RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 TXLNAP40222 546 aa16.74■□□□□ 0.27
LINC02538-201ENST00000609107 NMIQ13287 307 aaPredicted RBP16.74■□□□□ 0.27
LINC02538-201ENST00000609107 SETBP1Q9Y6X0 1596 aa16.74■□□□□ 0.27
LINC02538-201ENST00000609107 GSPT1P15170 499 aaKnown RBP16.74■□□□□ 0.27
LINC02538-201ENST00000609107 VPS53Q5VIR6 699 aa16.74■□□□□ 0.27
LINC02538-201ENST00000609107 ABCA6Q8N139 1617 aa16.73■□□□□ 0.27
LINC02538-201ENST00000609107 NPHP3Q7Z494 1330 aa16.73■□□□□ 0.27
LINC02538-201ENST00000609107 ADCY5O95622 1261 aa16.73■□□□□ 0.27
LINC02538-201ENST00000609107 CHRNA2Q15822 529 aa16.73■□□□□ 0.27
LINC02538-201ENST00000609107 NUP133Q8WUM0 1156 aa16.73■□□□□ 0.27
LINC02538-201ENST00000609107 ADGRB3O60242 1522 aa16.73■□□□□ 0.27
LINC02538-201ENST00000609107 ANKRD18BA2A2Z9 1011 aa16.73■□□□□ 0.27
LINC02538-201ENST00000609107 ZNF771Q7L3S4 317 aaPredicted RBP16.73■□□□□ 0.27
LINC02538-201ENST00000609107 FILIP1Q7Z7B0 1213 aa16.73■□□□□ 0.27
LINC02538-201ENST00000609107 PNMA6EA0A0J9YXQ4 647 aa16.73■□□□□ 0.27
LINC02538-201ENST00000609107 CKAP2LQ8IYA6 745 aa16.73■□□□□ 0.27
LINC02538-201ENST00000609107 LRP2BPQ9P2M1 347 aa16.73■□□□□ 0.27
LINC02538-201ENST00000609107 PRIM1P49642 420 aaKnown RBP16.72■□□□□ 0.27
LINC02538-201ENST00000609107 DDX46Q7L014 1031 aaKnown RBP16.72■□□□□ 0.27
LINC02538-201ENST00000609107 NOL7Q9UMY1 257 aaKnown RBP16.72■□□□□ 0.27
LINC02538-201ENST00000609107 MCMDC2Q4G0Z9 681 aa16.72■□□□□ 0.27
LINC02538-201ENST00000609107 HS1BP3Q53T59 392 aa16.72■□□□□ 0.27
LINC02538-201ENST00000609107 CDK12Q9NYV4 1490 aaPredicted RBP16.72■□□□□ 0.27
LINC02538-201ENST00000609107 LMTK2Q8IWU2 1503 aa16.72■□□□□ 0.27
LINC02538-201ENST00000609107 JARID2Q92833 1246 aaPredicted RBP16.72■□□□□ 0.27
LINC02538-201ENST00000609107 HCLS1P14317 486 aaPredicted RBP16.72■□□□□ 0.27
LINC02538-201ENST00000609107 LTKP29376 864 aa16.72■□□□□ 0.27
LINC02538-201ENST00000609107 IL15P40933 162 aaPredicted RBP16.72■□□□□ 0.27
LINC02538-201ENST00000609107 CCT2P78371 535 aaKnown RBP16.71■□□□□ 0.27
LINC02538-201ENST00000609107 LMBR1LQ6UX01 489 aa16.71■□□□□ 0.27
LINC02538-201ENST00000609107 MAP3K12Q12852 859 aa16.71■□□□□ 0.27
LINC02538-201ENST00000609107 TEX35Q5T0J7 233 aa16.71■□□□□ 0.27
LINC02538-201ENST00000609107 CREB3L3Q68CJ9 461 aa16.71■□□□□ 0.27
LINC02538-201ENST00000609107 GLI2P10070 1586 aa16.71■□□□□ 0.27
LINC02538-201ENST00000609107 BRF1Q92994 677 aa16.71■□□□□ 0.27
LINC02538-201ENST00000609107 NAPBQ9H115 298 aa16.71■□□□□ 0.27
LINC02538-201ENST00000609107 TRMT112Q9UI30 125 aaKnown RBP16.71■□□□□ 0.27
LINC02538-201ENST00000609107 GOLGA8BA8MQT2 603 aa16.7■□□□□ 0.26
LINC02538-201ENST00000609107 CLSTN1O94985 981 aa16.7■□□□□ 0.26
LINC02538-201ENST00000609107 ZFYP08048 801 aaPredicted RBP16.7■□□□□ 0.26
LINC02538-201ENST00000609107 TTF1Q15361 905 aaPredicted RBP16.7■□□□□ 0.26
LINC02538-201ENST00000609107 TRIM34Q9BYJ4 488 aa16.7■□□□□ 0.26
LINC02538-201ENST00000609107 C19orf44Q9H6X5 657 aa16.7■□□□□ 0.26
LINC02538-201ENST00000609107 RAI14Q9P0K7 980 aa16.7■□□□□ 0.26
LINC02538-201ENST00000609107 GUCY1B3Q02153 619 aa16.7■□□□□ 0.26
LINC02538-201ENST00000609107 NFATC2IPQ8NCF5 419 aa16.7■□□□□ 0.26
LINC02538-201ENST00000609107 SGSM2O43147 1006 aa16.7■□□□□ 0.26
LINC02538-201ENST00000609107 ZCRB1Q8TBF4 217 aaKnown RBP16.7■□□□□ 0.26
LINC02538-201ENST00000609107 NOC3LQ8WTT2 800 aaKnown RBP16.7■□□□□ 0.26
LINC02538-201ENST00000609107 SMARCE1Q969G3 411 aa16.7■□□□□ 0.26
LINC02538-201ENST00000609107 DCAF5Q96JK2 942 aa16.7■□□□□ 0.26
LINC02538-201ENST00000609107 ABCA9Q8IUA7 1624 aa16.7■□□□□ 0.26
LINC02538-201ENST00000609107 CCDC171Q6TFL3 1326 aa16.7■□□□□ 0.26
LINC02538-201ENST00000609107 CCDC196A0A1B0GTZ2 297 aa16.69■□□□□ 0.26
LINC02538-201ENST00000609107 GIMAP6Q6P9H5 292 aa16.69■□□□□ 0.26
LINC02538-201ENST00000609107 LDHAL6AQ6ZMR3 332 aa16.69■□□□□ 0.26
LINC02538-201ENST00000609107 FSIP1Q8NA03 581 aa16.69■□□□□ 0.26
LINC02538-201ENST00000609107 PLEKHG1Q9ULL1 1385 aa16.69■□□□□ 0.26
LINC02538-201ENST00000609107 SLC5A1P13866 664 aa16.69■□□□□ 0.26
LINC02538-201ENST00000609107 RUFY3Q7L099 469 aa16.69■□□□□ 0.26
LINC02538-201ENST00000609107 STK11IPQ8N1F8 1099 aa16.69■□□□□ 0.26
LINC02538-201ENST00000609107 TCEANC2Q96MN5 208 aa16.69■□□□□ 0.26
LINC02538-201ENST00000609107 CEP131Q9UPN4 1083 aa16.69■□□□□ 0.26
LINC02538-201ENST00000609107 BICC1Q9H694 974 aaKnown RBP16.69■□□□□ 0.26
LINC02538-201ENST00000609107 LGR6Q9HBX8 967 aa16.69■□□□□ 0.26
LINC02538-201ENST00000609107 EIF4A1P60842 406 aaKnown RBP16.68■□□□□ 0.26
LINC02538-201ENST00000609107 DNM1Q05193 864 aaKnown RBP16.68■□□□□ 0.26
LINC02538-201ENST00000609107 SNRKQ9NRH2 765 aa16.68■□□□□ 0.26
LINC02538-201ENST00000609107 ZNF165P49910 485 aa16.68■□□□□ 0.26
LINC02538-201ENST00000609107 USP16Q9Y5T5 823 aa16.68■□□□□ 0.26
LINC02538-201ENST00000609107 KIF2AO00139 706 aaPredicted RBP16.68■□□□□ 0.26
LINC02538-201ENST00000609107 STX1AQ16623 288 aa16.68■□□□□ 0.26
LINC02538-201ENST00000609107 NCOA7Q8NI08 942 aa16.68■□□□□ 0.26
LINC02538-201ENST00000609107 NEMFO60524 1076 aa16.67■□□□□ 0.26
LINC02538-201ENST00000609107 SSH3Q8TE77 659 aa16.67■□□□□ 0.26
LINC02538-201ENST00000609107 CLIP2Q9UDT6 1046 aa16.67■□□□□ 0.26
LINC02538-201ENST00000609107 ZNF652Q9Y2D9 606 aa16.67■□□□□ 0.26
LINC02538-201ENST00000609107 ZKSCAN5Q9Y2L8 839 aa16.67■□□□□ 0.26
LINC02538-201ENST00000609107 SSH2Q76I76 1423 aa16.67■□□□□ 0.26
LINC02538-201ENST00000609107 RAD21O60216 631 aa16.67■□□□□ 0.26
LINC02538-201ENST00000609107 SYT1P21579 422 aa16.67■□□□□ 0.26
LINC02538-201ENST00000609107 ZNF445P59923 1031 aa16.67■□□□□ 0.26
LINC02538-201ENST00000609107 IL17REQ8NFR9 667 aa16.67■□□□□ 0.26
LINC02538-201ENST00000609107 PTCH1Q13635 1447 aa16.67■□□□□ 0.26
LINC02538-201ENST00000609107 NBPF7P0C2Y1 421 aaPredicted RBP16.67■□□□□ 0.26
LINC02538-201ENST00000609107 NBPF6Q5VWK0 638 aa16.67■□□□□ 0.26
LINC02538-201ENST00000609107 NBPF4Q96M43 638 aa16.67■□□□□ 0.26
LINC02538-201ENST00000609107 USP44Q9H0E7 712 aa16.67■□□□□ 0.26
LINC02538-201ENST00000609107 ORC3Q9UBD5 711 aaPredicted RBP16.67■□□□□ 0.26
LINC02538-201ENST00000609107 PPFIBP1Q86W92 1011 aa16.66■□□□□ 0.26
LINC02538-201ENST00000609107 SNX14Q9Y5W7 946 aa16.66■□□□□ 0.26
LINC02538-201ENST00000609107 Q6ZUG5 572 aa16.66■□□□□ 0.26
LINC02538-201ENST00000609107 CCAR1Q8IX12 1150 aaKnown RBP16.66■□□□□ 0.26
LINC02538-201ENST00000609107 FAM200AQ8TCP9 573 aa16.66■□□□□ 0.26
LINC02538-201ENST00000609107 ABCF2Q9UG63 623 aa16.66■□□□□ 0.26
LINC02538-201ENST00000609107 GPTP24298 496 aa16.66■□□□□ 0.26
LINC02538-201ENST00000609107 ZNF790Q6PG37 636 aa16.66■□□□□ 0.26
LINC02538-201ENST00000609107 RNF41Q9H4P4 317 aaPredicted RBP16.66■□□□□ 0.26
LINC02538-201ENST00000609107 MTMR7Q9Y216 660 aa16.66■□□□□ 0.26
LINC02538-201ENST00000609107 USP6P35125 1406 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms