RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 KIF13BQ9NQT8 1826 aa16.33■□□□□ 0.21
CCL4-201ENST00000613947 A0A0G2JLW4 131 aa16.33■□□□□ 0.21
CCL4-201ENST00000613947 NTSR2O95665 410 aa16.33■□□□□ 0.21
CCL4-201ENST00000613947 TGFB2P61812 414 aa16.33■□□□□ 0.21
CCL4-201ENST00000613947 ST5P78524 1137 aa16.33■□□□□ 0.21
CCL4-201ENST00000613947 DNAAF4Q8WXU2 420 aa16.33■□□□□ 0.21
CCL4-201ENST00000613947 UTP14AQ9BVJ6 771 aaKnown RBP16.33■□□□□ 0.21
CCL4-201ENST00000613947 ERFEQ4G0M1 354 aa16.33■□□□□ 0.2
CCL4-201ENST00000613947 BRIP1Q9BX63 1249 aa16.33■□□□□ 0.2
CCL4-201ENST00000613947 ANKRD36CQ5JPF3 1778 aa16.33■□□□□ 0.2
CCL4-201ENST00000613947 IGKV5-2P06315 115 aa16.32■□□□□ 0.2
CCL4-201ENST00000613947 DPEP1P16444 411 aa16.32■□□□□ 0.2
CCL4-201ENST00000613947 TRMT112Q9UI30 125 aaKnown RBP16.32■□□□□ 0.2
CCL4-201ENST00000613947 CHRNA5P30532 468 aa16.31■□□□□ 0.2
CCL4-201ENST00000613947 NEXNQ0ZGT2 675 aa16.31■□□□□ 0.2
CCL4-201ENST00000613947 SYNE4Q8N205 404 aa16.31■□□□□ 0.2
CCL4-201ENST00000613947 IBTKQ9P2D0 1353 aaPredicted RBP16.31■□□□□ 0.2
CCL4-201ENST00000613947 BCAR3O75815 825 aa16.31■□□□□ 0.2
CCL4-201ENST00000613947 BRPF1P55201 1214 aaPredicted RBP16.31■□□□□ 0.2
CCL4-201ENST00000613947 CWF19L2Q2TBE0 894 aaKnown RBP16.31■□□□□ 0.2
CCL4-201ENST00000613947 CCDC191Q8NCU4 936 aa16.31■□□□□ 0.2
CCL4-201ENST00000613947 WWC3Q9ULE0 1092 aa16.31■□□□□ 0.2
CCL4-201ENST00000613947 NOB1Q9ULX3 412 aaKnown RBP16.31■□□□□ 0.2
CCL4-201ENST00000613947 PTPRCP08575 1304 aa16.31■□□□□ 0.2
CCL4-201ENST00000613947 ABCC12Q96J65 1359 aa16.31■□□□□ 0.2
CCL4-201ENST00000613947 PXDNLA1KZ92 1463 aa16.31■□□□□ 0.2
CCL4-201ENST00000613947 KCNA3P22001 575 aa16.3■□□□□ 0.2
CCL4-201ENST00000613947 PDE6BP35913 854 aa16.3■□□□□ 0.2
CCL4-201ENST00000613947 FAM89AQ96GI7 184 aa16.3■□□□□ 0.2
CCL4-201ENST00000613947 CWC25Q9NXE8 425 aaPredicted RBP16.3■□□□□ 0.2
CCL4-201ENST00000613947 ANKRD31Q8N7Z5 1873 aa16.29■□□□□ 0.2
CCL4-201ENST00000613947 NEURL1BA8MQ27 555 aa16.29■□□□□ 0.2
CCL4-201ENST00000613947 RTL5Q5HYW3 569 aaPredicted RBP16.29■□□□□ 0.2
CCL4-201ENST00000613947 C2CD5Q86YS7 1000 aa16.29■□□□□ 0.2
CCL4-201ENST00000613947 N4BP2Q86UW6 1770 aaPredicted RBP16.29■□□□□ 0.2
CCL4-201ENST00000613947 SH3TC1Q8TE82 1336 aa16.28■□□□□ 0.2
CCL4-201ENST00000613947 H0YIN7 160 aa16.28■□□□□ 0.2
CCL4-201ENST00000613947 SLC10A5Q5PT55 438 aa16.28■□□□□ 0.2
CCL4-201ENST00000613947 BEND3Q5T5X7 828 aa16.28■□□□□ 0.2
CCL4-201ENST00000613947 SLC4A10Q6U841 1118 aa16.28■□□□□ 0.2
CCL4-201ENST00000613947 LINS1Q8NG48 757 aa16.28■□□□□ 0.2
CCL4-201ENST00000613947 KIAA1551Q9HCM1 1747 aa16.28■□□□□ 0.2
CCL4-201ENST00000613947 RNF123Q5XPI4 1314 aa16.28■□□□□ 0.2
CCL4-201ENST00000613947 KLRG2A4D1S0 409 aaPredicted RBP16.28■□□□□ 0.2
CCL4-201ENST00000613947 HCLS1P14317 486 aaPredicted RBP16.28■□□□□ 0.2
CCL4-201ENST00000613947 ZBTB38Q8NAP3 1195 aaPredicted RBP16.28■□□□□ 0.2
CCL4-201ENST00000613947 JARID2Q92833 1246 aaPredicted RBP16.28■□□□□ 0.2
CCL4-201ENST00000613947 SRGNP10124 158 aa16.26■□□□□ 0.19
CCL4-201ENST00000613947 GCKRQ14397 625 aa16.26■□□□□ 0.19
CCL4-201ENST00000613947 C3orf67Q6ZVT6 689 aa16.26■□□□□ 0.19
CCL4-201ENST00000613947 PIM2Q9P1W9 311 aa16.26■□□□□ 0.19
CCL4-201ENST00000613947 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
CCL4-201ENST00000613947 PCCAP05165 728 aaPredicted RBP16.26■□□□□ 0.19
CCL4-201ENST00000613947 ZNF622Q969S3 477 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCL4-201ENST00000613947 PDZRN3Q9UPQ7 1066 aa16.26■□□□□ 0.19
CCL4-201ENST00000613947 IRS4O14654 1257 aaPredicted RBP16.25■□□□□ 0.19
CCL4-201ENST00000613947 CRY2Q49AN0 593 aa16.25■□□□□ 0.19
CCL4-201ENST00000613947 FRAT1Q92837 279 aaPredicted RBP16.25■□□□□ 0.19
CCL4-201ENST00000613947 NLRP3Q96P20 1036 aa16.25■□□□□ 0.19
CCL4-201ENST00000613947 SRCIN1Q9C0H9 1055 aa16.25■□□□□ 0.19
CCL4-201ENST00000613947 YBX3P16989 372 aaKnown RBP eCLIP16.24■□□□□ 0.19
CCL4-201ENST00000613947 GPR162Q16538 588 aa16.24■□□□□ 0.19
CCL4-201ENST00000613947 ARHGAP45Q92619 1136 aa16.24■□□□□ 0.19
CCL4-201ENST00000613947 TNRC6CQ9HCJ0 1690 aaKnown RBP16.24■□□□□ 0.19
CCL4-201ENST00000613947 RIC1Q4ADV7 1423 aa16.23■□□□□ 0.19
CCL4-201ENST00000613947 H7C1W4 665 aa16.23■□□□□ 0.19
CCL4-201ENST00000613947 MASTLQ96GX5 879 aa16.23■□□□□ 0.19
CCL4-201ENST00000613947 API5Q9BZZ5 524 aaKnown RBP16.23■□□□□ 0.19
CCL4-201ENST00000613947 BCS1LQ9Y276 419 aa16.23■□□□□ 0.19
CCL4-201ENST00000613947 COL11A2P13942 1736 aaPredicted RBP16.23■□□□□ 0.19
CCL4-201ENST00000613947 IPO8O15397 1037 aaKnown RBP16.23■□□□□ 0.19
CCL4-201ENST00000613947 NPR1P16066 1061 aa16.23■□□□□ 0.19
CCL4-201ENST00000613947 DALRD3Q5D0E6 543 aaKnown RBP16.23■□□□□ 0.19
CCL4-201ENST00000613947 UBE3BQ7Z3V4 1068 aa16.23■□□□□ 0.19
CCL4-201ENST00000613947 TTLL6Q8N841 843 aa16.23■□□□□ 0.19
CCL4-201ENST00000613947 RCAN3Q9UKA8 241 aa16.23■□□□□ 0.19
CCL4-201ENST00000613947 BRCA1P38398 1863 aaKnown RBP16.22■□□□□ 0.19
CCL4-201ENST00000613947 ALDH1L1O75891 902 aa16.22■□□□□ 0.19
CCL4-201ENST00000613947 TRIM27P14373 513 aa16.22■□□□□ 0.19
CCL4-201ENST00000613947 STYK1Q6J9G0 422 aa16.22■□□□□ 0.19
CCL4-201ENST00000613947 ATF7IPQ6VMQ6 1270 aa16.22■□□□□ 0.19
CCL4-201ENST00000613947 TNNQ9UQP3 1299 aa16.21■□□□□ 0.19
CCL4-201ENST00000613947 CDHR2Q9BYE9 1310 aa16.21■□□□□ 0.19
CCL4-201ENST00000613947 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.18
CCL4-201ENST00000613947 HOXA10P31260 410 aaPredicted RBP16.21■□□□□ 0.18
CCL4-201ENST00000613947 DEKP35659 375 aaKnown RBP16.21■□□□□ 0.18
CCL4-201ENST00000613947 CASP7P55210 303 aa16.21■□□□□ 0.18
CCL4-201ENST00000613947 ZKSCAN2Q63HK3 967 aa16.21■□□□□ 0.18
CCL4-201ENST00000613947 RPGRQ92834 1020 aaKnown RBP16.21■□□□□ 0.18
CCL4-201ENST00000613947 CNKSR1Q969H4 720 aa16.21■□□□□ 0.18
CCL4-201ENST00000613947 DLEC1Q9Y238 1755 aa16.2■□□□□ 0.18
CCL4-201ENST00000613947 DDX60Q8IY21 1712 aaKnown RBP16.2■□□□□ 0.18
CCL4-201ENST00000613947 GRM8O00222 908 aa16.2■□□□□ 0.18
CCL4-201ENST00000613947 HSP90B1P14625 803 aaKnown RBP16.2■□□□□ 0.18
CCL4-201ENST00000613947 CLUAP1Q96AJ1 413 aa16.2■□□□□ 0.18
CCL4-201ENST00000613947 C9orf78Q9NZ63 289 aaPredicted RBP16.2■□□□□ 0.18
CCL4-201ENST00000613947 PDE8AO60658 829 aa16.19■□□□□ 0.18
CCL4-201ENST00000613947 CCT4P50991 539 aaKnown RBP16.19■□□□□ 0.18
CCL4-201ENST00000613947 SF3B3Q15393 1217 aaKnown RBP16.19■□□□□ 0.18
CCL4-201ENST00000613947 RBM17Q96I25 401 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms