENST00000614494 HSP90B1P14625 803 aaKnown RBP9.48□□□□□ -0.89
TARDBP-216ENST00000614494 LMOD1P29536 600 aaPredicted RBP9.48□□□□□ -0.89
TARDBP-216ENST00000614494 IARSP41252 1262 aaKnown RBP9.48□□□□□ -0.89
TARDBP-216ENST00000614494 PRELPP51888 382 aa9.48□□□□□ -0.89
TARDBP-216ENST00000614494 EIF6P56537 245 aaKnown RBP9.48□□□□□ -0.89
TARDBP-216ENST00000614494 DCTN1Q14203 1278 aa9.48□□□□□ -0.89
TARDBP-216ENST00000614494 GIGYF2Q6Y7W6 1299 aaKnown RBP9.48□□□□□ -0.89
TARDBP-216ENST00000614494 TSPYL4Q9UJ04 414 aa9.48□□□□□ -0.89
TARDBP-216ENST00000614494 CDHR2Q9BYE9 1310 aa9.48□□□□□ -0.89
TARDBP-216ENST00000614494 SLX4Q8IY92 1834 aa9.47□□□□□ -0.89
TARDBP-216ENST00000614494 FZD9O00144 591 aa9.47□□□□□ -0.89
TARDBP-216ENST00000614494 CALD1Q05682 793 aaKnown RBP9.47□□□□□ -0.89
TARDBP-216ENST00000614494 NLRP3Q96P20 1036 aa9.47□□□□□ -0.89
TARDBP-216ENST00000614494 TAF1DQ9H5J8 278 aaPredicted RBP9.47□□□□□ -0.89
TARDBP-216ENST00000614494 PRAMEF22A3QJZ6 481 aa9.46□□□□□ -0.9
TARDBP-216ENST00000614494 POTECB2RU33 542 aa9.46□□□□□ -0.9
TARDBP-216ENST00000614494 DDNO94850 711 aaPredicted RBP9.46□□□□□ -0.9
TARDBP-216ENST00000614494 ZNF34Q8IZ26 560 aa9.46□□□□□ -0.9
TARDBP-216ENST00000614494 CCDC24Q8N4L8 307 aa9.46□□□□□ -0.9
TARDBP-216ENST00000614494 RRP7AQ9Y3A4 280 aaKnown RBP9.46□□□□□ -0.9
TARDBP-216ENST00000614494 MYBBP1AQ9BQG0 1328 aaKnown RBP9.46□□□□□ -0.9
TARDBP-216ENST00000614494 CCDC88AQ3V6T2 1871 aa9.46□□□□□ -0.9
TARDBP-216ENST00000614494 TMEM88BA6NKF7 163 aa9.45□□□□□ -0.9
TARDBP-216ENST00000614494 PITPNM1O00562 1244 aa9.45□□□□□ -0.9
TARDBP-216ENST00000614494 PPEF1O14829 653 aaPredicted RBP9.45□□□□□ -0.9
TARDBP-216ENST00000614494 BBOX1O75936 387 aa9.45□□□□□ -0.9
TARDBP-216ENST00000614494 MYL6BP14649 208 aa9.45□□□□□ -0.9
TARDBP-216ENST00000614494 EPHX2P34913 555 aa9.45□□□□□ -0.9
TARDBP-216ENST00000614494 PIP4K2AP48426 406 aaPredicted RBP9.45□□□□□ -0.9
TARDBP-216ENST00000614494 RIPK4P57078 832 aa9.45□□□□□ -0.9
TARDBP-216ENST00000614494 WDR43Q15061 677 aaKnown RBP eCLIP9.45□□□□□ -0.9
TARDBP-216ENST00000614494 HLFQ16534 295 aa9.45□□□□□ -0.9
TARDBP-216ENST00000614494 SYNE4Q8N205 404 aa9.45□□□□□ -0.9
TARDBP-216ENST00000614494 AIDAQ96BJ3 306 aa9.45□□□□□ -0.9
TARDBP-216ENST00000614494 UTP14AQ9BVJ6 771 aaKnown RBP9.45□□□□□ -0.9
TARDBP-216ENST00000614494 ZNF277Q9NRM2 450 aaPredicted RBP9.45□□□□□ -0.9
TARDBP-216ENST00000614494 PASKQ96RG2 1323 aa9.45□□□□□ -0.9
TARDBP-216ENST00000614494 CNTNAP1P78357 1384 aa9.45□□□□□ -0.9
TARDBP-216ENST00000614494 ABCC12Q96J65 1359 aa9.45□□□□□ -0.9
TARDBP-216ENST00000614494 SNED1Q8TER0 1413 aa9.45□□□□□ -0.9
TARDBP-216ENST00000614494 DLG5Q8TDM6 1919 aa9.44□□□□□ -0.9
TARDBP-216ENST00000614494 NTSR2O95665 410 aa9.44□□□□□ -0.9
TARDBP-216ENST00000614494 HSPA1AP0DMV8 641 aaKnown RBP9.44□□□□□ -0.9
TARDBP-216ENST00000614494 HSPA1BP0DMV9 641 aaKnown RBP9.44□□□□□ -0.9
TARDBP-216ENST00000614494 SLC10A5Q5PT55 438 aa9.44□□□□□ -0.9
TARDBP-216ENST00000614494 USP50Q70EL3 339 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-216ENST00000614494 NIM1KQ8IY84 436 aa9.44□□□□□ -0.9
TARDBP-216ENST00000614494 TNS4Q8IZW8 715 aa9.44□□□□□ -0.9
TARDBP-216ENST00000614494 LARGE2Q8N3Y3 721 aa9.44□□□□□ -0.9
TARDBP-216ENST00000614494 ZBTB3Q9H5J0 574 aa9.44□□□□□ -0.9
TARDBP-216ENST00000614494 CACNA1SQ13698 1873 aa9.44□□□□□ -0.9
TARDBP-216ENST00000614494 NUP98P52948 1817 aa9.43□□□□□ -0.9
TARDBP-216ENST00000614494 UBN2Q6ZU65 1347 aa9.43□□□□□ -0.9
TARDBP-216ENST00000614494 SH3TC1Q8TE82 1336 aa9.43□□□□□ -0.9
TARDBP-216ENST00000614494 FAM177BA6PVY3 158 aa9.43□□□□□ -0.9
TARDBP-216ENST00000614494 TMPOP42166 694 aaKnown RBP9.43□□□□□ -0.9
TARDBP-216ENST00000614494 EAPPQ56P03 285 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-216ENST00000614494 RUNDC1Q96C34 613 aa9.43□□□□□ -0.9
TARDBP-216ENST00000614494 DDX21Q9NR30 783 aaKnown RBP eCLIP9.43□□□□□ -0.9
TARDBP-216ENST00000614494 MIS18AQ9NYP9 233 aa9.43□□□□□ -0.9
TARDBP-216ENST00000614494 DBF4Q9UBU7 674 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-216ENST00000614494 CLEC11AQ9Y240 323 aa9.43□□□□□ -0.9
TARDBP-216ENST00000614494 ATP6V0A2Q9Y487 856 aa9.43□□□□□ -0.9
TARDBP-216ENST00000614494 ADAMTSL1Q8N6G6 1762 aa9.42□□□□□ -0.9
TARDBP-216ENST00000614494 ZNF541Q9H0D2 1346 aa9.42□□□□□ -0.9
TARDBP-216ENST00000614494 ZBTB22O15209 634 aa9.42□□□□□ -0.9
TARDBP-216ENST00000614494 GPTP24298 496 aa9.42□□□□□ -0.9
TARDBP-216ENST00000614494 ECE1P42892 770 aa9.42□□□□□ -0.9
TARDBP-216ENST00000614494 HTRA3P83110 453 aa9.42□□□□□ -0.9
TARDBP-216ENST00000614494 MAP2K1Q02750 393 aaPredicted RBP9.42□□□□□ -0.9
TARDBP-216ENST00000614494 TNIP1Q15025 636 aa9.42□□□□□ -0.9
TARDBP-216ENST00000614494 SUSD4Q5VX71 490 aa9.42□□□□□ -0.9
TARDBP-216ENST00000614494 TTLL7Q6ZT98 887 aa9.42□□□□□ -0.9
TARDBP-216ENST00000614494 DDX46Q7L014 1031 aaKnown RBP9.42□□□□□ -0.9
TARDBP-216ENST00000614494 NUTM1Q86Y26 1132 aa9.42□□□□□ -0.9
TARDBP-216ENST00000614494 NGEFQ8N5V2 710 aa9.42□□□□□ -0.9
TARDBP-216ENST00000614494 RTFDC1Q9BY42 306 aaPredicted RBP9.42□□□□□ -0.9
TARDBP-216ENST00000614494 PRDM10Q9NQV6 1147 aa9.42□□□□□ -0.9
TARDBP-216ENST00000614494 HYPKQ9NX55 129 aa9.42□□□□□ -0.9
TARDBP-216ENST00000614494 RASSF10A6NK89 507 aa9.41□□□□□ -0.9
TARDBP-216ENST00000614494 CHL1O00533 1208 aa9.41□□□□□ -0.9
TARDBP-216ENST00000614494 PPIP5K2O43314 1243 aa9.41□□□□□ -0.9
TARDBP-216ENST00000614494 ITGBL1O95965 494 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-216ENST00000614494 DPP8Q6V1X1 898 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-216ENST00000614494 SP8Q8IXZ3 490 aa9.41□□□□□ -0.9
TARDBP-216ENST00000614494 CNTROBQ8N137 903 aa9.41□□□□□ -0.9
TARDBP-216ENST00000614494 ZC3H15Q8WU90 426 aaKnown RBP9.41□□□□□ -0.9
TARDBP-216ENST00000614494 ZNRF3Q9ULT6 936 aa9.41□□□□□ -0.9
TARDBP-216ENST00000614494 ANKRD36CQ5JPF3 1778 aa9.4□□□□□ -0.9
TARDBP-216ENST00000614494 EIF2S2P20042 333 aaKnown RBP9.4□□□□□ -0.9
TARDBP-216ENST00000614494 CTCFP49711 727 aaPredicted RBP9.4□□□□□ -0.9
TARDBP-216ENST00000614494 TCIRG1Q13488 830 aa9.4□□□□□ -0.9
TARDBP-216ENST00000614494 PDIA6Q15084 440 aa9.4□□□□□ -0.9
TARDBP-216ENST00000614494 HDGFL1Q5TGJ6 251 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms