RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 ANO8Q9HCE9 1232 aaPredicted RBP14.51□□□□□ -0.09
CTCFL-221ENST00000608903 CWC25Q9NXE8 425 aaPredicted RBP14.51□□□□□ -0.09
CTCFL-221ENST00000608903 SCN7AQ01118 1682 aa14.51□□□□□ -0.09
CTCFL-221ENST00000608903 RTL5Q5HYW3 569 aaPredicted RBP14.5□□□□□ -0.09
CTCFL-221ENST00000608903 TRAPPC3LQ5T215 181 aa14.5□□□□□ -0.09
CTCFL-221ENST00000608903 NPM2Q86SE8 214 aaKnown RBP14.5□□□□□ -0.09
CTCFL-221ENST00000608903 SKAP1Q86WV1 359 aa14.5□□□□□ -0.09
CTCFL-221ENST00000608903 PNMA6EA0A0J9YXQ4 647 aa14.5□□□□□ -0.09
CTCFL-221ENST00000608903 HDAC1Q13547 482 aaPredicted RBP14.5□□□□□ -0.09
CTCFL-221ENST00000608903 UBE3BQ7Z3V4 1068 aa14.5□□□□□ -0.09
CTCFL-221ENST00000608903 SUSD4Q5VX71 490 aa14.49□□□□□ -0.09
CTCFL-221ENST00000608903 TBC1D9BQ66K14 1250 aa14.49□□□□□ -0.09
CTCFL-221ENST00000608903 USP42Q9H9J4 1324 aaKnown RBP14.49□□□□□ -0.09
CTCFL-221ENST00000608903 ATP8B2P98198 1209 aa14.48□□□□□ -0.09
CTCFL-221ENST00000608903 HSP90AB3PQ58FF7 597 aa14.48□□□□□ -0.09
CTCFL-221ENST00000608903 CLEC4GQ6UXB4 293 aa14.48□□□□□ -0.09
CTCFL-221ENST00000608903 COL23A1Q86Y22 540 aaPredicted RBP14.48□□□□□ -0.09
CTCFL-221ENST00000608903 RPAP2Q8IXW5 612 aaPredicted RBP14.48□□□□□ -0.09
CTCFL-221ENST00000608903 FAM89AQ96GI7 184 aa14.48□□□□□ -0.09
CTCFL-221ENST00000608903 BICC1Q9H694 974 aaKnown RBP14.48□□□□□ -0.09
CTCFL-221ENST00000608903 ADRA2BP18089 450 aa14.47□□□□□ -0.09
CTCFL-221ENST00000608903 SSFA2P28290 1259 aa14.47□□□□□ -0.09
CTCFL-221ENST00000608903 RFC4P35249 363 aa14.47□□□□□ -0.09
CTCFL-221ENST00000608903 FOXO4P98177 505 aa14.47□□□□□ -0.09
CTCFL-221ENST00000608903 RWDD1Q9H446 243 aaPredicted RBP14.47□□□□□ -0.09
CTCFL-221ENST00000608903 NIP7Q9Y221 180 aaKnown RBP eCLIP14.47□□□□□ -0.09
CTCFL-221ENST00000608903 PCCAP05165 728 aaPredicted RBP14.47□□□□□ -0.09
CTCFL-221ENST00000608903 BAG6P46379 1132 aa14.47□□□□□ -0.09
CTCFL-221ENST00000608903 PPP1R42Q7Z4L9 355 aa14.47□□□□□ -0.09
CTCFL-221ENST00000608903 FAM177BA6PVY3 158 aa14.46□□□□□ -0.09
CTCFL-221ENST00000608903 ZPR1O75312 459 aa14.46□□□□□ -0.09
CTCFL-221ENST00000608903 SF3B2Q13435 895 aaKnown RBP14.46□□□□□ -0.09
CTCFL-221ENST00000608903 BICDL1Q6ZP65 573 aa14.46□□□□□ -0.09
CTCFL-221ENST00000608903 CENPQQ7L2Z9 268 aaPredicted RBP14.46□□□□□ -0.09
CTCFL-221ENST00000608903 TFCP2L1Q9NZI6 479 aa14.46□□□□□ -0.09
CTCFL-221ENST00000608903 PNPLA7Q6ZV29 1317 aa14.46□□□□□ -0.1
CTCFL-221ENST00000608903 GYS1P13807 737 aa14.45□□□□□ -0.1
CTCFL-221ENST00000608903 POLA2Q14181 598 aa14.45□□□□□ -0.1
CTCFL-221ENST00000608903 ZBTB38Q8NAP3 1195 aaPredicted RBP14.45□□□□□ -0.1
CTCFL-221ENST00000608903 RGL2O15211 777 aa14.45□□□□□ -0.1
CTCFL-221ENST00000608903 NTSR2O95665 410 aa14.45□□□□□ -0.1
CTCFL-221ENST00000608903 MTX1Q13505 466 aa14.45□□□□□ -0.1
CTCFL-221ENST00000608903 SMC5Q8IY18 1101 aa14.45□□□□□ -0.1
CTCFL-221ENST00000608903 SSH3Q8TE77 659 aa14.45□□□□□ -0.1
CTCFL-221ENST00000608903 UPF1Q92900 1129 aaKnown RBP eCLIP14.45□□□□□ -0.1
CTCFL-221ENST00000608903 TRMT112Q9UI30 125 aaKnown RBP14.44□□□□□ -0.1
CTCFL-221ENST00000608903 ZNF652Q9Y2D9 606 aa14.44□□□□□ -0.1
CTCFL-221ENST00000608903 NFIXQ14938 502 aa14.44□□□□□ -0.1
CTCFL-221ENST00000608903 SLC15A2Q16348 729 aa14.44□□□□□ -0.1
CTCFL-221ENST00000608903 RABL6Q3YEC7 729 aaPredicted RBP14.44□□□□□ -0.1
CTCFL-221ENST00000608903 CCDC125Q86Z20 511 aa14.44□□□□□ -0.1
CTCFL-221ENST00000608903 DCTPP1Q9H773 170 aa14.44□□□□□ -0.1
CTCFL-221ENST00000608903 COL24A1Q17RW2 1714 aa14.43□□□□□ -0.1
CTCFL-221ENST00000608903 NUTM1Q86Y26 1132 aa14.43□□□□□ -0.1
CTCFL-221ENST00000608903 UTP14AQ9BVJ6 771 aaKnown RBP14.43□□□□□ -0.1
CTCFL-221ENST00000608903 PDGFDQ9GZP0 370 aaPredicted RBP14.43□□□□□ -0.1
CTCFL-221ENST00000608903 SRGAP3O43295 1099 aa14.42□□□□□ -0.1
CTCFL-221ENST00000608903 PARP10Q53GL7 1025 aa14.42□□□□□ -0.1
CTCFL-221ENST00000608903 ILDR2Q71H61 639 aa14.42□□□□□ -0.1
CTCFL-221ENST00000608903 PLA2G12BQ9BX93 195 aa14.42□□□□□ -0.1
CTCFL-221ENST00000608903 CDHR2Q9BYE9 1310 aa14.42□□□□□ -0.1
CTCFL-221ENST00000608903 TM4SF1P30408 202 aa14.42□□□□□ -0.1
CTCFL-221ENST00000608903 RFX5P48382 616 aaPredicted RBP14.42□□□□□ -0.1
CTCFL-221ENST00000608903 LMBR1LQ6UX01 489 aa14.42□□□□□ -0.1
CTCFL-221ENST00000608903 PDZRN3Q9UPQ7 1066 aa14.42□□□□□ -0.1
CTCFL-221ENST00000608903 PA2G4Q9UQ80 394 aaKnown RBP14.42□□□□□ -0.1
CTCFL-221ENST00000608903 DDX60Q8IY21 1712 aaKnown RBP14.41□□□□□ -0.1
CTCFL-221ENST00000608903 IRS4O14654 1257 aaPredicted RBP14.41□□□□□ -0.1
CTCFL-221ENST00000608903 MSH5O43196 834 aa14.41□□□□□ -0.1
CTCFL-221ENST00000608903 HCLS1P14317 486 aaPredicted RBP14.41□□□□□ -0.1
CTCFL-221ENST00000608903 ERFEQ4G0M1 354 aa14.41□□□□□ -0.1
CTCFL-221ENST00000608903 CCDC24Q8N4L8 307 aa14.41□□□□□ -0.1
CTCFL-221ENST00000608903 KLHDC4Q8TBB5 520 aa14.41□□□□□ -0.1
CTCFL-221ENST00000608903 C3orf67Q6ZVT6 689 aa14.41□□□□□ -0.1
CTCFL-221ENST00000608903 SETDB2Q96T68 719 aa14.41□□□□□ -0.1
CTCFL-221ENST00000608903 CSF1RP07333 972 aa14.4□□□□□ -0.1
CTCFL-221ENST00000608903 HMGB2P26583 209 aaKnown RBP14.4□□□□□ -0.1
CTCFL-221ENST00000608903 DDR1Q08345 913 aa14.4□□□□□ -0.1
CTCFL-221ENST00000608903 STK32BQ9NY57 414 aa14.4□□□□□ -0.1
CTCFL-221ENST00000608903 EXOC6BQ9Y2D4 811 aa14.4□□□□□ -0.1
CTCFL-221ENST00000608903 SH3TC1Q8TE82 1336 aa14.4□□□□□ -0.1
CTCFL-221ENST00000608903 CCDC85AQ96PX6 553 aaPredicted RBP14.39□□□□□ -0.11
CTCFL-221ENST00000608903 ABCC12Q96J65 1359 aa14.39□□□□□ -0.11
CTCFL-221ENST00000608903 QSER1Q2KHR3 1735 aa14.39□□□□□ -0.11
CTCFL-221ENST00000608903 TTLL11Q8NHH1 800 aa14.39□□□□□ -0.11
CTCFL-221ENST00000608903 HDAC5Q9UQL6 1122 aa14.39□□□□□ -0.11
CTCFL-221ENST00000608903 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.39□□□□□ -0.11
CTCFL-221ENST00000608903 SMARCA5O60264 1052 aaPredicted RBP14.38□□□□□ -0.11
CTCFL-221ENST00000608903 HMMRO75330 724 aa14.38□□□□□ -0.11
CTCFL-221ENST00000608903 PDE4AP27815 886 aa14.38□□□□□ -0.11
CTCFL-221ENST00000608903 NUCB1Q02818 461 aa14.38□□□□□ -0.11
CTCFL-221ENST00000608903 GCC1Q96CN9 775 aa14.38□□□□□ -0.11
CTCFL-221ENST00000608903 COL4A1P02462 1669 aa14.38□□□□□ -0.11
CTCFL-221ENST00000608903 APBB1O00213 710 aa14.38□□□□□ -0.11
CTCFL-221ENST00000608903 PDE8AO60658 829 aa14.38□□□□□ -0.11
CTCFL-221ENST00000608903 PTPN12Q05209 780 aaKnown RBP14.38□□□□□ -0.11
CTCFL-221ENST00000608903 FLAD1Q8NFF5 587 aa14.38□□□□□ -0.11
CTCFL-221ENST00000608903 NOP58Q9Y2X3 529 aaKnown RBP14.38□□□□□ -0.11
CTCFL-221ENST00000608903 MYH3P11055 1940 aa14.37□□□□□ -0.11
CTCFL-221ENST00000608903 POLRMTO00411 1230 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms