RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 CASP8AP2Q9UKL3 1982 aa13.32□□□□□ -0.28
LINC01954-201ENST00000607419 TBC1D9BQ66K14 1250 aa13.32□□□□□ -0.28
LINC01954-201ENST00000607419 ZNF496Q96IT1 587 aaPredicted RBP13.32□□□□□ -0.28
LINC01954-201ENST00000607419 CT47B1P0C2W7 299 aaPredicted RBP13.31□□□□□ -0.28
LINC01954-201ENST00000607419 FMR1Q06787 632 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC01954-201ENST00000607419 VSIG10Q8N0Z9 540 aa13.31□□□□□ -0.28
LINC01954-201ENST00000607419 C8orf58Q8NAV2 365 aa13.31□□□□□ -0.28
LINC01954-201ENST00000607419 TAF1DQ9H5J8 278 aaPredicted RBP13.31□□□□□ -0.28
LINC01954-201ENST00000607419 TMEM88BA6NKF7 163 aa13.3□□□□□ -0.28
LINC01954-201ENST00000607419 HOXB7P09629 217 aa13.3□□□□□ -0.28
LINC01954-201ENST00000607419 SNRPA1P09661 255 aaKnown RBP13.3□□□□□ -0.28
LINC01954-201ENST00000607419 CANXP27824 592 aaKnown RBP13.3□□□□□ -0.28
LINC01954-201ENST00000607419 RGS19P49795 217 aa13.3□□□□□ -0.28
LINC01954-201ENST00000607419 TWISTNBQ3B726 338 aaPredicted RBP13.3□□□□□ -0.28
LINC01954-201ENST00000607419 CHMP4AQ9BY43 222 aa13.3□□□□□ -0.28
LINC01954-201ENST00000607419 KRT24Q2M2I5 525 aa13.29□□□□□ -0.28
LINC01954-201ENST00000607419 PRR5LQ6MZQ0 368 aa13.29□□□□□ -0.28
LINC01954-201ENST00000607419 LDHDQ86WU2 507 aa13.29□□□□□ -0.28
LINC01954-201ENST00000607419 ZNF428Q96B54 188 aa13.29□□□□□ -0.28
LINC01954-201ENST00000607419 TEX13AQ9BXU3 409 aaPredicted RBP13.29□□□□□ -0.28
LINC01954-201ENST00000607419 LTBP1Q14766 1721 aa13.29□□□□□ -0.28
LINC01954-201ENST00000607419 TRPM7Q96QT4 1865 aa13.29□□□□□ -0.28
LINC01954-201ENST00000607419 SCN7AQ01118 1682 aa13.28□□□□□ -0.28
LINC01954-201ENST00000607419 ELL2O00472 640 aaPredicted RBP13.28□□□□□ -0.28
LINC01954-201ENST00000607419 VAMP4O75379 141 aa13.28□□□□□ -0.28
LINC01954-201ENST00000607419 EIF5P55010 431 aaKnown RBP13.28□□□□□ -0.28
LINC01954-201ENST00000607419 DEFB115Q30KQ5 88 aa13.28□□□□□ -0.28
LINC01954-201ENST00000607419 OLFM4Q6UX06 510 aa13.28□□□□□ -0.28
LINC01954-201ENST00000607419 TSPYL6Q8N831 410 aa13.28□□□□□ -0.28
LINC01954-201ENST00000607419 AIDAQ96BJ3 306 aa13.28□□□□□ -0.28
LINC01954-201ENST00000607419 WDR33Q9C0J8 1336 aaKnown RBP13.28□□□□□ -0.28
LINC01954-201ENST00000607419 LTBP3Q9NS15 1303 aa13.28□□□□□ -0.28
LINC01954-201ENST00000607419 RASSF10A6NK89 507 aa13.27□□□□□ -0.29
LINC01954-201ENST00000607419 CCDC85CA6NKD9 419 aa13.27□□□□□ -0.29
LINC01954-201ENST00000607419 CENPBP07199 599 aaPredicted RBP13.27□□□□□ -0.29
LINC01954-201ENST00000607419 MAP1SQ66K74 1059 aaPredicted RBP13.27□□□□□ -0.29
LINC01954-201ENST00000607419 C7orf43Q8WVR3 580 aa13.27□□□□□ -0.29
LINC01954-201ENST00000607419 L3MBTL3Q96JM7 780 aaPredicted RBP13.27□□□□□ -0.29
LINC01954-201ENST00000607419 BRIP1Q9BX63 1249 aa13.27□□□□□ -0.29
LINC01954-201ENST00000607419 TAOK3Q9H2K8 898 aa13.27□□□□□ -0.29
LINC01954-201ENST00000607419 ZNF541Q9H0D2 1346 aa13.27□□□□□ -0.29
LINC01954-201ENST00000607419 MLLT1Q03111 559 aaPredicted RBP13.26□□□□□ -0.29
LINC01954-201ENST00000607419 EAPPQ56P03 285 aaPredicted RBP13.26□□□□□ -0.29
LINC01954-201ENST00000607419 THSD7BQ9C0I4 1608 aa13.26□□□□□ -0.29
LINC01954-201ENST00000607419 PCDH10Q9P2E7 1040 aa13.26□□□□□ -0.29
LINC01954-201ENST00000607419 TBC1D2BQ9UPU7 963 aa13.26□□□□□ -0.29
LINC01954-201ENST00000607419 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
LINC01954-201ENST00000607419 PRAMEF22A3QJZ6 481 aa13.25□□□□□ -0.29
LINC01954-201ENST00000607419 STARD3NLO95772 234 aa13.25□□□□□ -0.29
LINC01954-201ENST00000607419 SRGNP10124 158 aa13.25□□□□□ -0.29
LINC01954-201ENST00000607419 HDGFL1Q5TGJ6 251 aa13.25□□□□□ -0.29
LINC01954-201ENST00000607419 CCDC30Q5VVM6 783 aa13.25□□□□□ -0.29
LINC01954-201ENST00000607419 PRPF40BQ6NWY9 871 aaKnown RBP13.25□□□□□ -0.29
LINC01954-201ENST00000607419 CNTROBQ8N137 903 aa13.25□□□□□ -0.29
LINC01954-201ENST00000607419 TSKSQ9UJT2 592 aa13.25□□□□□ -0.29
LINC01954-201ENST00000607419 USP16Q9Y5T5 823 aa13.25□□□□□ -0.29
LINC01954-201ENST00000607419 ERBB4Q15303 1308 aa13.24□□□□□ -0.29
LINC01954-201ENST00000607419 EIF2S2P20042 333 aaKnown RBP13.24□□□□□ -0.29
LINC01954-201ENST00000607419 PDE6BP35913 854 aa13.24□□□□□ -0.29
LINC01954-201ENST00000607419 ALDH1L2Q3SY69 923 aa13.24□□□□□ -0.29
LINC01954-201ENST00000607419 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
LINC01954-201ENST00000607419 COL4A5P29400 1685 aa13.24□□□□□ -0.29
LINC01954-201ENST00000607419 STK31Q9BXU1 1019 aa13.23□□□□□ -0.29
LINC01954-201ENST00000607419 ZNF277Q9NRM2 450 aaPredicted RBP13.23□□□□□ -0.29
LINC01954-201ENST00000607419 RCAN3Q9UKA8 241 aa13.23□□□□□ -0.29
LINC01954-201ENST00000607419 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
LINC01954-201ENST00000607419 IQCA1LA6NCM1 817 aa13.22□□□□□ -0.29
LINC01954-201ENST00000607419 ZBTB22O15209 634 aa13.22□□□□□ -0.29
LINC01954-201ENST00000607419 EPHX2P34913 555 aa13.22□□□□□ -0.29
LINC01954-201ENST00000607419 RARSP54136 660 aaKnown RBP13.22□□□□□ -0.29
LINC01954-201ENST00000607419 DBF4Q9UBU7 674 aaPredicted RBP13.22□□□□□ -0.29
LINC01954-201ENST00000607419 HACL1Q9UJ83 578 aa13.22□□□□□ -0.29
LINC01954-201ENST00000607419 NUP98P52948 1817 aa13.22□□□□□ -0.29
LINC01954-201ENST00000607419 A1BGP04217 495 aa13.21□□□□□ -0.29
LINC01954-201ENST00000607419 CST9Q5W186 159 aa13.21□□□□□ -0.29
LINC01954-201ENST00000607419 STYK1Q6J9G0 422 aa13.21□□□□□ -0.29
LINC01954-201ENST00000607419 CYP4F22Q6NT55 531 aa13.21□□□□□ -0.29
LINC01954-201ENST00000607419 SLC51AQ86UW1 340 aa13.21□□□□□ -0.29
LINC01954-201ENST00000607419 SSH1Q8WYL5 1049 aa13.21□□□□□ -0.29
LINC01954-201ENST00000607419 NECTIN2Q92692 538 aa13.21□□□□□ -0.29
LINC01954-201ENST00000607419 CNKSR1Q969H4 720 aa13.21□□□□□ -0.29
LINC01954-201ENST00000607419 DDX21Q9NR30 783 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC01954-201ENST00000607419 FZD9O00144 591 aa13.2□□□□□ -0.3
LINC01954-201ENST00000607419 AOC2O75106 756 aa13.2□□□□□ -0.3
LINC01954-201ENST00000607419 CAMTA2O94983 1202 aa13.2□□□□□ -0.3
LINC01954-201ENST00000607419 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
LINC01954-201ENST00000607419 MAP2K1Q02750 393 aaPredicted RBP13.2□□□□□ -0.3
LINC01954-201ENST00000607419 MASTLQ96GX5 879 aa13.2□□□□□ -0.3
LINC01954-201ENST00000607419 SMC4Q9NTJ3 1288 aa13.2□□□□□ -0.3
LINC01954-201ENST00000607419 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
LINC01954-201ENST00000607419 CHPF2Q9P2E5 772 aa13.2□□□□□ -0.3
LINC01954-201ENST00000607419 TCERG1O14776 1098 aaKnown RBP13.19□□□□□ -0.3
LINC01954-201ENST00000607419 PIP4K2AP48426 406 aaPredicted RBP13.19□□□□□ -0.3
LINC01954-201ENST00000607419 PDIA6Q15084 440 aa13.19□□□□□ -0.3
LINC01954-201ENST00000607419 MRPL50Q8N5N7 158 aaKnown RBP13.19□□□□□ -0.3
LINC01954-201ENST00000607419 PDZRN3Q9UPQ7 1066 aa13.19□□□□□ -0.3
LINC01954-201ENST00000607419 ZNF330Q9Y3S2 320 aaPredicted RBP13.19□□□□□ -0.3
LINC01954-201ENST00000607419 ANKRD36CQ5JPF3 1778 aa13.19□□□□□ -0.3
LINC01954-201ENST00000607419 POLR2AP24928 1970 aaKnown RBP13.18□□□□□ -0.3
LINC01954-201ENST00000607419 NBPF26B4DH59 902 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms