RNA–Protein interactions for RNA: ENST00000612624.4

SMIM11B-201, Transcript of small integral membrane protein 11B, humanhuman

TSL 1 (best) BASIC

Gene SMIM11B, Length 1,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-201ENST00000612624 UBR2Q8IWV8 1755 aa10.52□□□□□ -0.72
SMIM11B-201ENST00000612624 TNRC18O15417 2968 aaPredicted RBP10.52□□□□□ -0.73
SMIM11B-201ENST00000612624 LOC102724428A0A0B4J2F2 783 aa10.52□□□□□ -0.73
SMIM11B-201ENST00000612624 GNPATO15228 680 aa10.52□□□□□ -0.73
SMIM11B-201ENST00000612624 SIK1P57059 783 aa10.52□□□□□ -0.73
SMIM11B-201ENST00000612624 MAP3K9P80192 1104 aa10.52□□□□□ -0.73
SMIM11B-201ENST00000612624 PARP3Q9Y6F1 533 aa10.52□□□□□ -0.73
SMIM11B-201ENST00000612624 PCDH11XQ9BZA7 1347 aa10.52□□□□□ -0.73
SMIM11B-201ENST00000612624 PCDH11YQ9BZA8 1340 aa10.52□□□□□ -0.73
SMIM11B-201ENST00000612624 MRC1P22897 1456 aa10.51□□□□□ -0.73
SMIM11B-201ENST00000612624 C4AP0C0L4 1744 aa10.51□□□□□ -0.73
SMIM11B-201ENST00000612624 C7P10643 843 aa10.51□□□□□ -0.73
SMIM11B-201ENST00000612624 GYS1P13807 737 aa10.51□□□□□ -0.73
SMIM11B-201ENST00000612624 PHKG2P15735 406 aa10.51□□□□□ -0.73
SMIM11B-201ENST00000612624 NEUROD2Q15784 382 aa10.51□□□□□ -0.73
SMIM11B-201ENST00000612624 NUDCQ9Y266 331 aa10.51□□□□□ -0.73
SMIM11B-201ENST00000612624 TRAPPC3LQ5T215 181 aa10.5□□□□□ -0.73
SMIM11B-201ENST00000612624 ZNF530Q6P9A1 599 aaPredicted RBP10.5□□□□□ -0.73
SMIM11B-201ENST00000612624 LDHDQ86WU2 507 aa10.5□□□□□ -0.73
SMIM11B-201ENST00000612624 OXER1Q8TDS5 423 aa10.5□□□□□ -0.73
SMIM11B-201ENST00000612624 TJP1Q07157 1748 aa10.5□□□□□ -0.73
SMIM11B-201ENST00000612624 ITGBL1O95965 494 aaPredicted RBP10.49□□□□□ -0.73
SMIM11B-201ENST00000612624 PLEKHO1Q53GL0 409 aaPredicted RBP10.49□□□□□ -0.73
SMIM11B-201ENST00000612624 MPRIPQ6WCQ1 1025 aa10.49□□□□□ -0.73
SMIM11B-201ENST00000612624 GCC1Q96CN9 775 aa10.49□□□□□ -0.73
SMIM11B-201ENST00000612624 MCOLN1Q9GZU1 580 aa10.49□□□□□ -0.73
SMIM11B-201ENST00000612624 LGR6Q9HBX8 967 aa10.49□□□□□ -0.73
SMIM11B-201ENST00000612624 METRNQ9UJH8 293 aa10.49□□□□□ -0.73
SMIM11B-201ENST00000612624 WDR33Q9C0J8 1336 aaKnown RBP10.49□□□□□ -0.73
SMIM11B-201ENST00000612624 SBF1O95248 1867 aa10.49□□□□□ -0.73
SMIM11B-201ENST00000612624 THSD7BQ9C0I4 1608 aa10.48□□□□□ -0.73
SMIM11B-201ENST00000612624 COL5A3P25940 1745 aaPredicted RBP10.48□□□□□ -0.73
SMIM11B-201ENST00000612624 CA12O43570 354 aa10.48□□□□□ -0.73
SMIM11B-201ENST00000612624 RASSF7Q02833 373 aa10.48□□□□□ -0.73
SMIM11B-201ENST00000612624 WDR43Q15061 677 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMIM11B-201ENST00000612624 DEFB115Q30KQ5 88 aa10.48□□□□□ -0.73
SMIM11B-201ENST00000612624 RC3H1Q5TC82 1133 aaKnown RBP10.48□□□□□ -0.73
SMIM11B-201ENST00000612624 PIGBQ92521 554 aa10.48□□□□□ -0.73
SMIM11B-201ENST00000612624 SPG7Q9UQ90 795 aa10.48□□□□□ -0.73
SMIM11B-201ENST00000612624 RRP7AQ9Y3A4 280 aaKnown RBP10.48□□□□□ -0.73
SMIM11B-201ENST00000612624 RTCBQ9Y3I0 505 aaKnown RBP10.48□□□□□ -0.73
SMIM11B-201ENST00000612624 IQCA1LA6NCM1 817 aa10.47□□□□□ -0.73
SMIM11B-201ENST00000612624 GRXCR2A6NFK2 248 aa10.47□□□□□ -0.73
SMIM11B-201ENST00000612624 CCER2I3L3R5 266 aa10.47□□□□□ -0.73
SMIM11B-201ENST00000612624 GPR37O15354 613 aa10.47□□□□□ -0.73
SMIM11B-201ENST00000612624 ITPK1Q13572 414 aa10.47□□□□□ -0.73
SMIM11B-201ENST00000612624 DCTN1Q14203 1278 aa10.47□□□□□ -0.73
SMIM11B-201ENST00000612624 IFNL2Q8IZJ0 200 aa10.47□□□□□ -0.73
SMIM11B-201ENST00000612624 FAM9BQ8IZU0 186 aa10.47□□□□□ -0.73
SMIM11B-201ENST00000612624 BEGAINQ9BUH8 593 aa10.47□□□□□ -0.73
SMIM11B-201ENST00000612624 POTEJP0CG39 1038 aa10.46□□□□□ -0.73
SMIM11B-201ENST00000612624 AMOTQ4VCS5 1084 aa10.46□□□□□ -0.73
SMIM11B-201ENST00000612624 AKAP4Q5JQC9 854 aa10.46□□□□□ -0.73
SMIM11B-201ENST00000612624 IL17REQ8NFR9 667 aa10.46□□□□□ -0.73
SMIM11B-201ENST00000612624 RUNDC1Q96C34 613 aa10.46□□□□□ -0.73
SMIM11B-201ENST00000612624 THUMPD2Q9BTF0 503 aaKnown RBP10.46□□□□□ -0.73
SMIM11B-201ENST00000612624 MYH14Q7Z406 1995 aaKnown RBP10.45□□□□□ -0.74
SMIM11B-201ENST00000612624 CEMIPQ8WUJ3 1361 aa10.45□□□□□ -0.74
SMIM11B-201ENST00000612624 CNTNAP4Q9C0A0 1308 aa10.45□□□□□ -0.74
SMIM11B-201ENST00000612624 NFKBIEO00221 500 aa10.45□□□□□ -0.74
SMIM11B-201ENST00000612624 RNMTO43148 476 aaKnown RBP10.45□□□□□ -0.74
SMIM11B-201ENST00000612624 TMPOP42166 694 aaKnown RBP10.45□□□□□ -0.74
SMIM11B-201ENST00000612624 NFE2L2Q16236 605 aa10.45□□□□□ -0.74
SMIM11B-201ENST00000612624 C3orf67Q6ZVT6 689 aa10.45□□□□□ -0.74
SMIM11B-201ENST00000612624 MCM10Q7L590 875 aa10.45□□□□□ -0.74
SMIM11B-201ENST00000612624 ZNF831Q5JPB2 1677 aa10.44□□□□□ -0.74
SMIM11B-201ENST00000612624 APAF1O14727 1248 aa10.44□□□□□ -0.74
SMIM11B-201ENST00000612624 RPS6KA4O75676 772 aa10.44□□□□□ -0.74
SMIM11B-201ENST00000612624 CHRNA5P30532 468 aa10.44□□□□□ -0.74
SMIM11B-201ENST00000612624 RFC4P35249 363 aa10.44□□□□□ -0.74
SMIM11B-201ENST00000612624 ATP6V1AP38606 617 aa10.44□□□□□ -0.74
SMIM11B-201ENST00000612624 KRI1Q8N9T8 703 aaKnown RBP10.44□□□□□ -0.74
SMIM11B-201ENST00000612624 GAS2L2Q8NHY3 880 aa10.44□□□□□ -0.74
SMIM11B-201ENST00000612624 LAMB4A4D0S4 1761 aa10.44□□□□□ -0.74
SMIM11B-201ENST00000612624 LTBP3Q9NS15 1303 aa10.43□□□□□ -0.74
SMIM11B-201ENST00000612624 GNAT3A8MTJ3 354 aa10.43□□□□□ -0.74
SMIM11B-201ENST00000612624 MAP2K2P36507 400 aa10.43□□□□□ -0.74
SMIM11B-201ENST00000612624 ECE1P42892 770 aa10.43□□□□□ -0.74
SMIM11B-201ENST00000612624 C1orf141Q5JVX7 400 aa10.43□□□□□ -0.74
SMIM11B-201ENST00000612624 MAPK8IP3Q9UPT6 1336 aa10.42□□□□□ -0.74
SMIM11B-201ENST00000612624 TBC1D12O60347 775 aa10.42□□□□□ -0.74
SMIM11B-201ENST00000612624 OSBPP22059 807 aa10.42□□□□□ -0.74
SMIM11B-201ENST00000612624 DDR1Q08345 913 aa10.42□□□□□ -0.74
SMIM11B-201ENST00000612624 TTLL6Q8N841 843 aa10.42□□□□□ -0.74
SMIM11B-201ENST00000612624 TAF1DQ9H5J8 278 aaPredicted RBP10.42□□□□□ -0.74
SMIM11B-201ENST00000612624 POLRMTO00411 1230 aaKnown RBP10.41□□□□□ -0.74
SMIM11B-201ENST00000612624 KCNQ3O43525 872 aa10.41□□□□□ -0.74
SMIM11B-201ENST00000612624 EVI5O60447 810 aa10.41□□□□□ -0.74
SMIM11B-201ENST00000612624 RIPK4P57078 832 aa10.41□□□□□ -0.74
SMIM11B-201ENST00000612624 SLC39A6Q13433 755 aa10.41□□□□□ -0.74
SMIM11B-201ENST00000612624 ERFEQ4G0M1 354 aa10.41□□□□□ -0.74
SMIM11B-201ENST00000612624 NPM2Q86SE8 214 aaKnown RBP10.41□□□□□ -0.74
SMIM11B-201ENST00000612624 NFATC2IPQ8NCF5 419 aa10.41□□□□□ -0.74
SMIM11B-201ENST00000612624 PTCD2Q8WV60 388 aaKnown RBP10.41□□□□□ -0.74
SMIM11B-201ENST00000612624 SLC52A2Q9HAB3 445 aa10.41□□□□□ -0.74
SMIM11B-201ENST00000612624 ASAP1Q9ULH1 1129 aa10.41□□□□□ -0.74
SMIM11B-201ENST00000612624 TIAM2Q8IVF5 1701 aa10.41□□□□□ -0.74
SMIM11B-201ENST00000612624 USP42Q9H9J4 1324 aaKnown RBP10.4□□□□□ -0.74
SMIM11B-201ENST00000612624 TM4SF1P30408 202 aa10.4□□□□□ -0.74
SMIM11B-201ENST00000612624 DDX12PQ92771 950 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms