RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 CTU1Q7Z7A3 348 aaKnown RBP9.48□□□□□ -0.89
MUC1-221ENST00000610359 ZNF408Q9H9D4 720 aa9.48□□□□□ -0.89
MUC1-221ENST00000610359 RNF186Q9NXI6 227 aa9.48□□□□□ -0.89
MUC1-221ENST00000610359 PGAP2Q9UHJ9 254 aa9.48□□□□□ -0.89
MUC1-221ENST00000610359 A1BGP04217 495 aa9.47□□□□□ -0.89
MUC1-221ENST00000610359 HIRAP54198 1017 aaPredicted RBP9.47□□□□□ -0.89
MUC1-221ENST00000610359 KIF23Q02241 960 aaPredicted RBP9.47□□□□□ -0.89
MUC1-221ENST00000610359 NBPF5PQ86XG9 351 aaPredicted RBP9.47□□□□□ -0.89
MUC1-221ENST00000610359 ADARB2Q9NS39 739 aaKnown RBP9.47□□□□□ -0.89
MUC1-221ENST00000610359 GPRC5DQ9NZD1 345 aa9.47□□□□□ -0.89
MUC1-221ENST00000610359 HUNKP57058 714 aa9.46□□□□□ -0.9
MUC1-221ENST00000610359 ZNF496Q96IT1 587 aaPredicted RBP9.46□□□□□ -0.9
MUC1-221ENST00000610359 NUP98P52948 1817 aa9.46□□□□□ -0.9
MUC1-221ENST00000610359 HEG1Q9ULI3 1381 aa9.46□□□□□ -0.9
MUC1-221ENST00000610359 ALDH1B1P30837 517 aa9.45□□□□□ -0.9
MUC1-221ENST00000610359 IL13P35225 146 aa9.45□□□□□ -0.9
MUC1-221ENST00000610359 CDCA8Q53HL2 280 aa9.45□□□□□ -0.9
MUC1-221ENST00000610359 DZIP3Q86Y13 1208 aaKnown RBP9.45□□□□□ -0.9
MUC1-221ENST00000610359 LARGE2Q8N3Y3 721 aa9.45□□□□□ -0.9
MUC1-221ENST00000610359 PAPPA2Q9BXP8 1791 aa9.45□□□□□ -0.9
MUC1-221ENST00000610359 CENPFP49454 3210 aa9.44□□□□□ -0.9
MUC1-221ENST00000610359 PIP4K2AP48426 406 aaPredicted RBP9.44□□□□□ -0.9
MUC1-221ENST00000610359 GMPSP49915 693 aaPredicted RBP9.44□□□□□ -0.9
MUC1-221ENST00000610359 RGMBQ6NW40 437 aa9.44□□□□□ -0.9
MUC1-221ENST00000610359 CDC37L1Q7L3B6 337 aa9.44□□□□□ -0.9
MUC1-221ENST00000610359 TRPM4Q8TD43 1214 aa9.44□□□□□ -0.9
MUC1-221ENST00000610359 CSRNP1Q96S65 589 aa9.44□□□□□ -0.9
MUC1-221ENST00000610359 NPC1L1Q9UHC9 1359 aa9.44□□□□□ -0.9
MUC1-221ENST00000610359 RBBP6Q7Z6E9 1792 aaKnown RBP9.44□□□□□ -0.9
MUC1-221ENST00000610359 HTTP42858 3142 aa9.43□□□□□ -0.9
MUC1-221ENST00000610359 A0A0C4DFX4 3053 aa9.43□□□□□ -0.9
MUC1-221ENST00000610359 SHTN1A0MZ66 631 aa9.43□□□□□ -0.9
MUC1-221ENST00000610359 FAM177BA6PVY3 158 aa9.43□□□□□ -0.9
MUC1-221ENST00000610359 CXCL9Q07325 125 aa9.43□□□□□ -0.9
MUC1-221ENST00000610359 MTHFSDQ2M296 383 aaKnown RBP9.43□□□□□ -0.9
MUC1-221ENST00000610359 CLEC4GQ6UXB4 293 aa9.43□□□□□ -0.9
MUC1-221ENST00000610359 TPTE2Q6XPS3 522 aa9.43□□□□□ -0.9
MUC1-221ENST00000610359 USP48Q86UV5 1035 aa9.43□□□□□ -0.9
MUC1-221ENST00000610359 TTC5Q8N0Z6 440 aa9.43□□□□□ -0.9
MUC1-221ENST00000610359 ZC3H15Q8WU90 426 aaKnown RBP9.43□□□□□ -0.9
MUC1-221ENST00000610359 TEX13AQ9BXU3 409 aaPredicted RBP9.43□□□□□ -0.9
MUC1-221ENST00000610359 BRCA2P51587 3418 aa9.43□□□□□ -0.9
MUC1-221ENST00000610359 ABCC12Q96J65 1359 aa9.42□□□□□ -0.9
MUC1-221ENST00000610359 AOC3Q16853 763 aa9.42□□□□□ -0.9
MUC1-221ENST00000610359 CRY2Q49AN0 593 aa9.42□□□□□ -0.9
MUC1-221ENST00000610359 CC2D2BQ6DHV5 1058 aa9.42□□□□□ -0.9
MUC1-221ENST00000610359 ZNF790Q6PG37 636 aa9.42□□□□□ -0.9
MUC1-221ENST00000610359 NIM1KQ8IY84 436 aa9.42□□□□□ -0.9
MUC1-221ENST00000610359 TAF1P21675 1872 aa9.41□□□□□ -0.9
MUC1-221ENST00000610359 DLL1O00548 723 aa9.41□□□□□ -0.9
MUC1-221ENST00000610359 KCNQ3O43525 872 aa9.41□□□□□ -0.9
MUC1-221ENST00000610359 SLC10A3P09131 477 aa9.41□□□□□ -0.9
MUC1-221ENST00000610359 ZNF157P51786 506 aaPredicted RBP9.41□□□□□ -0.9
MUC1-221ENST00000610359 PKN2Q16513 984 aaKnown RBP9.41□□□□□ -0.9
MUC1-221ENST00000610359 CCDC102AQ96A19 550 aa9.41□□□□□ -0.9
MUC1-221ENST00000610359 GBA2Q9HCG7 927 aaPredicted RBP9.41□□□□□ -0.9
MUC1-221ENST00000610359 NIP7Q9Y221 180 aaKnown RBP eCLIP9.41□□□□□ -0.9
MUC1-221ENST00000610359 USP16Q9Y5T5 823 aa9.41□□□□□ -0.9
MUC1-221ENST00000610359 COL6A3P12111 3177 aa9.4□□□□□ -0.9
MUC1-221ENST00000610359 PRAMEF22A3QJZ6 481 aa9.4□□□□□ -0.9
MUC1-221ENST00000610359 TCERG1O14776 1098 aaKnown RBP9.4□□□□□ -0.9
MUC1-221ENST00000610359 PPIP5K2O43314 1243 aa9.4□□□□□ -0.9
MUC1-221ENST00000610359 HMOX1P09601 288 aa9.4□□□□□ -0.9
MUC1-221ENST00000610359 ZNF296Q8WUU4 475 aaPredicted RBP9.4□□□□□ -0.9
MUC1-221ENST00000610359 LAMB2P55268 1798 aa9.4□□□□□ -0.91
MUC1-221ENST00000610359 RIC1Q4ADV7 1423 aa9.39□□□□□ -0.91
MUC1-221ENST00000610359 HOXA10P31260 410 aaPredicted RBP9.39□□□□□ -0.91
MUC1-221ENST00000610359 HLFQ16534 295 aa9.39□□□□□ -0.91
MUC1-221ENST00000610359 NPM2Q86SE8 214 aaKnown RBP9.39□□□□□ -0.91
MUC1-221ENST00000610359 NUTM1Q86Y26 1132 aa9.39□□□□□ -0.91
MUC1-221ENST00000610359 IL17REQ8NFR9 667 aa9.39□□□□□ -0.91
MUC1-221ENST00000610359 ZNRF3Q9ULT6 936 aa9.39□□□□□ -0.91
MUC1-221ENST00000610359 ZNF652Q9Y2D9 606 aa9.39□□□□□ -0.91
MUC1-221ENST00000610359 CDHR2Q9BYE9 1310 aa9.38□□□□□ -0.91
MUC1-221ENST00000610359 POTEFA5A3E0 1075 aa9.38□□□□□ -0.91
MUC1-221ENST00000610359 ADM5C9JUS6 153 aa9.38□□□□□ -0.91
MUC1-221ENST00000610359 TBC1D8O95759 1140 aa9.38□□□□□ -0.91
MUC1-221ENST00000610359 GRIPAP1Q4V328 841 aa9.38□□□□□ -0.91
MUC1-221ENST00000610359 FBXO46Q6PJ61 603 aaPredicted RBP9.38□□□□□ -0.91
MUC1-221ENST00000610359 C2orf69Q8N8R5 385 aa9.38□□□□□ -0.91
MUC1-221ENST00000610359 FMNL2Q96PY5 1086 aa9.38□□□□□ -0.91
MUC1-221ENST00000610359 CNOT7Q9UIV1 285 aaKnown RBP9.38□□□□□ -0.91
MUC1-221ENST00000610359 HDAC9Q9UKV0 1011 aa9.38□□□□□ -0.91
MUC1-221ENST00000610359 COLQQ9Y215 455 aaPredicted RBP9.38□□□□□ -0.91
MUC1-221ENST00000610359 KIF7Q2M1P5 1343 aa9.37□□□□□ -0.91
MUC1-221ENST00000610359 NBPF26B4DH59 902 aa9.37□□□□□ -0.91
MUC1-221ENST00000610359 PPEF1O14829 653 aaPredicted RBP9.37□□□□□ -0.91
MUC1-221ENST00000610359 RAD17O75943 681 aa9.37□□□□□ -0.91
MUC1-221ENST00000610359 EGFRP00533 1210 aa9.37□□□□□ -0.91
MUC1-221ENST00000610359 NBPF10Q6P3W6 841 aaKnown RBP9.37□□□□□ -0.91
MUC1-221ENST00000610359 C3orf67Q6ZVT6 689 aa9.37□□□□□ -0.91
MUC1-221ENST00000610359 SAMD7Q7Z3H4 446 aa9.37□□□□□ -0.91
MUC1-221ENST00000610359 KRT26Q7Z3Y9 468 aa9.37□□□□□ -0.91
MUC1-221ENST00000610359 RASAL3Q86YV0 1011 aa9.37□□□□□ -0.91
MUC1-221ENST00000610359 CRAMP1Q96RY5 1269 aa9.37□□□□□ -0.91
MUC1-221ENST00000610359 BCL2L13Q9BXK5 485 aa9.37□□□□□ -0.91
MUC1-221ENST00000610359 RANBP2P49792 3224 aaKnown RBP9.37□□□□□ -0.91
MUC1-221ENST00000610359 SCN9AQ15858 1988 aa9.36□□□□□ -0.91
MUC1-221ENST00000610359 YDJCA8MPS7 323 aa9.36□□□□□ -0.91
MUC1-221ENST00000610359 RGL2O15211 777 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms