RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
SNX20-205ENST00000610485 TOMM70O94826 608 aa16.72■□□□□ 0.27
SNX20-205ENST00000610485 HOXA10P31260 410 aaPredicted RBP16.72■□□□□ 0.27
SNX20-205ENST00000610485 TCIRG1Q13488 830 aa16.72■□□□□ 0.27
SNX20-205ENST00000610485 SLC10A5Q5PT55 438 aa16.72■□□□□ 0.27
SNX20-205ENST00000610485 NLRP10Q86W26 655 aa16.72■□□□□ 0.27
SNX20-205ENST00000610485 PLBD2Q8NHP8 589 aa16.72■□□□□ 0.27
SNX20-205ENST00000610485 UTP14AQ9BVJ6 771 aaKnown RBP16.72■□□□□ 0.27
SNX20-205ENST00000610485 HYPKQ9NX55 129 aa16.72■□□□□ 0.27
SNX20-205ENST00000610485 ANKRD36CQ5JPF3 1778 aa16.72■□□□□ 0.27
SNX20-205ENST00000610485 SNED1Q8TER0 1413 aa16.71■□□□□ 0.27
SNX20-205ENST00000610485 GLTPD2A6NH11 291 aa16.71■□□□□ 0.27
SNX20-205ENST00000610485 CACNA1SQ13698 1873 aa16.71■□□□□ 0.27
SNX20-205ENST00000610485 FKBP4Q02790 459 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNX20-205ENST00000610485 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
SNX20-205ENST00000610485 C3orf67Q6ZVT6 689 aa16.7■□□□□ 0.26
SNX20-205ENST00000610485 WWC1Q8IX03 1113 aa16.7■□□□□ 0.26
SNX20-205ENST00000610485 C8orf58Q8NAV2 365 aa16.7■□□□□ 0.26
SNX20-205ENST00000610485 RPGRQ92834 1020 aaKnown RBP16.7■□□□□ 0.26
SNX20-205ENST00000610485 HSPA6P17066 643 aa16.69■□□□□ 0.26
SNX20-205ENST00000610485 OLFM4Q6UX06 510 aa16.69■□□□□ 0.26
SNX20-205ENST00000610485 RTKN2Q8IZC4 609 aa16.69■□□□□ 0.26
SNX20-205ENST00000610485 NLRP3Q96P20 1036 aa16.69■□□□□ 0.26
SNX20-205ENST00000610485 CRAMP1Q96RY5 1269 aa16.69■□□□□ 0.26
SNX20-205ENST00000610485 RRAGCQ9HB90 399 aa16.69■□□□□ 0.26
SNX20-205ENST00000610485 ELL2O00472 640 aaPredicted RBP16.68■□□□□ 0.26
SNX20-205ENST00000610485 RBM46Q8TBY0 533 aaKnown RBP16.68■□□□□ 0.26
SNX20-205ENST00000610485 RBM17Q96I25 401 aaKnown RBP16.68■□□□□ 0.26
SNX20-205ENST00000610485 ISCA1Q9BUE6 129 aa16.68■□□□□ 0.26
SNX20-205ENST00000610485 IL16Q14005 1332 aa16.68■□□□□ 0.26
SNX20-205ENST00000610485 CC2D2BQ6DHV5 1058 aa16.67■□□□□ 0.26
SNX20-205ENST00000610485 C16orf71Q8IYS4 520 aaPredicted RBP16.67■□□□□ 0.26
SNX20-205ENST00000610485 TSR2Q969E8 191 aaKnown RBP16.67■□□□□ 0.26
SNX20-205ENST00000610485 CHMP4AQ9BY43 222 aa16.67■□□□□ 0.26
SNX20-205ENST00000610485 TRMT112Q9UI30 125 aaKnown RBP16.67■□□□□ 0.26
SNX20-205ENST00000610485 SH3TC1Q8TE82 1336 aa16.67■□□□□ 0.26
SNX20-205ENST00000610485 DPY19L2Q6NUT2 758 aa16.66■□□□□ 0.26
SNX20-205ENST00000610485 TSPYL6Q8N831 410 aa16.66■□□□□ 0.26
SNX20-205ENST00000610485 PSMD1Q99460 953 aa16.66■□□□□ 0.26
SNX20-205ENST00000610485 PHAXQ9H814 394 aaKnown RBP16.66■□□□□ 0.26
SNX20-205ENST00000610485 DICER1Q9UPY3 1922 aaKnown RBP16.66■□□□□ 0.26
SNX20-205ENST00000610485 WDR90Q96KV7 1748 aa16.65■□□□□ 0.26
SNX20-205ENST00000610485 PPEF1O14829 653 aaPredicted RBP16.65■□□□□ 0.26
SNX20-205ENST00000610485 HCLS1P14317 486 aaPredicted RBP16.65■□□□□ 0.26
SNX20-205ENST00000610485 VEGFAP15692 232 aaPredicted RBP16.65■□□□□ 0.26
SNX20-205ENST00000610485 GOLGA2Q08379 1002 aa16.65■□□□□ 0.26
SNX20-205ENST00000610485 TRIM28Q13263 835 aaKnown RBP16.65■□□□□ 0.26
SNX20-205ENST00000610485 GRIPAP1Q4V328 841 aa16.65■□□□□ 0.26
SNX20-205ENST00000610485 CCDC30Q5VVM6 783 aa16.65■□□□□ 0.26
SNX20-205ENST00000610485 SYNE4Q8N205 404 aa16.65■□□□□ 0.26
SNX20-205ENST00000610485 ZNF277Q9NRM2 450 aaPredicted RBP16.65■□□□□ 0.26
SNX20-205ENST00000610485 CCDC88AQ3V6T2 1871 aa16.65■□□□□ 0.26
SNX20-205ENST00000610485 POTECB2RU33 542 aa16.64■□□□□ 0.25
SNX20-205ENST00000610485 ATP5J2-PTCD1G3V325 749 aa16.64■□□□□ 0.25
SNX20-205ENST00000610485 FSTL1Q12841 308 aa16.64■□□□□ 0.25
SNX20-205ENST00000610485 ABCC4O15439 1325 aa16.64■□□□□ 0.25
SNX20-205ENST00000610485 IARSP41252 1262 aaKnown RBP16.63■□□□□ 0.25
SNX20-205ENST00000610485 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
SNX20-205ENST00000610485 SLC51AQ86UW1 340 aa16.62■□□□□ 0.25
SNX20-205ENST00000610485 WDR63Q8IWG1 891 aa16.62■□□□□ 0.25
SNX20-205ENST00000610485 ATP6V0A2Q9Y487 856 aa16.62■□□□□ 0.25
SNX20-205ENST00000610485 LAMB2P55268 1798 aa16.61■□□□□ 0.25
SNX20-205ENST00000610485 DDNO94850 711 aaPredicted RBP16.61■□□□□ 0.25
SNX20-205ENST00000610485 TWISTNBQ3B726 338 aaPredicted RBP16.61■□□□□ 0.25
SNX20-205ENST00000610485 SMC1BQ8NDV3 1235 aa16.61■□□□□ 0.25
SNX20-205ENST00000610485 FAM89AQ96GI7 184 aa16.61■□□□□ 0.25
SNX20-205ENST00000610485 FANCIQ9NVI1 1328 aa16.61■□□□□ 0.25
SNX20-205ENST00000610485 DDX60Q8IY21 1712 aaKnown RBP16.6■□□□□ 0.25
SNX20-205ENST00000610485 BBOX1O75936 387 aa16.6■□□□□ 0.25
SNX20-205ENST00000610485 DDX58O95786 925 aaKnown RBP16.6■□□□□ 0.25
SNX20-205ENST00000610485 APLP1P51693 650 aa16.6■□□□□ 0.25
SNX20-205ENST00000610485 GRAPQ13588 217 aa16.6■□□□□ 0.25
SNX20-205ENST00000610485 DDX46Q7L014 1031 aaKnown RBP16.6■□□□□ 0.25
SNX20-205ENST00000610485 FAM9BQ8IZU0 186 aa16.6■□□□□ 0.25
SNX20-205ENST00000610485 GRAPLQ8TC17 118 aaPredicted RBP16.6■□□□□ 0.25
SNX20-205ENST00000610485 ZNF428Q96B54 188 aa16.6■□□□□ 0.25
SNX20-205ENST00000610485 L3MBTL3Q96JM7 780 aaPredicted RBP16.6■□□□□ 0.25
SNX20-205ENST00000610485 ZNF541Q9H0D2 1346 aa16.6■□□□□ 0.25
SNX20-205ENST00000610485 COL4A5P29400 1685 aa16.59■□□□□ 0.25
SNX20-205ENST00000610485 FZD9O00144 591 aa16.59■□□□□ 0.25
SNX20-205ENST00000610485 TCERG1O14776 1098 aaKnown RBP16.59■□□□□ 0.25
SNX20-205ENST00000610485 SF3B3Q15393 1217 aaKnown RBP16.59■□□□□ 0.25
SNX20-205ENST00000610485 MYD88Q99836 296 aa16.59■□□□□ 0.25
SNX20-205ENST00000610485 METTL22Q9BUU2 404 aaPredicted RBP16.59■□□□□ 0.25
SNX20-205ENST00000610485 STK31Q9BXU1 1019 aa16.59■□□□□ 0.25
SNX20-205ENST00000610485 SALL2Q9Y467 1007 aaPredicted RBP16.59■□□□□ 0.25
SNX20-205ENST00000610485 SP8Q8IXZ3 490 aa16.58■□□□□ 0.24
SNX20-205ENST00000610485 ZBTB38Q8NAP3 1195 aaPredicted RBP16.58■□□□□ 0.24
SNX20-205ENST00000610485 CCDC191Q8NCU4 936 aa16.58■□□□□ 0.24
SNX20-205ENST00000610485 TMX4Q9H1E5 349 aaPredicted RBP16.58■□□□□ 0.24
SNX20-205ENST00000610485 IRS4O14654 1257 aaPredicted RBP16.57■□□□□ 0.24
SNX20-205ENST00000610485 KSR2Q6VAB6 950 aa16.57■□□□□ 0.24
SNX20-205ENST00000610485 TMC4Q7Z404 712 aa16.57■□□□□ 0.24
SNX20-205ENST00000610485 JDP2Q8WYK2 163 aa16.57■□□□□ 0.24
SNX20-205ENST00000610485 RTFDC1Q9BY42 306 aaPredicted RBP16.57■□□□□ 0.24
SNX20-205ENST00000610485 VPS33BQ9H267 617 aa16.57■□□□□ 0.24
SNX20-205ENST00000610485 CEP350Q5VT06 3117 aa16.56■□□□□ 0.24
SNX20-205ENST00000610485 IQCA1LA6NCM1 817 aa16.56■□□□□ 0.24
SNX20-205ENST00000610485 PCCAP05165 728 aaPredicted RBP16.56■□□□□ 0.24
SNX20-205ENST00000610485 RTL5Q5HYW3 569 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms