RNA–Protein interactions for RNA: ENST00000612292.1

MMP28-202, Transcript of matrix metallopeptidase 28, humanhuman

TSL 5

Gene MMP28, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-202ENST00000612292 RIC1Q4ADV7 1423 aa23.89■■□□□ 1.41
MMP28-202ENST00000612292 TNRC6CQ9HCJ0 1690 aaKnown RBP23.89■■□□□ 1.41
MMP28-202ENST00000612292 LMNB1P20700 586 aa23.88■■□□□ 1.41
MMP28-202ENST00000612292 NLRP10Q86W26 655 aa23.88■■□□□ 1.41
MMP28-202ENST00000612292 FAM9BQ8IZU0 186 aa23.88■■□□□ 1.41
MMP28-202ENST00000612292 TSR2Q969E8 191 aaKnown RBP23.88■■□□□ 1.41
MMP28-202ENST00000612292 UTP14AQ9BVJ6 771 aaKnown RBP23.88■■□□□ 1.41
MMP28-202ENST00000612292 ALDH1B1P30837 517 aa23.87■■□□□ 1.41
MMP28-202ENST00000612292 HOXA10P31260 410 aaPredicted RBP23.86■■□□□ 1.41
MMP28-202ENST00000612292 WDR63Q8IWG1 891 aa23.86■■□□□ 1.41
MMP28-202ENST00000612292 PHAXQ9H814 394 aaKnown RBP23.86■■□□□ 1.41
MMP28-202ENST00000612292 KIF3CO14782 793 aa23.85■■□□□ 1.41
MMP28-202ENST00000612292 ISCA1Q9BUE6 129 aa23.85■■□□□ 1.41
MMP28-202ENST00000612292 SALL2Q9Y467 1007 aaPredicted RBP23.85■■□□□ 1.41
MMP28-202ENST00000612292 LTBP3Q9NS15 1303 aa23.84■■□□□ 1.41
MMP28-202ENST00000612292 SOGA3Q5TF21 947 aa23.84■■□□□ 1.41
MMP28-202ENST00000612292 CCDC30Q5VVM6 783 aa23.84■■□□□ 1.41
MMP28-202ENST00000612292 C3orf67Q6ZVT6 689 aa23.84■■□□□ 1.41
MMP28-202ENST00000612292 CHMP4AQ9BY43 222 aa23.84■■□□□ 1.41
MMP28-202ENST00000612292 DICER1Q9UPY3 1922 aaKnown RBP23.84■■□□□ 1.41
MMP28-202ENST00000612292 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
MMP28-202ENST00000612292 SYNE4Q8N205 404 aa23.83■■□□□ 1.41
MMP28-202ENST00000612292 NLRP3Q96P20 1036 aa23.83■■□□□ 1.41
MMP28-202ENST00000612292 ZC3H4Q9UPT8 1303 aaKnown RBP23.83■■□□□ 1.4
MMP28-202ENST00000612292 TRIM28Q13263 835 aaKnown RBP23.82■■□□□ 1.4
MMP28-202ENST00000612292 CRAMP1Q96RY5 1269 aa23.81■■□□□ 1.4
MMP28-202ENST00000612292 TRMT112Q9UI30 125 aaKnown RBP23.81■■□□□ 1.4
MMP28-202ENST00000612292 TWISTNBQ3B726 338 aaPredicted RBP23.8■■□□□ 1.4
MMP28-202ENST00000612292 CCDC93Q567U6 631 aa23.8■■□□□ 1.4
MMP28-202ENST00000612292 OLFM4Q6UX06 510 aa23.8■■□□□ 1.4
MMP28-202ENST00000612292 TAOK3Q9H2K8 898 aa23.8■■□□□ 1.4
MMP28-202ENST00000612292 NMRK2Q9NPI5 230 aa23.8■■□□□ 1.4
MMP28-202ENST00000612292 ATP5J2-PTCD1G3V325 749 aa23.79■■□□□ 1.4
MMP28-202ENST00000612292 RIC3Q7Z5B4 369 aa23.79■■□□□ 1.4
MMP28-202ENST00000612292 RPGRQ92834 1020 aaKnown RBP23.79■■□□□ 1.4
MMP28-202ENST00000612292 RBM17Q96I25 401 aaKnown RBP23.79■■□□□ 1.4
MMP28-202ENST00000612292 SPINK5Q9NQ38 1064 aaPredicted RBP23.79■■□□□ 1.4
MMP28-202ENST00000612292 LAMB2P55268 1798 aa23.78■■□□□ 1.4
MMP28-202ENST00000612292 HCLS1P14317 486 aaPredicted RBP23.78■■□□□ 1.4
MMP28-202ENST00000612292 RTKN2Q8IZC4 609 aa23.78■■□□□ 1.4
MMP28-202ENST00000612292 KDM2BQ8NHM5 1336 aa23.78■■□□□ 1.4
MMP28-202ENST00000612292 SH3TC1Q8TE82 1336 aa23.78■■□□□ 1.4
MMP28-202ENST00000612292 FANCIQ9NVI1 1328 aa23.78■■□□□ 1.4
MMP28-202ENST00000612292 GLTPD2A6NH11 291 aa23.77■■□□□ 1.4
MMP28-202ENST00000612292 GOLGA2Q08379 1002 aa23.77■■□□□ 1.4
MMP28-202ENST00000612292 SNED1Q8TER0 1413 aa23.76■■□□□ 1.39
MMP28-202ENST00000612292 VAMP4O75379 141 aa23.76■■□□□ 1.39
MMP28-202ENST00000612292 FKBP4Q02790 459 aaKnown RBP eCLIP23.76■■□□□ 1.39
MMP28-202ENST00000612292 ZNF428Q96B54 188 aa23.76■■□□□ 1.39
MMP28-202ENST00000612292 TIAM2Q8IVF5 1701 aa23.76■■□□□ 1.39
MMP28-202ENST00000612292 CC2D2BQ6DHV5 1058 aa23.75■■□□□ 1.39
MMP28-202ENST00000612292 FAM89AQ96GI7 184 aa23.75■■□□□ 1.39
MMP28-202ENST00000612292 RRAGCQ9HB90 399 aa23.75■■□□□ 1.39
MMP28-202ENST00000612292 DDX60Q8IY21 1712 aaKnown RBP23.74■■□□□ 1.39
MMP28-202ENST00000612292 TCERG1O14776 1098 aaKnown RBP23.74■■□□□ 1.39
MMP28-202ENST00000612292 CACNA1FO60840 1977 aa23.74■■□□□ 1.39
MMP28-202ENST00000612292 DDX58O95786 925 aaKnown RBP23.73■■□□□ 1.39
MMP28-202ENST00000612292 SLC4A2P04920 1241 aa23.73■■□□□ 1.39
MMP28-202ENST00000612292 EXOSC9Q06265 439 aaKnown RBP23.73■■□□□ 1.39
MMP28-202ENST00000612292 METTL22Q9BUU2 404 aaPredicted RBP23.73■■□□□ 1.39
MMP28-202ENST00000612292 STK31Q9BXU1 1019 aa23.73■■□□□ 1.39
MMP28-202ENST00000612292 ZNF521Q96K83 1311 aa23.73■■□□□ 1.39
MMP28-202ENST00000612292 TOMM70O94826 608 aa23.72■■□□□ 1.39
MMP28-202ENST00000612292 KSR2Q6VAB6 950 aa23.72■■□□□ 1.39
MMP28-202ENST00000612292 G2E3Q7L622 706 aa23.72■■□□□ 1.39
MMP28-202ENST00000612292 PSMD1Q99460 953 aa23.72■■□□□ 1.39
MMP28-202ENST00000612292 MYD88Q99836 296 aa23.72■■□□□ 1.39
MMP28-202ENST00000612292 TAF1P21675 1872 aa23.72■■□□□ 1.39
MMP28-202ENST00000612292 ABCC4O15439 1325 aa23.71■■□□□ 1.39
MMP28-202ENST00000612292 BBOX1O75936 387 aa23.71■■□□□ 1.39
MMP28-202ENST00000612292 GRIPAP1Q4V328 841 aa23.71■■□□□ 1.39
MMP28-202ENST00000612292 DPY19L2Q6NUT2 758 aa23.71■■□□□ 1.39
MMP28-202ENST00000612292 SLC51AQ86UW1 340 aa23.71■■□□□ 1.39
MMP28-202ENST00000612292 CCDC191Q8NCU4 936 aa23.71■■□□□ 1.39
MMP28-202ENST00000612292 ZNF277Q9NRM2 450 aaPredicted RBP23.71■■□□□ 1.39
MMP28-202ENST00000612292 PI4KAP2A4QPH2 592 aa23.7■■□□□ 1.38
MMP28-202ENST00000612292 POTECB2RU33 542 aa23.7■■□□□ 1.38
MMP28-202ENST00000612292 PPEF1O14829 653 aaPredicted RBP23.7■■□□□ 1.38
MMP28-202ENST00000612292 SF3B3Q15393 1217 aaKnown RBP23.7■■□□□ 1.38
MMP28-202ENST00000612292 PI4KAP1Q8N8J0 262 aa23.7■■□□□ 1.38
MMP28-202ENST00000612292 ZBTB38Q8NAP3 1195 aaPredicted RBP23.7■■□□□ 1.38
MMP28-202ENST00000612292 MAP3K2Q9Y2U5 619 aa23.7■■□□□ 1.38
MMP28-202ENST00000612292 ATP6V0A2Q9Y487 856 aa23.7■■□□□ 1.38
MMP28-202ENST00000612292 CCER2I3L3R5 266 aa23.69■■□□□ 1.38
MMP28-202ENST00000612292 IRS4O14654 1257 aaPredicted RBP23.68■■□□□ 1.38
MMP28-202ENST00000612292 RTL5Q5HYW3 569 aaPredicted RBP23.68■■□□□ 1.38
MMP28-202ENST00000612292 DDX46Q7L014 1031 aaKnown RBP23.68■■□□□ 1.38
MMP28-202ENST00000612292 MYH16Q9H6N6 1097 aa23.68■■□□□ 1.38
MMP28-202ENST00000612292 PCCAP05165 728 aaPredicted RBP23.67■■□□□ 1.38
MMP28-202ENST00000612292 IGKV5-2P06315 115 aa23.67■■□□□ 1.38
MMP28-202ENST00000612292 VEGFAP15692 232 aaPredicted RBP23.67■■□□□ 1.38
MMP28-202ENST00000612292 IARSP41252 1262 aaKnown RBP23.67■■□□□ 1.38
MMP28-202ENST00000612292 SP8Q8IXZ3 490 aa23.67■■□□□ 1.38
MMP28-202ENST00000612292 WDR90Q96KV7 1748 aa23.67■■□□□ 1.38
MMP28-202ENST00000612292 GRAPQ13588 217 aa23.66■■□□□ 1.38
MMP28-202ENST00000612292 GRAPLQ8TC17 118 aaPredicted RBP23.66■■□□□ 1.38
MMP28-202ENST00000612292 CWC25Q9NXE8 425 aaPredicted RBP23.66■■□□□ 1.38
MMP28-202ENST00000612292 DDNO94850 711 aaPredicted RBP23.65■■□□□ 1.38
MMP28-202ENST00000612292 RBM46Q8TBY0 533 aaKnown RBP23.65■■□□□ 1.38
MMP28-202ENST00000612292 FZD9O00144 591 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms