RNA–Protein interactions for RNA: ENST00000612779.1

HOXA2-202, Transcript of homeobox A2, humanhuman

Gene HOXA2, Length 1,993 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2-202ENST00000612779 RAB11FIP3O75154 756 aa23.54■■□□□ 1.36
HOXA2-202ENST00000612779 OTUD7AQ8TE49 926 aaPredicted RBP23.54■■□□□ 1.36
HOXA2-202ENST00000612779 ARXQ96QS3 562 aa23.54■■□□□ 1.36
HOXA2-202ENST00000612779 ZBTB47Q9UFB7 747 aaPredicted RBP23.54■■□□□ 1.36
HOXA2-202ENST00000612779 HSP90AB3PQ58FF7 597 aa23.53■■□□□ 1.36
HOXA2-202ENST00000612779 FAM196AQ6ZSG2 479 aa23.53■■□□□ 1.36
HOXA2-202ENST00000612779 SALL3Q9BXA9 1300 aa23.52■■□□□ 1.36
HOXA2-202ENST00000612779 FOXO4P98177 505 aa23.52■■□□□ 1.36
HOXA2-202ENST00000612779 NPM2Q86SE8 214 aaKnown RBP23.51■■□□□ 1.35
HOXA2-202ENST00000612779 CAMTA2O94983 1202 aa23.51■■□□□ 1.35
HOXA2-202ENST00000612779 HSP90AB4PQ58FF6 505 aa23.51■■□□□ 1.35
HOXA2-202ENST00000612779 BMP2KLQ5H9B9 411 aa23.51■■□□□ 1.35
HOXA2-202ENST00000612779 RC3H1Q5TC82 1133 aaKnown RBP23.51■■□□□ 1.35
HOXA2-202ENST00000612779 NLRP10Q86W26 655 aa23.51■■□□□ 1.35
HOXA2-202ENST00000612779 PCCAP05165 728 aaPredicted RBP23.5■■□□□ 1.35
HOXA2-202ENST00000612779 RFX5P48382 616 aaPredicted RBP23.5■■□□□ 1.35
HOXA2-202ENST00000612779 ZNF34Q8IZ26 560 aa23.5■■□□□ 1.35
HOXA2-202ENST00000612779 RHPN1Q8TCX5 695 aa23.5■■□□□ 1.35
HOXA2-202ENST00000612779 CCNL1Q9UK58 526 aaPredicted RBP23.5■■□□□ 1.35
HOXA2-202ENST00000612779 PA2G4Q9UQ80 394 aaKnown RBP23.5■■□□□ 1.35
HOXA2-202ENST00000612779 KIF1BPQ96EK5 621 aa23.49■■□□□ 1.35
HOXA2-202ENST00000612779 TUBGCP6Q96RT7 1819 aa23.48■■□□□ 1.35
HOXA2-202ENST00000612779 GPTP24298 496 aa23.48■■□□□ 1.35
HOXA2-202ENST00000612779 RTL5Q5HYW3 569 aaPredicted RBP23.48■■□□□ 1.35
HOXA2-202ENST00000612779 ZBTB38Q8NAP3 1195 aaPredicted RBP23.48■■□□□ 1.35
HOXA2-202ENST00000612779 OSBPL3Q9H4L5 887 aa23.48■■□□□ 1.35
HOXA2-202ENST00000612779 C4BP0C0L5 1744 aa23.48■■□□□ 1.35
HOXA2-202ENST00000612779 SCN7AQ01118 1682 aa23.47■■□□□ 1.35
HOXA2-202ENST00000612779 UBN2Q6ZU65 1347 aa23.47■■□□□ 1.35
HOXA2-202ENST00000612779 LMBR1LQ6UX01 489 aa23.47■■□□□ 1.35
HOXA2-202ENST00000612779 COPRSQ9NQ92 184 aa23.47■■□□□ 1.35
HOXA2-202ENST00000612779 GSPT1P15170 499 aaKnown RBP23.46■■□□□ 1.35
HOXA2-202ENST00000612779 TTC22Q5TAA0 569 aa23.46■■□□□ 1.35
HOXA2-202ENST00000612779 PLA2G12BQ9BX93 195 aa23.46■■□□□ 1.35
HOXA2-202ENST00000612779 IL1RAPL2Q9NP60 686 aa23.46■■□□□ 1.35
HOXA2-202ENST00000612779 CDHR2Q9BYE9 1310 aa23.46■■□□□ 1.35
HOXA2-202ENST00000612779 MYH3P11055 1940 aa23.45■■□□□ 1.34
HOXA2-202ENST00000612779 EP400Q96L91 3159 aa23.45■■□□□ 1.34
HOXA2-202ENST00000612779 RPS6KA4O75676 772 aa23.45■■□□□ 1.34
HOXA2-202ENST00000612779 PDE1AP54750 535 aa23.45■■□□□ 1.34
HOXA2-202ENST00000612779 PTPN12Q05209 780 aaKnown RBP23.45■■□□□ 1.34
HOXA2-202ENST00000612779 KLHDC4Q8TBB5 520 aa23.45■■□□□ 1.34
HOXA2-202ENST00000612779 FAM89AQ96GI7 184 aa23.45■■□□□ 1.34
HOXA2-202ENST00000612779 SASH1O94885 1247 aa23.43■■□□□ 1.34
HOXA2-202ENST00000612779 ERC1Q8IUD2 1116 aa23.43■■□□□ 1.34
HOXA2-202ENST00000612779 STAP2Q9UGK3 403 aa23.43■■□□□ 1.34
HOXA2-202ENST00000612779 TRIM37O94972 964 aa23.43■■□□□ 1.34
HOXA2-202ENST00000612779 SEC24BO95487 1268 aa23.43■■□□□ 1.34
HOXA2-202ENST00000612779 SYNE4Q8N205 404 aa23.43■■□□□ 1.34
HOXA2-202ENST00000612779 LRRC4BQ9NT99 713 aa23.43■■□□□ 1.34
HOXA2-202ENST00000612779 OS9Q13438 667 aaPredicted RBP23.42■■□□□ 1.34
HOXA2-202ENST00000612779 RGL2O15211 777 aa23.41■■□□□ 1.34
HOXA2-202ENST00000612779 MX1P20591 662 aa23.41■■□□□ 1.34
HOXA2-202ENST00000612779 G3BP1Q13283 466 aaKnown RBP eCLIP23.41■■□□□ 1.34
HOXA2-202ENST00000612779 C4AP0C0L4 1744 aa23.41■■□□□ 1.34
HOXA2-202ENST00000612779 CLEC4GQ6UXB4 293 aa23.41■■□□□ 1.34
HOXA2-202ENST00000612779 UPF1Q92900 1129 aaKnown RBP eCLIP23.41■■□□□ 1.34
HOXA2-202ENST00000612779 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.41■■□□□ 1.34
HOXA2-202ENST00000612779 CSF1RP07333 972 aa23.4■■□□□ 1.34
HOXA2-202ENST00000612779 SMIM5Q71RC9 77 aa23.4■■□□□ 1.34
HOXA2-202ENST00000612779 AMIGO3Q86WK7 504 aa23.4■■□□□ 1.34
HOXA2-202ENST00000612779 SIL1Q9H173 461 aa23.4■■□□□ 1.34
HOXA2-202ENST00000612779 GNPATO15228 680 aa23.4■■□□□ 1.34
HOXA2-202ENST00000612779 SUSD4Q5VX71 490 aa23.4■■□□□ 1.34
HOXA2-202ENST00000612779 TRMT112Q9UI30 125 aaKnown RBP23.4■■□□□ 1.34
HOXA2-202ENST00000612779 UBR3Q6ZT12 1888 aa23.39■■□□□ 1.34
HOXA2-202ENST00000612779 DDX60Q8IY21 1712 aaKnown RBP23.39■■□□□ 1.33
HOXA2-202ENST00000612779 LAMB2P55268 1798 aa23.39■■□□□ 1.33
HOXA2-202ENST00000612779 NUTM1Q86Y26 1132 aa23.39■■□□□ 1.33
HOXA2-202ENST00000612779 CCDC125Q86Z20 511 aa23.39■■□□□ 1.33
HOXA2-202ENST00000612779 AOX1Q06278 1338 aa23.39■■□□□ 1.33
HOXA2-202ENST00000612779 PARP10Q53GL7 1025 aa23.38■■□□□ 1.33
HOXA2-202ENST00000612779 ZNF652Q9Y2D9 606 aa23.38■■□□□ 1.33
HOXA2-202ENST00000612779 BCL2L12Q9HB09 334 aa23.38■■□□□ 1.33
HOXA2-202ENST00000612779 NARFQ9UHQ1 456 aa23.38■■□□□ 1.33
HOXA2-202ENST00000612779 USP42Q9H9J4 1324 aaKnown RBP23.37■■□□□ 1.33
HOXA2-202ENST00000612779 SLC27A3Q5K4L6 730 aa23.37■■□□□ 1.33
HOXA2-202ENST00000612779 TSHZ3Q63HK5 1081 aa23.37■■□□□ 1.33
HOXA2-202ENST00000612779 CLASRPQ8N2M8 674 aaKnown RBP23.37■■□□□ 1.33
HOXA2-202ENST00000612779 CHMP3Q9Y3E7 222 aa23.37■■□□□ 1.33
HOXA2-202ENST00000612779 RTCBQ9Y3I0 505 aaKnown RBP23.37■■□□□ 1.33
HOXA2-202ENST00000612779 IRS4O14654 1257 aaPredicted RBP23.36■■□□□ 1.33
HOXA2-202ENST00000612779 NIP7Q9Y221 180 aaKnown RBP eCLIP23.36■■□□□ 1.33
HOXA2-202ENST00000612779 SDSP20132 328 aa23.36■■□□□ 1.33
HOXA2-202ENST00000612779 COL24A1Q17RW2 1714 aa23.35■■□□□ 1.33
HOXA2-202ENST00000612779 NTSR2O95665 410 aa23.35■■□□□ 1.33
HOXA2-202ENST00000612779 TTLL11Q8NHH1 800 aa23.35■■□□□ 1.33
HOXA2-202ENST00000612779 UTP14AQ9BVJ6 771 aaKnown RBP23.35■■□□□ 1.33
HOXA2-202ENST00000612779 SH3TC1Q8TE82 1336 aa23.35■■□□□ 1.33
HOXA2-202ENST00000612779 ATG9AQ7Z3C6 839 aa23.34■■□□□ 1.33
HOXA2-202ENST00000612779 ARHGEF1Q92888 912 aaKnown RBP23.34■■□□□ 1.33
HOXA2-202ENST00000612779 EAF2Q96CJ1 260 aaPredicted RBP23.34■■□□□ 1.33
HOXA2-202ENST00000612779 TNS1Q9HBL0 1735 aaKnown RBP23.34■■□□□ 1.33
HOXA2-202ENST00000612779 PDE8AO60658 829 aa23.34■■□□□ 1.33
HOXA2-202ENST00000612779 CTSWP56202 376 aa23.34■■□□□ 1.33
HOXA2-202ENST00000612779 PROM2Q8N271 834 aa23.34■■□□□ 1.33
HOXA2-202ENST00000612779 PI4K2BQ8TCG2 481 aa23.34■■□□□ 1.33
HOXA2-202ENST00000612779 AK7Q96M32 723 aa23.34■■□□□ 1.33
HOXA2-202ENST00000612779 USPL1Q5W0Q7 1092 aa23.33■■□□□ 1.33
HOXA2-202ENST00000612779 TBC1D9Q6ZT07 1266 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms