RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 MICAL2O94851 1124 aa9.74□□□□□ -0.85
SCAMP1-205ENST00000614488 INPP5BP32019 993 aa9.74□□□□□ -0.85
SCAMP1-205ENST00000614488 ARSDP51689 593 aa9.74□□□□□ -0.85
SCAMP1-205ENST00000614488 PHLDB3Q6NSJ2 640 aa9.74□□□□□ -0.85
SCAMP1-205ENST00000614488 SEPT3Q9UH03 358 aa9.74□□□□□ -0.85
SCAMP1-205ENST00000614488 MTMR7Q9Y216 660 aa9.74□□□□□ -0.85
SCAMP1-205ENST00000614488 ADH6P28332 368 aa9.73□□□□□ -0.85
SCAMP1-205ENST00000614488 SPEM2Q0P670 501 aa9.73□□□□□ -0.85
SCAMP1-205ENST00000614488 TREML1Q86YW5 311 aa9.73□□□□□ -0.85
SCAMP1-205ENST00000614488 C11orf16Q9NQ32 467 aa9.73□□□□□ -0.85
SCAMP1-205ENST00000614488 PRR12Q9ULL5 1215 aa9.73□□□□□ -0.85
SCAMP1-205ENST00000614488 OIP5O43482 229 aa9.72□□□□□ -0.85
SCAMP1-205ENST00000614488 ARHGEF15O94989 841 aa9.72□□□□□ -0.85
SCAMP1-205ENST00000614488 HELQQ8TDG4 1101 aa9.72□□□□□ -0.85
SCAMP1-205ENST00000614488 EFCC1Q9HA90 598 aa9.72□□□□□ -0.85
SCAMP1-205ENST00000614488 GGA1Q9UJY5 639 aa9.72□□□□□ -0.85
SCAMP1-205ENST00000614488 NEUROD1Q13562 356 aa9.71□□□□□ -0.86
SCAMP1-205ENST00000614488 ETFBKMTQ8IXQ9 262 aa9.71□□□□□ -0.86
SCAMP1-205ENST00000614488 ABTB2Q8N961 1025 aa9.71□□□□□ -0.86
SCAMP1-205ENST00000614488 SLC30A3Q99726 388 aa9.71□□□□□ -0.86
SCAMP1-205ENST00000614488 ENAMQ9NRM1 1142 aa9.71□□□□□ -0.86
SCAMP1-205ENST00000614488 STIM2Q9P246 746 aa9.71□□□□□ -0.86
SCAMP1-205ENST00000614488 GRIN2CQ14957 1233 aa9.7□□□□□ -0.86
SCAMP1-205ENST00000614488 NEURL1BA8MQ27 555 aa9.69□□□□□ -0.86
SCAMP1-205ENST00000614488 SIN3BO75182 1162 aa9.69□□□□□ -0.86
SCAMP1-205ENST00000614488 GRNP28799 593 aaKnown RBP9.69□□□□□ -0.86
SCAMP1-205ENST00000614488 SCNN1AP37088 669 aa9.69□□□□□ -0.86
SCAMP1-205ENST00000614488 KLF15Q9UIH9 416 aa9.69□□□□□ -0.86
SCAMP1-205ENST00000614488 OPLAHO14841 1288 aa9.68□□□□□ -0.86
SCAMP1-205ENST00000614488 EPXP11678 715 aa9.68□□□□□ -0.86
SCAMP1-205ENST00000614488 SYT9Q86SS6 491 aa9.68□□□□□ -0.86
SCAMP1-205ENST00000614488 FCHSD1Q86WN1 690 aa9.68□□□□□ -0.86
SCAMP1-205ENST00000614488 GTF3C2Q8WUA4 911 aaPredicted RBP9.68□□□□□ -0.86
SCAMP1-205ENST00000614488 EDARADDQ8WWZ3 215 aa9.68□□□□□ -0.86
SCAMP1-205ENST00000614488 FAM13BQ9NYF5 915 aa9.68□□□□□ -0.86
SCAMP1-205ENST00000614488 DNMT3AQ9Y6K1 912 aaPredicted RBP9.68□□□□□ -0.86
SCAMP1-205ENST00000614488 PCBP4P57723 403 aaKnown RBP9.67□□□□□ -0.86
SCAMP1-205ENST00000614488 CCINQ13939 588 aa9.67□□□□□ -0.86
SCAMP1-205ENST00000614488 FAM26DQ5JW98 314 aa9.67□□□□□ -0.86
SCAMP1-205ENST00000614488 C1orf229Q6ZS94 237 aaPredicted RBP9.67□□□□□ -0.86
SCAMP1-205ENST00000614488 GALNT6Q8NCL4 622 aa9.67□□□□□ -0.86
SCAMP1-205ENST00000614488 GSX2Q9BZM3 304 aa9.67□□□□□ -0.86
SCAMP1-205ENST00000614488 RTCBQ9Y3I0 505 aaKnown RBP9.67□□□□□ -0.86
SCAMP1-205ENST00000614488 TNFRSF25Q93038 417 aa9.66□□□□□ -0.86
SCAMP1-205ENST00000614488 ADAMTS8Q9UP79 889 aa9.66□□□□□ -0.86
SCAMP1-205ENST00000614488 SHISA8B8ZZ34 492 aa9.65□□□□□ -0.86
SCAMP1-205ENST00000614488 EGFRP00533 1210 aa9.65□□□□□ -0.86
SCAMP1-205ENST00000614488 ARID4AP29374 1257 aaPredicted RBP9.65□□□□□ -0.86
SCAMP1-205ENST00000614488 ZAP70P43403 619 aa9.65□□□□□ -0.86
SCAMP1-205ENST00000614488 RAB44Q7Z6P3 723 aaPredicted RBP9.65□□□□□ -0.86
SCAMP1-205ENST00000614488 RGL4Q8IZJ4 473 aa9.65□□□□□ -0.86
SCAMP1-205ENST00000614488 BHMTQ93088 406 aa9.65□□□□□ -0.86
SCAMP1-205ENST00000614488 MDFIQ99750 246 aa9.65□□□□□ -0.86
SCAMP1-205ENST00000614488 ADARB2-AS1A8MUL3 147 aa9.64□□□□□ -0.87
SCAMP1-205ENST00000614488 NPR3P17342 541 aa9.64□□□□□ -0.87
SCAMP1-205ENST00000614488 SF3B2Q13435 895 aaKnown RBP9.64□□□□□ -0.87
SCAMP1-205ENST00000614488 NEDD1Q8NHV4 660 aa9.64□□□□□ -0.87
SCAMP1-205ENST00000614488 PNMA5Q96PV4 448 aa9.64□□□□□ -0.87
SCAMP1-205ENST00000614488 EGFL7Q9UHF1 273 aa9.64□□□□□ -0.87
SCAMP1-205ENST00000614488 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.64□□□□□ -0.87
SCAMP1-205ENST00000614488 ELOA3CA0A087WX78 387 aaPredicted RBP9.63□□□□□ -0.87
SCAMP1-205ENST00000614488 ELOA3DA6NLF2 546 aaPredicted RBP9.63□□□□□ -0.87
SCAMP1-205ENST00000614488 ELOA3BQ3SY89 546 aa9.63□□□□□ -0.87
SCAMP1-205ENST00000614488 ELOA3Q8NG57 546 aa9.63□□□□□ -0.87
SCAMP1-205ENST00000614488 KCNMB2Q9Y691 235 aa9.63□□□□□ -0.87
SCAMP1-205ENST00000614488 ZBTB39O15060 712 aa9.62□□□□□ -0.87
SCAMP1-205ENST00000614488 MAP3K6O95382 1288 aa9.62□□□□□ -0.87
SCAMP1-205ENST00000614488 NFKB1P19838 968 aa9.62□□□□□ -0.87
SCAMP1-205ENST00000614488 MPSTP25325 297 aa9.62□□□□□ -0.87
SCAMP1-205ENST00000614488 TXNDC2Q86VQ3 553 aa9.62□□□□□ -0.87
SCAMP1-205ENST00000614488 CMTR1Q8N1G2 835 aaKnown RBP9.62□□□□□ -0.87
SCAMP1-205ENST00000614488 PIK3R5Q8WYR1 880 aa9.62□□□□□ -0.87
SCAMP1-205ENST00000614488 USP20Q9Y2K6 914 aa9.62□□□□□ -0.87
SCAMP1-205ENST00000614488 XYLBO75191 536 aa9.61□□□□□ -0.87
SCAMP1-205ENST00000614488 BRD1O95696 1058 aa9.61□□□□□ -0.87
SCAMP1-205ENST00000614488 MARSP56192 900 aaKnown RBP9.61□□□□□ -0.87
SCAMP1-205ENST00000614488 FKBP4Q02790 459 aaKnown RBP eCLIP9.61□□□□□ -0.87
SCAMP1-205ENST00000614488 NOM1Q5C9Z4 860 aaKnown RBP9.61□□□□□ -0.87
SCAMP1-205ENST00000614488 ALKBH2Q6NS38 261 aa9.61□□□□□ -0.87
SCAMP1-205ENST00000614488 FAM13AO94988 1023 aa9.6□□□□□ -0.87
SCAMP1-205ENST00000614488 ABL1P00519 1130 aa9.6□□□□□ -0.87
SCAMP1-205ENST00000614488 ADH7P40394 386 aa9.6□□□□□ -0.87
SCAMP1-205ENST00000614488 MTMR3Q13615 1198 aa9.6□□□□□ -0.87
SCAMP1-205ENST00000614488 CHSY3Q70JA7 882 aa9.6□□□□□ -0.87
SCAMP1-205ENST00000614488 BTBD6Q96KE9 485 aa9.6□□□□□ -0.87
SCAMP1-205ENST00000614488 RNF225M0QZC1 329 aaPredicted RBP9.59□□□□□ -0.87
SCAMP1-205ENST00000614488 ALAS2P22557 587 aa9.59□□□□□ -0.87
SCAMP1-205ENST00000614488 AMPD1P23109 780 aa9.59□□□□□ -0.87
SCAMP1-205ENST00000614488 EIF1AXP47813 144 aaKnown RBP9.59□□□□□ -0.87
SCAMP1-205ENST00000614488 ZNF211Q13398 564 aaPredicted RBP9.59□□□□□ -0.87
SCAMP1-205ENST00000614488 TRIP4Q15650 581 aaPredicted RBP9.59□□□□□ -0.87
SCAMP1-205ENST00000614488 KANK3Q6NY19 840 aa9.59□□□□□ -0.87
SCAMP1-205ENST00000614488 GPR152Q8TDT2 470 aa9.59□□□□□ -0.87
SCAMP1-205ENST00000614488 SCARF2Q96GP6 870 aaPredicted RBP9.59□□□□□ -0.87
SCAMP1-205ENST00000614488 FNDC3AQ9Y2H6 1198 aaKnown RBP9.59□□□□□ -0.87
SCAMP1-205ENST00000614488 ICMTO60725 284 aa9.58□□□□□ -0.88
SCAMP1-205ENST00000614488 RPLP1P05386 114 aaKnown RBP9.58□□□□□ -0.88
SCAMP1-205ENST00000614488 RARAP10276 462 aa9.58□□□□□ -0.88
SCAMP1-205ENST00000614488 SERPINB4P48594 390 aa9.58□□□□□ -0.88
SCAMP1-205ENST00000614488 CCER1Q8TC90 406 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms