RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 VGLL3A8MV65 326 aa16.7■□□□□ 0.26
HOXA3-207ENST00000612286 DMTNQ08495 405 aa16.7■□□□□ 0.26
HOXA3-207ENST00000612286 OTUD7BQ6GQQ9 843 aa16.7■□□□□ 0.26
HOXA3-207ENST00000612286 ZNF589Q86UQ0 364 aaPredicted RBP16.7■□□□□ 0.26
HOXA3-207ENST00000612286 RUFY2Q8WXA3 655 aa16.7■□□□□ 0.26
HOXA3-207ENST00000612286 GLRX3O76003 335 aaKnown RBP16.69■□□□□ 0.26
HOXA3-207ENST00000612286 NCOA5Q9HCD5 579 aaKnown RBP16.69■□□□□ 0.26
HOXA3-207ENST00000612286 PIK3C2BO00750 1634 aa16.69■□□□□ 0.26
HOXA3-207ENST00000612286 G3BP1Q13283 466 aaKnown RBP eCLIP16.69■□□□□ 0.26
HOXA3-207ENST00000612286 SSH3Q8TE77 659 aa16.69■□□□□ 0.26
HOXA3-207ENST00000612286 BRF1Q92994 677 aa16.69■□□□□ 0.26
HOXA3-207ENST00000612286 ECHDC1Q9NTX5 307 aa16.69■□□□□ 0.26
HOXA3-207ENST00000612286 SLC39A6Q13433 755 aa16.69■□□□□ 0.26
HOXA3-207ENST00000612286 OSCARQ8IYS5 282 aa16.68■□□□□ 0.26
HOXA3-207ENST00000612286 ZFP91Q96JP5 570 aaPredicted RBP16.68■□□□□ 0.26
HOXA3-207ENST00000612286 STAP2Q9UGK3 403 aa16.68■□□□□ 0.26
HOXA3-207ENST00000612286 ZNF330Q9Y3S2 320 aaPredicted RBP16.68■□□□□ 0.26
HOXA3-207ENST00000612286 ALKQ9UM73 1620 aa16.68■□□□□ 0.26
HOXA3-207ENST00000612286 LETM1O95202 739 aaPredicted RBP16.68■□□□□ 0.26
HOXA3-207ENST00000612286 DDX46Q7L014 1031 aaKnown RBP16.68■□□□□ 0.26
HOXA3-207ENST00000612286 CRB1P82279 1406 aa16.68■□□□□ 0.26
HOXA3-207ENST00000612286 ABCA9Q8IUA7 1624 aa16.68■□□□□ 0.26
HOXA3-207ENST00000612286 NCBP1Q09161 790 aaKnown RBP16.68■□□□□ 0.26
HOXA3-207ENST00000612286 BTBD11A6QL63 1104 aa16.67■□□□□ 0.26
HOXA3-207ENST00000612286 EAF2Q96CJ1 260 aaPredicted RBP16.67■□□□□ 0.26
HOXA3-207ENST00000612286 KIAA0232Q92628 1395 aa16.67■□□□□ 0.26
HOXA3-207ENST00000612286 DLG5Q8TDM6 1919 aa16.67■□□□□ 0.26
HOXA3-207ENST00000612286 CCDC85AQ96PX6 553 aaPredicted RBP16.67■□□□□ 0.26
HOXA3-207ENST00000612286 ROBO2Q9HCK4 1378 aa16.67■□□□□ 0.26
HOXA3-207ENST00000612286 CDK12Q9NYV4 1490 aaPredicted RBP16.66■□□□□ 0.26
HOXA3-207ENST00000612286 SLC27A2O14975 620 aa16.66■□□□□ 0.26
HOXA3-207ENST00000612286 ZSCAN25Q6NSZ9 544 aa16.66■□□□□ 0.26
HOXA3-207ENST00000612286 ZNF530Q6P9A1 599 aaPredicted RBP16.66■□□□□ 0.26
HOXA3-207ENST00000612286 C11orf57Q6ZUT1 292 aaPredicted RBP16.66■□□□□ 0.26
HOXA3-207ENST00000612286 GPATCH3Q96I76 525 aa16.66■□□□□ 0.26
HOXA3-207ENST00000612286 CCDC171Q6TFL3 1326 aa16.66■□□□□ 0.26
HOXA3-207ENST00000612286 ME1P48163 572 aa16.66■□□□□ 0.26
HOXA3-207ENST00000612286 HSP90AB3PQ58FF7 597 aa16.66■□□□□ 0.26
HOXA3-207ENST00000612286 NEUROD6Q96NK8 337 aa16.66■□□□□ 0.26
HOXA3-207ENST00000612286 LEO1Q8WVC0 666 aaPredicted RBP16.66■□□□□ 0.26
HOXA3-207ENST00000612286 SMC2O95347 1197 aa16.65■□□□□ 0.26
HOXA3-207ENST00000612286 ZNF215Q9UL58 517 aaPredicted RBP16.65■□□□□ 0.26
HOXA3-207ENST00000612286 KIF24Q5T7B8 1368 aa16.65■□□□□ 0.26
HOXA3-207ENST00000612286 ELF2Q15723 593 aa16.65■□□□□ 0.26
HOXA3-207ENST00000612286 PGBD1Q96JS3 809 aa16.64■□□□□ 0.26
HOXA3-207ENST00000612286 FUCA2Q9BTY2 467 aa16.64■□□□□ 0.26
HOXA3-207ENST00000612286 BICC1Q9H694 974 aaKnown RBP16.64■□□□□ 0.26
HOXA3-207ENST00000612286 ATP7BP35670 1465 aa16.64■□□□□ 0.26
HOXA3-207ENST00000612286 RIMS1Q86UR5 1692 aaKnown RBP16.64■□□□□ 0.26
HOXA3-207ENST00000612286 A0A0G2JLW4 131 aa16.64■□□□□ 0.25
HOXA3-207ENST00000612286 ATP5J2-PTCD1G3V325 749 aa16.64■□□□□ 0.25
HOXA3-207ENST00000612286 PTCD1O75127 700 aaKnown RBP16.64■□□□□ 0.25
HOXA3-207ENST00000612286 POLR3DP05423 398 aaPredicted RBP16.64■□□□□ 0.25
HOXA3-207ENST00000612286 SKILP12757 684 aa16.64■□□□□ 0.25
HOXA3-207ENST00000612286 ZNF75DP51815 510 aa16.64■□□□□ 0.25
HOXA3-207ENST00000612286 GOLGA8FQ08AF8 430 aa16.64■□□□□ 0.25
HOXA3-207ENST00000612286 GOLGA8DPQ0D2H9 430 aa16.64■□□□□ 0.25
HOXA3-207ENST00000612286 ZRSR1Q15695 479 aaKnown RBP16.64■□□□□ 0.25
HOXA3-207ENST00000612286 SDF4Q9BRK5 362 aa16.64■□□□□ 0.25
HOXA3-207ENST00000612286 GJB4Q9NTQ9 266 aa16.64■□□□□ 0.25
HOXA3-207ENST00000612286 CEP135Q66GS9 1140 aa16.64■□□□□ 0.25
HOXA3-207ENST00000612286 RIC3Q7Z5B4 369 aa16.64■□□□□ 0.25
HOXA3-207ENST00000612286 AMOTL2Q9Y2J4 779 aa16.64■□□□□ 0.25
HOXA3-207ENST00000612286 LTKP29376 864 aa16.63■□□□□ 0.25
HOXA3-207ENST00000612286 GTF3C6Q969F1 213 aa16.63■□□□□ 0.25
HOXA3-207ENST00000612286 VPS53Q5VIR6 699 aa16.63■□□□□ 0.25
HOXA3-207ENST00000612286 Q6ZUG5 572 aa16.63■□□□□ 0.25
HOXA3-207ENST00000612286 AOPEPQ8N6M6 819 aa16.63■□□□□ 0.25
HOXA3-207ENST00000612286 SUCLG2Q96I99 432 aa16.63■□□□□ 0.25
HOXA3-207ENST00000612286 SPTLC3Q9NUV7 552 aa16.63■□□□□ 0.25
HOXA3-207ENST00000612286 CPSF1Q10570 1443 aaKnown RBP16.62■□□□□ 0.25
HOXA3-207ENST00000612286 HAND2P61296 217 aa16.62■□□□□ 0.25
HOXA3-207ENST00000612286 BEND3Q5T5X7 828 aa16.62■□□□□ 0.25
HOXA3-207ENST00000612286 LMTK2Q8IWU2 1503 aa16.62■□□□□ 0.25
HOXA3-207ENST00000612286 APOBRQ0VD83 1088 aa16.62■□□□□ 0.25
HOXA3-207ENST00000612286 HOMER1Q86YM7 354 aa16.62■□□□□ 0.25
HOXA3-207ENST00000612286 CCAR1Q8IX12 1150 aaKnown RBP16.62■□□□□ 0.25
HOXA3-207ENST00000612286 HOXC9P31274 260 aa16.61■□□□□ 0.25
HOXA3-207ENST00000612286 SF3A1Q15459 793 aaKnown RBP16.61■□□□□ 0.25
HOXA3-207ENST00000612286 CCAR2Q8N163 923 aaKnown RBP16.61■□□□□ 0.25
HOXA3-207ENST00000612286 ZSWIM6Q9HCJ5 1215 aa16.61■□□□□ 0.25
HOXA3-207ENST00000612286 AATKQ6ZMQ8 1374 aa16.61■□□□□ 0.25
HOXA3-207ENST00000612286 A0A1B0GVL5 298 aa16.61■□□□□ 0.25
HOXA3-207ENST00000612286 NBPF6Q5VWK0 638 aa16.61■□□□□ 0.25
HOXA3-207ENST00000612286 NBPF4Q96M43 638 aa16.61■□□□□ 0.25
HOXA3-207ENST00000612286 PTPN14Q15678 1187 aa16.61■□□□□ 0.25
HOXA3-207ENST00000612286 GPHNQ9NQX3 736 aaPredicted RBP16.61■□□□□ 0.25
HOXA3-207ENST00000612286 CCDC69A6NI79 296 aa16.6■□□□□ 0.25
HOXA3-207ENST00000612286 POLR3GO15318 223 aaPredicted RBP16.6■□□□□ 0.25
HOXA3-207ENST00000612286 REREQ9P2R6 1566 aa16.6■□□□□ 0.25
HOXA3-207ENST00000612286 MLH3Q9UHC1 1453 aa16.6■□□□□ 0.25
HOXA3-207ENST00000612286 HECW2Q9P2P5 1572 aa16.6■□□□□ 0.25
HOXA3-207ENST00000612286 ZSCAN31Q96LW9 406 aaPredicted RBP16.6■□□□□ 0.25
HOXA3-207ENST00000612286 SH2B1Q9NRF2 756 aaPredicted RBP16.6■□□□□ 0.25
HOXA3-207ENST00000612286 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
HOXA3-207ENST00000612286 SASH1O94885 1247 aa16.59■□□□□ 0.25
HOXA3-207ENST00000612286 NECTIN1Q15223 517 aa16.59■□□□□ 0.25
HOXA3-207ENST00000612286 TMEM87AQ8NBN3 555 aa16.59■□□□□ 0.25
HOXA3-207ENST00000612286 LRRN4CLQ8ND94 238 aa16.59■□□□□ 0.25
HOXA3-207ENST00000612286 EPC1Q9H2F5 836 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms