RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 ATP5J2-PTCD1G3V325 749 aa33.43■■■□□ 2.94
VEGFA-226ENST00000611736 STYK1Q6J9G0 422 aa33.43■■■□□ 2.94
VEGFA-226ENST00000611736 MASTLQ96GX5 879 aa33.43■■■□□ 2.94
VEGFA-226ENST00000611736 SLC4A2P04920 1241 aa33.42■■■□□ 2.94
VEGFA-226ENST00000611736 CACNA1SQ13698 1873 aa33.42■■■□□ 2.94
VEGFA-226ENST00000611736 KLRG2A4D1S0 409 aaPredicted RBP33.41■■■□□ 2.94
VEGFA-226ENST00000611736 DDX58O95786 925 aaKnown RBP33.41■■■□□ 2.94
VEGFA-226ENST00000611736 E9PSI1 815 aa33.4■■■□□ 2.94
VEGFA-226ENST00000611736 NPR1P16066 1061 aa33.4■■■□□ 2.94
VEGFA-226ENST00000611736 G2E3Q7L622 706 aa33.4■■■□□ 2.94
VEGFA-226ENST00000611736 CNKSR1Q969H4 720 aa33.4■■■□□ 2.94
VEGFA-226ENST00000611736 ISCA1Q9BUE6 129 aa33.4■■■□□ 2.94
VEGFA-226ENST00000611736 ZNF219Q9P2Y4 722 aaPredicted RBP33.39■■■□□ 2.94
VEGFA-226ENST00000611736 TRMT112Q9UI30 125 aaKnown RBP33.39■■■□□ 2.94
VEGFA-226ENST00000611736 CACNA1FO60840 1977 aa33.38■■■□□ 2.93
VEGFA-226ENST00000611736 RIC1Q4ADV7 1423 aa33.37■■■□□ 2.93
VEGFA-226ENST00000611736 SLX4Q8IY92 1834 aa33.37■■■□□ 2.93
VEGFA-226ENST00000611736 CDCA7LQ96GN5 454 aa33.37■■■□□ 2.93
VEGFA-226ENST00000611736 MYD88Q99836 296 aa33.37■■■□□ 2.93
VEGFA-226ENST00000611736 RNF123Q5XPI4 1314 aa33.36■■■□□ 2.93
VEGFA-226ENST00000611736 SLFN5Q08AF3 891 aa33.36■■■□□ 2.93
VEGFA-226ENST00000611736 PRPF40BQ6NWY9 871 aaKnown RBP33.36■■■□□ 2.93
VEGFA-226ENST00000611736 SYNE4Q8N205 404 aa33.36■■■□□ 2.93
VEGFA-226ENST00000611736 MAP3K2Q9Y2U5 619 aa33.36■■■□□ 2.93
VEGFA-226ENST00000611736 C3orf67Q6ZVT6 689 aa33.35■■■□□ 2.93
VEGFA-226ENST00000611736 SH3TC1Q8TE82 1336 aa33.34■■■□□ 2.93
VEGFA-226ENST00000611736 PI4KAP2A4QPH2 592 aa33.34■■■□□ 2.93
VEGFA-226ENST00000611736 C21orf2O43822 256 aa33.34■■■□□ 2.93
VEGFA-226ENST00000611736 CRY2Q49AN0 593 aa33.34■■■□□ 2.93
VEGFA-226ENST00000611736 KSR2Q6VAB6 950 aa33.34■■■□□ 2.93
VEGFA-226ENST00000611736 PI4KAP1Q8N8J0 262 aa33.34■■■□□ 2.93
VEGFA-226ENST00000611736 HCLS1P14317 486 aaPredicted RBP33.33■■■□□ 2.93
VEGFA-226ENST00000611736 FLIIQ13045 1269 aa33.33■■■□□ 2.93
VEGFA-226ENST00000611736 SLC10A5Q5PT55 438 aa33.33■■■□□ 2.93
VEGFA-226ENST00000611736 RPGRQ92834 1020 aaKnown RBP33.33■■■□□ 2.93
VEGFA-226ENST00000611736 METTL22Q9BUU2 404 aaPredicted RBP33.33■■■□□ 2.93
VEGFA-226ENST00000611736 ADCY9O60503 1353 aa33.33■■■□□ 2.93
VEGFA-226ENST00000611736 TRIM28Q13263 835 aaKnown RBP33.32■■■□□ 2.92
VEGFA-226ENST00000611736 NLRP3Q96P20 1036 aa33.32■■■□□ 2.92
VEGFA-226ENST00000611736 RASSF7Q02833 373 aa33.3■■■□□ 2.92
VEGFA-226ENST00000611736 FKBP5Q13451 457 aaPredicted RBP33.3■■■□□ 2.92
VEGFA-226ENST00000611736 RTL5Q5HYW3 569 aaPredicted RBP33.3■■■□□ 2.92
VEGFA-226ENST00000611736 FAM89AQ96GI7 184 aa33.3■■■□□ 2.92
VEGFA-226ENST00000611736 ALDH1B1P30837 517 aa33.28■■■□□ 2.92
VEGFA-226ENST00000611736 LAMB2P55268 1798 aa33.27■■■□□ 2.92
VEGFA-226ENST00000611736 CCDC191Q8NCU4 936 aa33.27■■■□□ 2.92
VEGFA-226ENST00000611736 C9orf131Q5VYM1 1079 aa33.26■■■□□ 2.91
VEGFA-226ENST00000611736 RBM17Q96I25 401 aaKnown RBP33.26■■■□□ 2.91
VEGFA-226ENST00000611736 CWC25Q9NXE8 425 aaPredicted RBP33.26■■■□□ 2.91
VEGFA-226ENST00000611736 SBF1O95248 1867 aa33.26■■■□□ 2.91
VEGFA-226ENST00000611736 DDX60Q8IY21 1712 aaKnown RBP33.25■■■□□ 2.91
VEGFA-226ENST00000611736 NFKBIEO00221 500 aa33.25■■■□□ 2.91
VEGFA-226ENST00000611736 HOXA10P31260 410 aaPredicted RBP33.25■■■□□ 2.91
VEGFA-226ENST00000611736 HNRNPUQ00839 825 aaKnown RBP eCLIP33.25■■■□□ 2.918e-7■□□□□ 10.9
VEGFA-226ENST00000611736 NEXNQ0ZGT2 675 aa33.25■■■□□ 2.91
VEGFA-226ENST00000611736 TRMT2AQ8IZ69 625 aaKnown RBP33.24■■■□□ 2.91
VEGFA-226ENST00000611736 RNF181Q9P0P0 153 aa33.24■■■□□ 2.91
VEGFA-226ENST00000611736 FER1L6Q2WGJ9 1857 aa33.23■■■□□ 2.91
VEGFA-226ENST00000611736 IGKV5-2P06315 115 aa33.23■■■□□ 2.91
VEGFA-226ENST00000611736 SOGA3Q5TF21 947 aa33.23■■■□□ 2.91
VEGFA-226ENST00000611736 ZBTB38Q8NAP3 1195 aaPredicted RBP33.23■■■□□ 2.91
VEGFA-226ENST00000611736 C7orf43Q8WVR3 580 aa33.23■■■□□ 2.91
VEGFA-226ENST00000611736 IRS4O14654 1257 aaPredicted RBP33.22■■■□□ 2.91
VEGFA-226ENST00000611736 OLFM4Q6UX06 510 aa33.22■■■□□ 2.91
VEGFA-226ENST00000611736 DNAAF4Q8WXU2 420 aa33.22■■■□□ 2.91
VEGFA-226ENST00000611736 JARID2Q92833 1246 aaPredicted RBP33.22■■■□□ 2.91
VEGFA-226ENST00000611736 CRAMP1Q96RY5 1269 aa33.22■■■□□ 2.91
VEGFA-226ENST00000611736 CWF19L2Q2TBE0 894 aaKnown RBP33.21■■■□□ 2.91
VEGFA-226ENST00000611736 CCDC93Q567U6 631 aa33.2■■■□□ 2.91
VEGFA-226ENST00000611736 CCDC88AQ3V6T2 1871 aa33.2■■■□□ 2.9
VEGFA-226ENST00000611736 NEURL1BA8MQ27 555 aa33.19■■■□□ 2.9
VEGFA-226ENST00000611736 PCCAP05165 728 aaPredicted RBP33.19■■■□□ 2.9
VEGFA-226ENST00000611736 PRELPP51888 382 aa33.19■■■□□ 2.9
VEGFA-226ENST00000611736 F6X3S4 739 aa33.18■■■□□ 2.9
VEGFA-226ENST00000611736 LMNB1P20700 586 aa33.18■■■□□ 2.9
VEGFA-226ENST00000611736 ZNF526Q8TF50 670 aaPredicted RBP33.18■■■□□ 2.9
VEGFA-226ENST00000611736 TAOK3Q9H2K8 898 aa33.18■■■□□ 2.9
VEGFA-226ENST00000611736 ABCC4O15439 1325 aa33.18■■■□□ 2.9
VEGFA-226ENST00000611736 PPEF1O14829 653 aaPredicted RBP33.17■■■□□ 2.9
VEGFA-226ENST00000611736 DDX46Q7L014 1031 aaKnown RBP33.17■■■□□ 2.9
VEGFA-226ENST00000611736 MRPL50Q8N5N7 158 aaKnown RBP33.16■■■□□ 2.9
VEGFA-226ENST00000611736 SLC51AQ86UW1 340 aa33.15■■■□□ 2.9
VEGFA-226ENST00000611736 SSH1Q8WYL5 1049 aa33.15■■■□□ 2.9
VEGFA-226ENST00000611736 BCL2L13Q9BXK5 485 aa33.15■■■□□ 2.9
VEGFA-226ENST00000611736 TAF1P21675 1872 aa33.14■■■□□ 2.9
VEGFA-226ENST00000611736 LTBP3Q9NS15 1303 aa33.14■■■□□ 2.9
VEGFA-226ENST00000611736 HSP90B1P14625 803 aaKnown RBP33.13■■■□□ 2.89
VEGFA-226ENST00000611736 SF3B3Q15393 1217 aaKnown RBP33.13■■■□□ 2.89
VEGFA-226ENST00000611736 RTKN2Q8IZC4 609 aa33.12■■■□□ 2.89
VEGFA-226ENST00000611736 LINS1Q8NG48 757 aa33.12■■■□□ 2.89
VEGFA-226ENST00000611736 GRAPQ13588 217 aa33.11■■■□□ 2.89
VEGFA-226ENST00000611736 GCKRQ14397 625 aa33.11■■■□□ 2.89
VEGFA-226ENST00000611736 GRAPLQ8TC17 118 aaPredicted RBP33.11■■■□□ 2.89
VEGFA-226ENST00000611736 CDHR2Q9BYE9 1310 aa33.1■■■□□ 2.89
VEGFA-226ENST00000611736 PDE8AO60658 829 aa33.1■■■□□ 2.89
VEGFA-226ENST00000611736 FKBP4Q02790 459 aaKnown RBP eCLIP33.1■■■□□ 2.89
VEGFA-226ENST00000611736 GPBP1L1Q9HC44 474 aaPredicted RBP33.1■■■□□ 2.89
VEGFA-226ENST00000611736 CT47B1P0C2W7 299 aaPredicted RBP33.09■■■□□ 2.89
VEGFA-226ENST00000611736 CC2D2BQ6DHV5 1058 aa33.09■■■□□ 2.89
VEGFA-226ENST00000611736 UBE3BQ7Z3V4 1068 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms