RNA–Protein interactions for RNA: ENST00000613513.1

GTF2I-213, Transcript of general transcription factor IIi, humanhuman

TSL 4

Gene GTF2I, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-213ENST00000613513 NLRP3Q96P20 1036 aa25.48■■□□□ 1.67
GTF2I-213ENST00000613513 HYPKQ9NX55 129 aa25.48■■□□□ 1.67
GTF2I-213ENST00000613513 ZNF853P0CG23 659 aa25.47■■□□□ 1.67
GTF2I-213ENST00000613513 FKBP4Q02790 459 aaKnown RBP eCLIP25.47■■□□□ 1.67
GTF2I-213ENST00000613513 RBM17Q96I25 401 aaKnown RBP25.47■■□□□ 1.67
GTF2I-213ENST00000613513 NUP98P52948 1817 aa25.47■■□□□ 1.67
GTF2I-213ENST00000613513 COL11A2P13942 1736 aaPredicted RBP25.46■■□□□ 1.67
GTF2I-213ENST00000613513 NTSR2O95665 410 aa25.46■■□□□ 1.67
GTF2I-213ENST00000613513 TCIRG1Q13488 830 aa25.46■■□□□ 1.67
GTF2I-213ENST00000613513 NECTIN2Q92692 538 aa25.46■■□□□ 1.67
GTF2I-213ENST00000613513 CRAMP1Q96RY5 1269 aa25.46■■□□□ 1.67
GTF2I-213ENST00000613513 TMX4Q9H1E5 349 aaPredicted RBP25.46■■□□□ 1.67
GTF2I-213ENST00000613513 SLX4Q8IY92 1834 aa25.46■■□□□ 1.67
GTF2I-213ENST00000613513 AIMP1Q12904 312 aaKnown RBP25.45■■□□□ 1.66
GTF2I-213ENST00000613513 NCBP3Q53F19 620 aaKnown RBP25.45■■□□□ 1.66
GTF2I-213ENST00000613513 DUSP27Q5VZP5 1158 aa25.45■■□□□ 1.66
GTF2I-213ENST00000613513 MBIPQ9NS73 344 aa25.45■■□□□ 1.66
GTF2I-213ENST00000613513 ANXA1P04083 346 aa25.44■■□□□ 1.66
GTF2I-213ENST00000613513 ANKRD13DQ6ZTN6 518 aa25.44■■□□□ 1.66
GTF2I-213ENST00000613513 SMC1BQ8NDV3 1235 aa25.44■■□□□ 1.66
GTF2I-213ENST00000613513 CHPF2Q9P2E5 772 aa25.44■■□□□ 1.66
GTF2I-213ENST00000613513 FER1L6Q2WGJ9 1857 aa25.44■■□□□ 1.66
GTF2I-213ENST00000613513 KRT24Q2M2I5 525 aa25.43■■□□□ 1.66
GTF2I-213ENST00000613513 PLBD2Q8NHP8 589 aa25.43■■□□□ 1.66
GTF2I-213ENST00000613513 ABCC12Q96J65 1359 aa25.43■■□□□ 1.66
GTF2I-213ENST00000613513 PSMD1Q99460 953 aa25.42■■□□□ 1.66
GTF2I-213ENST00000613513 ARFGEF2Q9Y6D5 1785 aa25.41■■□□□ 1.66
GTF2I-213ENST00000613513 CCDC27Q2M243 656 aa25.41■■□□□ 1.66
GTF2I-213ENST00000613513 NLRP10Q86W26 655 aa25.41■■□□□ 1.66
GTF2I-213ENST00000613513 TNRC6CQ9HCJ0 1690 aaKnown RBP25.4■■□□□ 1.66
GTF2I-213ENST00000613513 TRMT112Q9UI30 125 aaKnown RBP25.4■■□□□ 1.66
GTF2I-213ENST00000613513 MIER1Q8N108 512 aa25.39■■□□□ 1.66
GTF2I-213ENST00000613513 SH3TC1Q8TE82 1336 aa25.38■■□□□ 1.65
GTF2I-213ENST00000613513 IQCA1LA6NCM1 817 aa25.38■■□□□ 1.65
GTF2I-213ENST00000613513 BBOX1O75936 387 aa25.38■■□□□ 1.65
GTF2I-213ENST00000613513 SYNE4Q8N205 404 aa25.38■■□□□ 1.65
GTF2I-213ENST00000613513 IARSP41252 1262 aaKnown RBP25.37■■□□□ 1.65
GTF2I-213ENST00000613513 TRIM28Q13263 835 aaKnown RBP25.37■■□□□ 1.65
GTF2I-213ENST00000613513 JDP2Q8WYK2 163 aa25.37■■□□□ 1.65
GTF2I-213ENST00000613513 CCDC88AQ3V6T2 1871 aa25.36■■□□□ 1.65
GTF2I-213ENST00000613513 DICER1Q9UPY3 1922 aaKnown RBP25.36■■□□□ 1.65
GTF2I-213ENST00000613513 HSP90B1P14625 803 aaKnown RBP25.36■■□□□ 1.65
GTF2I-213ENST00000613513 VPS33BQ9H267 617 aa25.36■■□□□ 1.65
GTF2I-213ENST00000613513 MRS2Q9HD23 443 aa25.36■■□□□ 1.65
GTF2I-213ENST00000613513 ZNF277Q9NRM2 450 aaPredicted RBP25.36■■□□□ 1.65
GTF2I-213ENST00000613513 PPEF1O14829 653 aaPredicted RBP25.35■■□□□ 1.65
GTF2I-213ENST00000613513 GOLGA2Q08379 1002 aa25.35■■□□□ 1.65
GTF2I-213ENST00000613513 CCDC30Q5VVM6 783 aa25.35■■□□□ 1.65
GTF2I-213ENST00000613513 L3MBTL3Q96JM7 780 aaPredicted RBP25.34■■□□□ 1.65
GTF2I-213ENST00000613513 ISCA1Q9BUE6 129 aa25.34■■□□□ 1.65
GTF2I-213ENST00000613513 POTECB2RU33 542 aa25.33■■□□□ 1.65
GTF2I-213ENST00000613513 DDNO94850 711 aaPredicted RBP25.33■■□□□ 1.65
GTF2I-213ENST00000613513 OLFM4Q6UX06 510 aa25.33■■□□□ 1.65
GTF2I-213ENST00000613513 DDX46Q7L014 1031 aaKnown RBP25.33■■□□□ 1.65
GTF2I-213ENST00000613513 TMC4Q7Z404 712 aa25.33■■□□□ 1.65
GTF2I-213ENST00000613513 ATP6V0A2Q9Y487 856 aa25.33■■□□□ 1.65
GTF2I-213ENST00000613513 IL16Q14005 1332 aa25.33■■□□□ 1.64
GTF2I-213ENST00000613513 TIAM2Q8IVF5 1701 aa25.32■■□□□ 1.64
GTF2I-213ENST00000613513 FZD9O00144 591 aa25.32■■□□□ 1.64
GTF2I-213ENST00000613513 DDX58O95786 925 aaKnown RBP25.32■■□□□ 1.64
GTF2I-213ENST00000613513 CCDC184Q52MB2 194 aa25.32■■□□□ 1.64
GTF2I-213ENST00000613513 RIC3Q7Z5B4 369 aa25.32■■□□□ 1.64
GTF2I-213ENST00000613513 SUPT20HQ8NEM7 779 aa25.32■■□□□ 1.64
GTF2I-213ENST00000613513 WDR90Q96KV7 1748 aa25.32■■□□□ 1.64
GTF2I-213ENST00000613513 ELL2O00472 640 aaPredicted RBP25.31■■□□□ 1.64
GTF2I-213ENST00000613513 C3orf67Q6ZVT6 689 aa25.31■■□□□ 1.64
GTF2I-213ENST00000613513 WWC1Q8IX03 1113 aa25.31■■□□□ 1.64
GTF2I-213ENST00000613513 HCLS1P14317 486 aaPredicted RBP25.3■■□□□ 1.64
GTF2I-213ENST00000613513 SP8Q8IXZ3 490 aa25.3■■□□□ 1.64
GTF2I-213ENST00000613513 C8orf58Q8NAV2 365 aa25.3■■□□□ 1.64
GTF2I-213ENST00000613513 CCER2I3L3R5 266 aa25.29■■□□□ 1.64
GTF2I-213ENST00000613513 EIF6P56537 245 aaKnown RBP25.29■■□□□ 1.64
GTF2I-213ENST00000613513 GPC2Q8N158 579 aa25.29■■□□□ 1.64
GTF2I-213ENST00000613513 CACNA1SQ13698 1873 aa25.29■■□□□ 1.64
GTF2I-213ENST00000613513 LARGE2Q8N3Y3 721 aa25.28■■□□□ 1.64
GTF2I-213ENST00000613513 DNAJC5GQ8N7S2 189 aa25.28■■□□□ 1.64
GTF2I-213ENST00000613513 ABCC4O15439 1325 aa25.28■■□□□ 1.64
GTF2I-213ENST00000613513 SNED1Q8TER0 1413 aa25.28■■□□□ 1.64
GTF2I-213ENST00000613513 GRAPQ13588 217 aa25.27■■□□□ 1.64
GTF2I-213ENST00000613513 SF3B3Q15393 1217 aaKnown RBP25.27■■□□□ 1.64
GTF2I-213ENST00000613513 CHADLQ6NUI6 762 aa25.27■■□□□ 1.64
GTF2I-213ENST00000613513 GRAPLQ8TC17 118 aaPredicted RBP25.27■■□□□ 1.64
GTF2I-213ENST00000613513 STK31Q9BXU1 1019 aa25.27■■□□□ 1.64
GTF2I-213ENST00000613513 ATP5J2-PTCD1G3V325 749 aa25.26■■□□□ 1.63
GTF2I-213ENST00000613513 PNMA8AQ86V59 439 aaPredicted RBP25.26■■□□□ 1.63
GTF2I-213ENST00000613513 CCDC191Q8NCU4 936 aa25.26■■□□□ 1.63
GTF2I-213ENST00000613513 HACL1Q9UJ83 578 aa25.26■■□□□ 1.63
GTF2I-213ENST00000613513 TCERG1O14776 1098 aaKnown RBP25.25■■□□□ 1.63
GTF2I-213ENST00000613513 WDR63Q8IWG1 891 aa25.25■■□□□ 1.63
GTF2I-213ENST00000613513 ZBTB38Q8NAP3 1195 aaPredicted RBP25.25■■□□□ 1.63
GTF2I-213ENST00000613513 FAM89AQ96GI7 184 aa25.25■■□□□ 1.63
GTF2I-213ENST00000613513 RTFDC1Q9BY42 306 aaPredicted RBP25.25■■□□□ 1.63
GTF2I-213ENST00000613513 ANKRD36CQ5JPF3 1778 aa25.24■■□□□ 1.63
GTF2I-213ENST00000613513 DPP8Q6V1X1 898 aaPredicted RBP25.24■■□□□ 1.63
GTF2I-213ENST00000613513 LDHDQ86WU2 507 aa25.24■■□□□ 1.63
GTF2I-213ENST00000613513 MPNDQ8N594 471 aa25.24■■□□□ 1.63
GTF2I-213ENST00000613513 TAF1DQ9H5J8 278 aaPredicted RBP25.24■■□□□ 1.63
GTF2I-213ENST00000613513 PHAXQ9H814 394 aaKnown RBP25.24■■□□□ 1.63
GTF2I-213ENST00000613513 NIM1KQ8IY84 436 aa25.23■■□□□ 1.63
GTF2I-213ENST00000613513 ZNF541Q9H0D2 1346 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms