RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 SPATA31A1Q5TZJ5 1347 aa19.3■□□□□ 0.68
RTN1-209ENST00000611068 DDB1Q16531 1140 aa19.3■□□□□ 0.68
RTN1-209ENST00000611068 ZBTB3Q9H5J0 574 aa19.3■□□□□ 0.68
RTN1-209ENST00000611068 ATG3Q9NT62 314 aa19.3■□□□□ 0.68
RTN1-209ENST00000611068 CACNA1FO60840 1977 aa19.3■□□□□ 0.68
RTN1-209ENST00000611068 LRP10Q7Z4F1 713 aa19.29■□□□□ 0.68
RTN1-209ENST00000611068 PLEKHM2Q8IWE5 1019 aa19.29■□□□□ 0.68
RTN1-209ENST00000611068 DNAJC10Q8IXB1 793 aa19.29■□□□□ 0.68
RTN1-209ENST00000611068 MRC1P22897 1456 aa19.29■□□□□ 0.68
RTN1-209ENST00000611068 SHANK3Q9BYB0 1731 aa19.29■□□□□ 0.68
RTN1-209ENST00000611068 SURF6O75683 361 aaKnown RBP19.28■□□□□ 0.68
RTN1-209ENST00000611068 FAM182BQ5T319 152 aa19.28■□□□□ 0.68
RTN1-209ENST00000611068 CERS3Q8IU89 383 aa19.27■□□□□ 0.68
RTN1-209ENST00000611068 PA2G4Q9UQ80 394 aaKnown RBP19.27■□□□□ 0.68
RTN1-209ENST00000611068 SSFA2P28290 1259 aa19.27■□□□□ 0.68
RTN1-209ENST00000611068 KLHL40Q2TBA0 621 aa19.27■□□□□ 0.68
RTN1-209ENST00000611068 SUCLG2Q96I99 432 aa19.27■□□□□ 0.68
RTN1-209ENST00000611068 IBTKQ9P2D0 1353 aaPredicted RBP19.27■□□□□ 0.67
RTN1-209ENST00000611068 ZNF771Q7L3S4 317 aaPredicted RBP19.26■□□□□ 0.67
RTN1-209ENST00000611068 LINS1Q8NG48 757 aa19.26■□□□□ 0.67
RTN1-209ENST00000611068 GSPT1P15170 499 aaKnown RBP19.26■□□□□ 0.67
RTN1-209ENST00000611068 MCM5P33992 734 aa19.26■□□□□ 0.67
RTN1-209ENST00000611068 NEXNQ0ZGT2 675 aa19.26■□□□□ 0.67
RTN1-209ENST00000611068 MARCH10Q8NA82 808 aaPredicted RBP19.26■□□□□ 0.67
RTN1-209ENST00000611068 KCNJ4P48050 445 aa19.25■□□□□ 0.67
RTN1-209ENST00000611068 ZNF445P59923 1031 aa19.25■□□□□ 0.67
RTN1-209ENST00000611068 KLHDC4Q8TBB5 520 aa19.25■□□□□ 0.67
RTN1-209ENST00000611068 SECISBP2LQ93073 1101 aaKnown RBP19.25■□□□□ 0.67
RTN1-209ENST00000611068 COL22A1Q8NFW1 1626 aaPredicted RBP19.25■□□□□ 0.67
RTN1-209ENST00000611068 NEURL1BA8MQ27 555 aa19.25■□□□□ 0.67
RTN1-209ENST00000611068 GRM8O00222 908 aa19.25■□□□□ 0.67
RTN1-209ENST00000611068 CERKQ8TCT0 537 aa19.25■□□□□ 0.67
RTN1-209ENST00000611068 SLC4A9Q96Q91 983 aa19.25■□□□□ 0.67
RTN1-209ENST00000611068 CIZ1Q9ULV3 898 aaPredicted RBP19.25■□□□□ 0.67
RTN1-209ENST00000611068 DISP2A7MBM2 1401 aa19.25■□□□□ 0.67
RTN1-209ENST00000611068 KCNQ2O43526 872 aa19.24■□□□□ 0.67
RTN1-209ENST00000611068 CAVIN1Q6NZI2 390 aaKnown RBP19.24■□□□□ 0.67
RTN1-209ENST00000611068 METTL22Q9BUU2 404 aaPredicted RBP19.24■□□□□ 0.67
RTN1-209ENST00000611068 BICC1Q9H694 974 aaKnown RBP19.24■□□□□ 0.67
RTN1-209ENST00000611068 TOGARAM1Q9Y4F4 1720 aa19.24■□□□□ 0.67
RTN1-209ENST00000611068 ZSCAN23Q3MJ62 389 aa19.24■□□□□ 0.67
RTN1-209ENST00000611068 NUTM1Q86Y26 1132 aa19.24■□□□□ 0.67
RTN1-209ENST00000611068 SPATA31A5Q5VU36 1347 aa19.24■□□□□ 0.67
RTN1-209ENST00000611068 SPATA31A7Q8IWB4 1347 aa19.24■□□□□ 0.67
RTN1-209ENST00000611068 PTMSP20962 102 aa19.23■□□□□ 0.67
RTN1-209ENST00000611068 U2AF2P26368 475 aaKnown RBP eCLIP19.23■□□□□ 0.67
RTN1-209ENST00000611068 HSPA1LP34931 641 aa19.23■□□□□ 0.67
RTN1-209ENST00000611068 UBE3BQ7Z3V4 1068 aa19.23■□□□□ 0.67
RTN1-209ENST00000611068 KAZALD1Q96I82 304 aa19.23■□□□□ 0.67
RTN1-209ENST00000611068 LRRCC1Q9C099 1032 aa19.23■□□□□ 0.67
RTN1-209ENST00000611068 SIL1Q9H173 461 aa19.23■□□□□ 0.67
RTN1-209ENST00000611068 PLCH1Q4KWH8 1693 aa19.23■□□□□ 0.67
RTN1-209ENST00000611068 KCNQ4P56696 695 aa19.23■□□□□ 0.67
RTN1-209ENST00000611068 OS9Q13438 667 aaPredicted RBP19.23■□□□□ 0.67
RTN1-209ENST00000611068 EPHA10Q5JZY3 1008 aa19.23■□□□□ 0.67
RTN1-209ENST00000611068 PXDNLA1KZ92 1463 aa19.23■□□□□ 0.67
RTN1-209ENST00000611068 GCKRQ14397 625 aa19.22■□□□□ 0.67
RTN1-209ENST00000611068 KCPQ6ZWJ8 1503 aa19.22■□□□□ 0.67
RTN1-209ENST00000611068 ALDH1L1O75891 902 aa19.22■□□□□ 0.67
RTN1-209ENST00000611068 UNC5CLQ8IV45 518 aa19.22■□□□□ 0.67
RTN1-209ENST00000611068 SSH3Q8TE77 659 aa19.22■□□□□ 0.67
RTN1-209ENST00000611068 TEX2Q8IWB9 1127 aa19.21■□□□□ 0.67
RTN1-209ENST00000611068 CCDC39Q9UFE4 941 aa19.21■□□□□ 0.67
RTN1-209ENST00000611068 A0A087WZG4 1122 aa19.21■□□□□ 0.66
RTN1-209ENST00000611068 BMP2KLQ5H9B9 411 aa19.21■□□□□ 0.66
RTN1-209ENST00000611068 MEX3CQ5U5Q3 659 aaKnown RBP19.21■□□□□ 0.66
RTN1-209ENST00000611068 PTF1AQ7RTS3 328 aa19.21■□□□□ 0.66
RTN1-209ENST00000611068 BCL2L12Q9HB09 334 aa19.21■□□□□ 0.66
RTN1-209ENST00000611068 MAP4K4O95819 1239 aaPredicted RBP19.2■□□□□ 0.66
RTN1-209ENST00000611068 GTF2F1P35269 517 aaKnown RBP eCLIP19.2■□□□□ 0.66
RTN1-209ENST00000611068 EP400Q96L91 3159 aa19.2■□□□□ 0.66
RTN1-209ENST00000611068 PLEKHG2Q9H7P9 1386 aa19.2■□□□□ 0.66
RTN1-209ENST00000611068 CD2BP2O95400 341 aaKnown RBP19.2■□□□□ 0.66
RTN1-209ENST00000611068 PDCL2Q8N4E4 241 aa19.2■□□□□ 0.66
RTN1-209ENST00000611068 PLBD2Q8NHP8 589 aa19.2■□□□□ 0.66
RTN1-209ENST00000611068 USP21Q9UK80 565 aa19.2■□□□□ 0.66
RTN1-209ENST00000611068 KIAA2012Q0VF49 1180 aa19.19■□□□□ 0.66
RTN1-209ENST00000611068 TTC22Q5TAA0 569 aa19.19■□□□□ 0.66
RTN1-209ENST00000611068 TBC1D9Q6ZT07 1266 aa19.19■□□□□ 0.66
RTN1-209ENST00000611068 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.19■□□□□ 0.66
RTN1-209ENST00000611068 BAG4O95429 457 aaKnown RBP19.19■□□□□ 0.66
RTN1-209ENST00000611068 POLA2Q14181 598 aa19.19■□□□□ 0.66
RTN1-209ENST00000611068 MPNDQ8N594 471 aa19.19■□□□□ 0.66
RTN1-209ENST00000611068 GLI3P10071 1580 aa19.18■□□□□ 0.66
RTN1-209ENST00000611068 JCADQ9P266 1359 aa19.18■□□□□ 0.66
RTN1-209ENST00000611068 GOLGA6L22H0YM25 854 aa19.18■□□□□ 0.66
RTN1-209ENST00000611068 PDE1AP54750 535 aa19.18■□□□□ 0.66
RTN1-209ENST00000611068 IRX3P78415 501 aaPredicted RBP19.18■□□□□ 0.66
RTN1-209ENST00000611068 RGS22Q8NE09 1264 aa19.18■□□□□ 0.66
RTN1-209ENST00000611068 SNX21Q969T3 373 aa19.18■□□□□ 0.66
RTN1-209ENST00000611068 CHMP3Q9Y3E7 222 aa19.18■□□□□ 0.66
RTN1-209ENST00000611068 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.18■□□□□ 0.66
RTN1-209ENST00000611068 CHRM1P11229 460 aaPredicted RBP19.18■□□□□ 0.66
RTN1-209ENST00000611068 SDSP20132 328 aa19.18■□□□□ 0.66
RTN1-209ENST00000611068 PRIMPOLQ96LW4 560 aa19.18■□□□□ 0.66
RTN1-209ENST00000611068 KIF3AQ9Y496 699 aa19.18■□□□□ 0.66
RTN1-209ENST00000611068 BCL9O00512 1426 aa19.17■□□□□ 0.66
RTN1-209ENST00000611068 RBM25P49756 843 aaKnown RBP19.17■□□□□ 0.66
RTN1-209ENST00000611068 RHPN1Q8TCX5 695 aa19.17■□□□□ 0.66
RTN1-209ENST00000611068 CCDC85AQ96PX6 553 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms