RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 LRRC2Q9BYS8 371 aa16.56■□□□□ 0.24
PCDHB16-201ENST00000609684 MAP3K5Q99683 1374 aa16.56■□□□□ 0.24
PCDHB16-201ENST00000609684 SEC24BO95487 1268 aa16.56■□□□□ 0.24
PCDHB16-201ENST00000609684 NGLY1Q96IV0 654 aa16.56■□□□□ 0.24
PCDHB16-201ENST00000609684 PTPN14Q15678 1187 aa16.56■□□□□ 0.24
PCDHB16-201ENST00000609684 ZSCAN23Q3MJ62 389 aa16.56■□□□□ 0.24
PCDHB16-201ENST00000609684 CATIPQ7Z7H3 387 aa16.56■□□□□ 0.24
PCDHB16-201ENST00000609684 TXLNBQ8N3L3 684 aa16.56■□□□□ 0.24
PCDHB16-201ENST00000609684 PDCL3Q9H2J4 239 aa16.56■□□□□ 0.24
PCDHB16-201ENST00000609684 BIN1O00499 593 aa16.55■□□□□ 0.24
PCDHB16-201ENST00000609684 PLEKHM2Q8IWE5 1019 aa16.55■□□□□ 0.24
PCDHB16-201ENST00000609684 PHAXQ9H814 394 aaKnown RBP16.55■□□□□ 0.24
PCDHB16-201ENST00000609684 CWF19L2Q2TBE0 894 aaKnown RBP16.55■□□□□ 0.24
PCDHB16-201ENST00000609684 CRACR2BQ8N4Y2 399 aaPredicted RBP16.55■□□□□ 0.24
PCDHB16-201ENST00000609684 TMOD2Q9NZR1 351 aa16.55■□□□□ 0.24
PCDHB16-201ENST00000609684 METAP2P50579 478 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCDHB16-201ENST00000609684 MSH6P52701 1360 aa16.55■□□□□ 0.24
PCDHB16-201ENST00000609684 ERLIN1O75477 346 aa16.54■□□□□ 0.24
PCDHB16-201ENST00000609684 NLRP5P59047 1200 aa16.54■□□□□ 0.24
PCDHB16-201ENST00000609684 NFATC2IPQ8NCF5 419 aa16.54■□□□□ 0.24
PCDHB16-201ENST00000609684 CABLES1Q8TDN4 633 aa16.54■□□□□ 0.24
PCDHB16-201ENST00000609684 ADCY5O95622 1261 aa16.54■□□□□ 0.24
PCDHB16-201ENST00000609684 TOP1P11387 765 aaKnown RBP16.54■□□□□ 0.24
PCDHB16-201ENST00000609684 ZNF165P49910 485 aa16.54■□□□□ 0.24
PCDHB16-201ENST00000609684 MFSD6Q6ZSS7 791 aa16.54■□□□□ 0.24
PCDHB16-201ENST00000609684 DMRT2Q9Y5R5 561 aa16.54■□□□□ 0.24
PCDHB16-201ENST00000609684 KCNA6P17658 529 aa16.54■□□□□ 0.24
PCDHB16-201ENST00000609684 MCM5P33992 734 aa16.54■□□□□ 0.24
PCDHB16-201ENST00000609684 CCDC194A0A1B0GVG4 234 aa16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 ZBTB7BO15156 539 aaPredicted RBP16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 HOXC9P31274 260 aa16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 RPGRQ92834 1020 aaKnown RBP16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 ZMYM3Q14202 1370 aa16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 UQCRFS1P1P0C7P4 283 aa16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 HCLS1P14317 486 aaPredicted RBP16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 KIAA1328Q86T90 577 aa16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 UBXN4Q92575 508 aa16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 KLF18A0A0U1RQI7 1052 aa16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 KIF2AO00139 706 aaPredicted RBP16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 GCP02774 474 aa16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 STX1AQ16623 288 aa16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 GIMAP6Q6P9H5 292 aa16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 CNPY2Q9Y2B0 182 aa16.53■□□□□ 0.24
PCDHB16-201ENST00000609684 IL15P40933 162 aaPredicted RBP16.52■□□□□ 0.24
PCDHB16-201ENST00000609684 MCMDC2Q4G0Z9 681 aa16.52■□□□□ 0.24
PCDHB16-201ENST00000609684 CWC15Q9P013 229 aaKnown RBP16.52■□□□□ 0.24
PCDHB16-201ENST00000609684 NMIQ13287 307 aaPredicted RBP16.52■□□□□ 0.24
PCDHB16-201ENST00000609684 SLC26A6Q9BXS9 759 aa16.52■□□□□ 0.24
PCDHB16-201ENST00000609684 ZFYP08048 801 aaPredicted RBP16.52■□□□□ 0.23
PCDHB16-201ENST00000609684 PANK2Q9BZ23 570 aa16.52■□□□□ 0.23
PCDHB16-201ENST00000609684 ZSCAN16Q9H4T2 348 aaPredicted RBP16.52■□□□□ 0.23
PCDHB16-201ENST00000609684 IL13P35225 146 aa16.52■□□□□ 0.23
PCDHB16-201ENST00000609684 ATP7AQ04656 1500 aa16.51■□□□□ 0.23
PCDHB16-201ENST00000609684 SOS1Q07889 1333 aaPredicted RBP16.51■□□□□ 0.23
PCDHB16-201ENST00000609684 TTC41PQ6P2S7 1318 aa16.51■□□□□ 0.23
PCDHB16-201ENST00000609684 RDXP35241 583 aaKnown RBP16.51■□□□□ 0.23
PCDHB16-201ENST00000609684 G2E3Q7L622 706 aa16.51■□□□□ 0.23
PCDHB16-201ENST00000609684 ZSCAN12O43309 604 aa16.51■□□□□ 0.23
PCDHB16-201ENST00000609684 SEPT11Q9NVA2 429 aaKnown RBP16.51■□□□□ 0.23
PCDHB16-201ENST00000609684 TRPM2O94759 1503 aa16.51■□□□□ 0.23
PCDHB16-201ENST00000609684 SAMD9Q5K651 1589 aa16.51■□□□□ 0.23
PCDHB16-201ENST00000609684 CCDC96Q2M329 555 aa16.51■□□□□ 0.23
PCDHB16-201ENST00000609684 LRSAM1Q6UWE0 723 aa16.51■□□□□ 0.23
PCDHB16-201ENST00000609684 ZMYM4Q5VZL5 1548 aa16.51■□□□□ 0.23
PCDHB16-201ENST00000609684 CCDC66A2RUB6 948 aa16.51■□□□□ 0.23
PCDHB16-201ENST00000609684 TRIM35Q9UPQ4 493 aa16.51■□□□□ 0.23
PCDHB16-201ENST00000609684 PDCL2Q8N4E4 241 aa16.5■□□□□ 0.23
PCDHB16-201ENST00000609684 TSPY2A6NKD2 308 aa16.5■□□□□ 0.23
PCDHB16-201ENST00000609684 C6orf229H3BNL8 230 aa16.5■□□□□ 0.23
PCDHB16-201ENST00000609684 LEKR1Q6ZMV7 388 aa16.5■□□□□ 0.23
PCDHB16-201ENST00000609684 KIF18AQ8NI77 898 aa16.5■□□□□ 0.23
PCDHB16-201ENST00000609684 ABCA5Q8WWZ7 1642 aa16.5■□□□□ 0.23
PCDHB16-201ENST00000609684 CCDC152Q4G0S7 254 aa16.5■□□□□ 0.23
PCDHB16-201ENST00000609684 USP48Q86UV5 1035 aa16.5■□□□□ 0.23
PCDHB16-201ENST00000609684 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
PCDHB16-201ENST00000609684 HMGB2P26583 209 aaKnown RBP16.5■□□□□ 0.23
PCDHB16-201ENST00000609684 Q6ZUG5 572 aa16.49■□□□□ 0.23
PCDHB16-201ENST00000609684 ZNF397Q8NF99 534 aaPredicted RBP16.49■□□□□ 0.23
PCDHB16-201ENST00000609684 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
PCDHB16-201ENST00000609684 TRMT1Q9NXH9 659 aaKnown RBP16.49■□□□□ 0.23
PCDHB16-201ENST00000609684 IP6K1Q92551 441 aa16.49■□□□□ 0.23
PCDHB16-201ENST00000609684 C16orf45Q96MC5 204 aaPredicted RBP16.49■□□□□ 0.23
PCDHB16-201ENST00000609684 MAGI3Q5TCQ9 1506 aa16.49■□□□□ 0.23
PCDHB16-201ENST00000609684 H0YHG0 523 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 EIF3JO75822 258 aaKnown RBP16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 ERLIN2O94905 339 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 CHMLP26374 656 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 SLC4A8Q2Y0W8 1093 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 ISM2Q6H9L7 571 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 IQSEC3Q9UPP2 1182 aaPredicted RBP16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 PDE4BQ07343 736 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 TBX22Q9Y458 520 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 UVSSAQ2YD98 709 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 SLF2Q8IX21 1173 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 RAB34Q9BZG1 259 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 EDC4Q6P2E9 1401 aaKnown RBP16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 RNMTO43148 476 aaKnown RBP16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 F13A1P00488 732 aa16.48■□□□□ 0.23
PCDHB16-201ENST00000609684 LDHCP07864 332 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms