RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 DDNO94850 711 aaPredicted RBP28.34■■■□□ 2.13
CBWD3-207ENST00000611426 HTRA3P83110 453 aa28.34■■■□□ 2.13
CBWD3-207ENST00000611426 PARP10Q53GL7 1025 aa28.34■■■□□ 2.13
CBWD3-207ENST00000611426 NTSR2O95665 410 aa28.33■■■□□ 2.13
CBWD3-207ENST00000611426 ZNF277Q9NRM2 450 aaPredicted RBP28.33■■■□□ 2.13
CBWD3-207ENST00000611426 AIMP1Q12904 312 aaKnown RBP28.32■■■□□ 2.12
CBWD3-207ENST00000611426 COPS6Q7L5N1 327 aa28.32■■■□□ 2.12
CBWD3-207ENST00000611426 HOXA10P31260 410 aaPredicted RBP28.31■■■□□ 2.12
CBWD3-207ENST00000611426 KRT24Q2M2I5 525 aa28.31■■■□□ 2.12
CBWD3-207ENST00000611426 SYNE4Q8N205 404 aa28.3■■■□□ 2.12
CBWD3-207ENST00000611426 XAGE3Q8WTP9 111 aa28.3■■■□□ 2.12
CBWD3-207ENST00000611426 RBM17Q96I25 401 aaKnown RBP28.3■■■□□ 2.12
CBWD3-207ENST00000611426 UTP14AQ9BVJ6 771 aaKnown RBP28.3■■■□□ 2.12
CBWD3-207ENST00000611426 RIC1Q4ADV7 1423 aa28.3■■■□□ 2.12
CBWD3-207ENST00000611426 DDX21Q9NR30 783 aaKnown RBP eCLIP28.29■■■□□ 2.12
CBWD3-207ENST00000611426 HSP90AB3PQ58FF7 597 aa28.28■■■□□ 2.12
CBWD3-207ENST00000611426 CC2D2BQ6DHV5 1058 aa28.28■■■□□ 2.12
CBWD3-207ENST00000611426 NLRP3Q96P20 1036 aa28.28■■■□□ 2.12
CBWD3-207ENST00000611426 IARSP41252 1262 aaKnown RBP28.26■■■□□ 2.12
CBWD3-207ENST00000611426 CFAP44Q96MT7 982 aa28.26■■■□□ 2.12
CBWD3-207ENST00000611426 CRAMP1Q96RY5 1269 aa28.26■■■□□ 2.12
CBWD3-207ENST00000611426 SLC10A5Q5PT55 438 aa28.25■■■□□ 2.11
CBWD3-207ENST00000611426 HDGFL1Q5TGJ6 251 aa28.25■■■□□ 2.11
CBWD3-207ENST00000611426 C3orf67Q6ZVT6 689 aa28.25■■■□□ 2.11
CBWD3-207ENST00000611426 KLRG1Q96E93 195 aa28.25■■■□□ 2.11
CBWD3-207ENST00000611426 PSMD1Q99460 953 aa28.25■■■□□ 2.11
CBWD3-207ENST00000611426 CHPF2Q9P2E5 772 aa28.25■■■□□ 2.11
CBWD3-207ENST00000611426 IQCA1LA6NCM1 817 aa28.24■■■□□ 2.11
CBWD3-207ENST00000611426 TCERG1O14776 1098 aaKnown RBP28.24■■■□□ 2.11
CBWD3-207ENST00000611426 HOXB7P09629 217 aa28.24■■■□□ 2.11
CBWD3-207ENST00000611426 APAF1O14727 1248 aa28.23■■■□□ 2.11
CBWD3-207ENST00000611426 PPEF1O14829 653 aaPredicted RBP28.23■■■□□ 2.11
CBWD3-207ENST00000611426 TCIRG1Q13488 830 aa28.23■■■□□ 2.11
CBWD3-207ENST00000611426 GRIPAP1Q4V328 841 aa28.23■■■□□ 2.11
CBWD3-207ENST00000611426 NLRP10Q86W26 655 aa28.23■■■□□ 2.11
CBWD3-207ENST00000611426 L3MBTL3Q96JM7 780 aaPredicted RBP28.23■■■□□ 2.11
CBWD3-207ENST00000611426 RNF123Q5XPI4 1314 aa28.22■■■□□ 2.11
CBWD3-207ENST00000611426 ZNF541Q9H0D2 1346 aa28.22■■■□□ 2.11
CBWD3-207ENST00000611426 CHADLQ6NUI6 762 aa28.22■■■□□ 2.11
CBWD3-207ENST00000611426 JDP2Q8WYK2 163 aa28.22■■■□□ 2.11
CBWD3-207ENST00000611426 SNED1Q8TER0 1413 aa28.21■■■□□ 2.11
CBWD3-207ENST00000611426 ANKRD36CQ5JPF3 1778 aa28.21■■■□□ 2.11
CBWD3-207ENST00000611426 TMX4Q9H1E5 349 aaPredicted RBP28.21■■■□□ 2.11
CBWD3-207ENST00000611426 MBIPQ9NS73 344 aa28.21■■■□□ 2.11
CBWD3-207ENST00000611426 DBF4Q9UBU7 674 aaPredicted RBP28.21■■■□□ 2.11
CBWD3-207ENST00000611426 TRMT112Q9UI30 125 aaKnown RBP28.21■■■□□ 2.11
CBWD3-207ENST00000611426 FZD9O00144 591 aa28.2■■■□□ 2.1
CBWD3-207ENST00000611426 DUSP27Q5VZP5 1158 aa28.2■■■□□ 2.1
CBWD3-207ENST00000611426 POTEIP0CG38 1075 aa28.19■■■□□ 2.1
CBWD3-207ENST00000611426 POTEJP0CG39 1038 aa28.19■■■□□ 2.1
CBWD3-207ENST00000611426 TAF1DQ9H5J8 278 aaPredicted RBP28.19■■■□□ 2.1
CBWD3-207ENST00000611426 SCN4AP35499 1836 aa28.19■■■□□ 2.1
CBWD3-207ENST00000611426 CENPBP07199 599 aaPredicted RBP28.18■■■□□ 2.1
CBWD3-207ENST00000611426 HCLS1P14317 486 aaPredicted RBP28.18■■■□□ 2.1
CBWD3-207ENST00000611426 CALD1Q05682 793 aaKnown RBP28.18■■■□□ 2.1
CBWD3-207ENST00000611426 ANKRD13DQ6ZTN6 518 aa28.18■■■□□ 2.1
CBWD3-207ENST00000611426 PLBD2Q8NHP8 589 aa28.18■■■□□ 2.1
CBWD3-207ENST00000611426 ZNF853P0CG23 659 aa28.17■■■□□ 2.1
CBWD3-207ENST00000611426 HYPKQ9NX55 129 aa28.17■■■□□ 2.1
CBWD3-207ENST00000611426 CCDC184Q52MB2 194 aa28.16■■■□□ 2.1
CBWD3-207ENST00000611426 SLC51AQ86UW1 340 aa28.16■■■□□ 2.1
CBWD3-207ENST00000611426 JMYQ8N9B5 988 aa28.16■■■□□ 2.1
CBWD3-207ENST00000611426 MRS2Q9HD23 443 aa28.16■■■□□ 2.1
CBWD3-207ENST00000611426 IFT57Q9NWB7 429 aa28.16■■■□□ 2.1
CBWD3-207ENST00000611426 HACL1Q9UJ83 578 aa28.16■■■□□ 2.1
CBWD3-207ENST00000611426 SH3TC1Q8TE82 1336 aa28.16■■■□□ 2.1
CBWD3-207ENST00000611426 EIF6P56537 245 aaKnown RBP28.15■■■□□ 2.1
CBWD3-207ENST00000611426 GNAI1P63096 354 aa28.15■■■□□ 2.1
CBWD3-207ENST00000611426 LDHDQ86WU2 507 aa28.15■■■□□ 2.1
CBWD3-207ENST00000611426 GPC2Q8N158 579 aa28.15■■■□□ 2.1
CBWD3-207ENST00000611426 LARGE2Q8N3Y3 721 aa28.15■■■□□ 2.1
CBWD3-207ENST00000611426 ATP6V0A2Q9Y487 856 aa28.15■■■□□ 2.1
CBWD3-207ENST00000611426 ABCC4O15439 1325 aa28.15■■■□□ 2.1
CBWD3-207ENST00000611426 ZNF428Q96B54 188 aa28.14■■■□□ 2.1
CBWD3-207ENST00000611426 BBOX1O75936 387 aa28.13■■■□□ 2.09
CBWD3-207ENST00000611426 EAPPQ56P03 285 aaPredicted RBP28.13■■■□□ 2.09
CBWD3-207ENST00000611426 YTHDC1Q96MU7 727 aaKnown RBP28.13■■■□□ 2.09
CBWD3-207ENST00000611426 PCNTO95613 3336 aa28.13■■■□□ 2.09
CBWD3-207ENST00000611426 EPHX2P34913 555 aa28.12■■■□□ 2.09
CBWD3-207ENST00000611426 IFFO2Q5TF58 517 aa28.12■■■□□ 2.09
CBWD3-207ENST00000611426 DDX46Q7L014 1031 aaKnown RBP28.12■■■□□ 2.09
CBWD3-207ENST00000611426 ELL2O00472 640 aaPredicted RBP28.11■■■□□ 2.09
CBWD3-207ENST00000611426 CLEC11AQ9Y240 323 aa28.11■■■□□ 2.09
CBWD3-207ENST00000611426 GJA3Q9Y6H8 435 aa28.11■■■□□ 2.09
CBWD3-207ENST00000611426 LAMB2P55268 1798 aa28.11■■■□□ 2.09
CBWD3-207ENST00000611426 ATP5J2-PTCD1G3V325 749 aa28.11■■■□□ 2.09
CBWD3-207ENST00000611426 ISCA1Q9BUE6 129 aa28.11■■■□□ 2.09
CBWD3-207ENST00000611426 COL4A5P29400 1685 aa28.1■■■□□ 2.09
CBWD3-207ENST00000611426 PNMA8AQ86V59 439 aaPredicted RBP28.1■■■□□ 2.09
CBWD3-207ENST00000611426 SP8Q8IXZ3 490 aa28.1■■■□□ 2.09
CBWD3-207ENST00000611426 PPIP5K2O43314 1243 aa28.09■■■□□ 2.09
CBWD3-207ENST00000611426 NIM1KQ8IY84 436 aa28.09■■■□□ 2.09
CBWD3-207ENST00000611426 GRAPQ13588 217 aa28.08■■■□□ 2.09
CBWD3-207ENST00000611426 SUPT20HQ8NEM7 779 aa28.08■■■□□ 2.09
CBWD3-207ENST00000611426 GRAPLQ8TC17 118 aaPredicted RBP28.08■■■□□ 2.09
CBWD3-207ENST00000611426 FAM89AQ96GI7 184 aa28.08■■■□□ 2.09
CBWD3-207ENST00000611426 VPS33BQ9H267 617 aa28.08■■■□□ 2.09
CBWD3-207ENST00000611426 CREBZFQ9NS37 354 aa28.08■■■□□ 2.09
CBWD3-207ENST00000611426 AOC3Q16853 763 aa28.07■■■□□ 2.08
CBWD3-207ENST00000611426 DPP8Q6V1X1 898 aaPredicted RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms