RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.46□□□□□ -0.262e-7■■■□□ 18.1
ATF3-211ENST00000613954 ADAMTS2O95450 1211 aa13.45□□□□□ -0.26
ATF3-211ENST00000613954 HSPA4P34932 840 aa13.45□□□□□ -0.26
ATF3-211ENST00000613954 USP48Q86UV5 1035 aa13.45□□□□□ -0.26
ATF3-211ENST00000613954 ATP6V1DQ9Y5K8 247 aa13.45□□□□□ -0.26
ATF3-211ENST00000613954 PROSER3Q2NL68 480 aa13.44□□□□□ -0.26
ATF3-211ENST00000613954 PIBF1Q8WXW3 757 aa13.44□□□□□ -0.26
ATF3-211ENST00000613954 NRAPQ86VF7 1730 aa13.44□□□□□ -0.26
ATF3-211ENST00000613954 ADCY9O60503 1353 aa13.44□□□□□ -0.26
ATF3-211ENST00000613954 PAPPAQ13219 1627 aa13.44□□□□□ -0.26
ATF3-211ENST00000613954 PI4KAP2A4QPH2 592 aa13.44□□□□□ -0.26
ATF3-211ENST00000613954 PI4KAP1Q8N8J0 262 aa13.44□□□□□ -0.26
ATF3-211ENST00000613954 MYRIPQ8NFW9 859 aa13.44□□□□□ -0.26
ATF3-211ENST00000613954 NUTM2BA6NNL0 878 aaPredicted RBP13.43□□□□□ -0.26
ATF3-211ENST00000613954 NUTM2EB1AL46 878 aaPredicted RBP13.43□□□□□ -0.26
ATF3-211ENST00000613954 RAB11FIP3O75154 756 aa13.43□□□□□ -0.26
ATF3-211ENST00000613954 PDIA6Q15084 440 aa13.43□□□□□ -0.26
ATF3-211ENST00000613954 NUTM2AQ8IVF1 878 aaPredicted RBP13.43□□□□□ -0.26
ATF3-211ENST00000613954 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.43□□□□□ -0.26
ATF3-211ENST00000613954 WNK3Q9BYP7 1800 aa13.43□□□□□ -0.26
ATF3-211ENST00000613954 GLI3P10071 1580 aa13.43□□□□□ -0.26
ATF3-211ENST00000613954 DDX58O95786 925 aaKnown RBP13.42□□□□□ -0.26
ATF3-211ENST00000613954 UBE2HP62256 183 aa13.42□□□□□ -0.26
ATF3-211ENST00000613954 DNTTIP2Q5QJE6 756 aaKnown RBP13.42□□□□□ -0.26
ATF3-211ENST00000613954 BEND3Q5T5X7 828 aa13.42□□□□□ -0.26
ATF3-211ENST00000613954 KSR2Q6VAB6 950 aa13.42□□□□□ -0.26
ATF3-211ENST00000613954 RPAP1Q9BWH6 1393 aaPredicted RBP13.42□□□□□ -0.26
ATF3-211ENST00000613954 LAMB4A4D0S4 1761 aa13.42□□□□□ -0.26
ATF3-211ENST00000613954 UBR2Q8IWV8 1755 aa13.42□□□□□ -0.26
ATF3-211ENST00000613954 GADD45BO75293 160 aaPredicted RBP13.42□□□□□ -0.26
ATF3-211ENST00000613954 TSHZ3Q63HK5 1081 aa13.42□□□□□ -0.26
ATF3-211ENST00000613954 NOL8Q76FK4 1167 aaKnown RBP13.42□□□□□ -0.26
ATF3-211ENST00000613954 SMAP1Q8IYB5 467 aaPredicted RBP13.42□□□□□ -0.26
ATF3-211ENST00000613954 CDCA7Q9BWT1 371 aaPredicted RBP13.42□□□□□ -0.26
ATF3-211ENST00000613954 UPF3BQ9BZI7 483 aaKnown RBP13.42□□□□□ -0.26
ATF3-211ENST00000613954 USP44Q9H0E7 712 aa13.42□□□□□ -0.26
ATF3-211ENST00000613954 TOGARAM1Q9Y4F4 1720 aa13.42□□□□□ -0.26
ATF3-211ENST00000613954 NWD2Q9ULI1 1742 aa13.41□□□□□ -0.26
ATF3-211ENST00000613954 PNMA6EA0A0J9YXQ4 647 aa13.41□□□□□ -0.26
ATF3-211ENST00000613954 TPM3P06753 285 aa13.41□□□□□ -0.26
ATF3-211ENST00000613954 ZSCAN22P10073 491 aaPredicted RBP13.41□□□□□ -0.26
ATF3-211ENST00000613954 TMOD3Q9NYL9 352 aa13.41□□□□□ -0.26
ATF3-211ENST00000613954 MAP3K2Q9Y2U5 619 aa13.41□□□□□ -0.26
ATF3-211ENST00000613954 THRAP3Q9Y2W1 955 aaKnown RBP13.41□□□□□ -0.26
ATF3-211ENST00000613954 RAD50Q92878 1312 aa13.41□□□□□ -0.26
ATF3-211ENST00000613954 TNS2Q63HR2 1409 aa13.41□□□□□ -0.26
ATF3-211ENST00000613954 KCPQ6ZWJ8 1503 aa13.41□□□□□ -0.26
ATF3-211ENST00000613954 EXOC5O00471 708 aa13.4□□□□□ -0.26
ATF3-211ENST00000613954 ALDH1L1O75891 902 aa13.4□□□□□ -0.26
ATF3-211ENST00000613954 UBTFL1P0CB47 393 aaPredicted RBP13.4□□□□□ -0.26
ATF3-211ENST00000613954 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.26
ATF3-211ENST00000613954 NOLC1Q14978 699 aaKnown RBP eCLIP13.4□□□□□ -0.26
ATF3-211ENST00000613954 USP16Q9Y5T5 823 aa13.4□□□□□ -0.26
ATF3-211ENST00000613954 SLIT2O94813 1529 aa13.4□□□□□ -0.26
ATF3-211ENST00000613954 SPATA31A1Q5TZJ5 1347 aa13.4□□□□□ -0.26
ATF3-211ENST00000613954 JCADQ9P266 1359 aa13.4□□□□□ -0.26
ATF3-211ENST00000613954 LRP6O75581 1613 aa13.4□□□□□ -0.26
ATF3-211ENST00000613954 STX6O43752 255 aa13.39□□□□□ -0.27
ATF3-211ENST00000613954 ADCY5O95622 1261 aa13.39□□□□□ -0.27
ATF3-211ENST00000613954 PDIA4P13667 645 aaKnown RBP13.39□□□□□ -0.27
ATF3-211ENST00000613954 SSH3Q8TE77 659 aa13.39□□□□□ -0.27
ATF3-211ENST00000613954 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
ATF3-211ENST00000613954 GDPD2Q9HCC8 539 aa13.39□□□□□ -0.27
ATF3-211ENST00000613954 TCHHQ07283 1943 aa13.39□□□□□ -0.27
ATF3-211ENST00000613954 SGSM2O43147 1006 aa13.39□□□□□ -0.27
ATF3-211ENST00000613954 MYL6BP14649 208 aa13.39□□□□□ -0.27
ATF3-211ENST00000613954 CNTROBQ8N137 903 aa13.39□□□□□ -0.27
ATF3-211ENST00000613954 TTC14Q96N46 770 aa13.39□□□□□ -0.27
ATF3-211ENST00000613954 SPTLC3Q9NUV7 552 aa13.39□□□□□ -0.27
ATF3-211ENST00000613954 USP25Q9UHP3 1055 aa13.39□□□□□ -0.27
ATF3-211ENST00000613954 LIMCH1Q9UPQ0 1083 aa13.39□□□□□ -0.27
ATF3-211ENST00000613954 LRRFIP2Q9Y608 721 aaKnown RBP13.39□□□□□ -0.27
ATF3-211ENST00000613954 KDM4AO75164 1064 aa13.38□□□□□ -0.27
ATF3-211ENST00000613954 F13A1P00488 732 aa13.38□□□□□ -0.27
ATF3-211ENST00000613954 AIMP1Q12904 312 aaKnown RBP13.38□□□□□ -0.27
ATF3-211ENST00000613954 LRP10Q7Z4F1 713 aa13.38□□□□□ -0.27
ATF3-211ENST00000613954 UNC5CLQ8IV45 518 aa13.38□□□□□ -0.27
ATF3-211ENST00000613954 XAGE3Q8WTP9 111 aa13.38□□□□□ -0.27
ATF3-211ENST00000613954 SPATA31A5Q5VU36 1347 aa13.38□□□□□ -0.27
ATF3-211ENST00000613954 SPATA31A7Q8IWB4 1347 aa13.38□□□□□ -0.27
ATF3-211ENST00000613954 LINS1Q8NG48 757 aa13.37□□□□□ -0.27
ATF3-211ENST00000613954 SMC3Q9UQE7 1217 aa13.37□□□□□ -0.27
ATF3-211ENST00000613954 CNPY2Q9Y2B0 182 aa13.37□□□□□ -0.27
ATF3-211ENST00000613954 SNX14Q9Y5W7 946 aa13.37□□□□□ -0.27
ATF3-211ENST00000613954 FOXD4L6Q3SYB3 417 aaPredicted RBP13.37□□□□□ -0.27
ATF3-211ENST00000613954 FOXD4L3Q6VB84 417 aaPredicted RBP13.37□□□□□ -0.27
ATF3-211ENST00000613954 COPS6Q7L5N1 327 aa13.37□□□□□ -0.27
ATF3-211ENST00000613954 RIC3Q7Z5B4 369 aa13.37□□□□□ -0.27
ATF3-211ENST00000613954 CERKQ8TCT0 537 aa13.37□□□□□ -0.27
ATF3-211ENST00000613954 GOLGA6L6A8MZA4 724 aa13.36□□□□□ -0.27
ATF3-211ENST00000613954 PTCD1O75127 700 aaKnown RBP13.36□□□□□ -0.27
ATF3-211ENST00000613954 HCLS1P14317 486 aaPredicted RBP13.36□□□□□ -0.27
ATF3-211ENST00000613954 SYT1P21579 422 aa13.36□□□□□ -0.27
ATF3-211ENST00000613954 HSP90AB4PQ58FF6 505 aa13.36□□□□□ -0.27
ATF3-211ENST00000613954 PIGBQ92521 554 aa13.36□□□□□ -0.27
ATF3-211ENST00000613954 KIF1BPQ96EK5 621 aa13.36□□□□□ -0.27
ATF3-211ENST00000613954 ZSCAN31Q96LW9 406 aaPredicted RBP13.36□□□□□ -0.27
ATF3-211ENST00000613954 HDAC5Q9UQL6 1122 aa13.36□□□□□ -0.27
ATF3-211ENST00000613954 ITGB4P16144 1822 aa13.35□□□□□ -0.27
ATF3-211ENST00000613954 NBPF7P0C2Y1 421 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms