RNA–Protein interactions for RNA: ENST00000607320.5

RFTN1-212, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 3

Gene RFTN1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-212ENST00000607320 HLFQ16534 295 aa14.03□□□□□ -0.16
RFTN1-212ENST00000607320 NGEFQ8N5V2 710 aa14.03□□□□□ -0.16
RFTN1-212ENST00000607320 NYXQ9GZU5 481 aa14.03□□□□□ -0.16
RFTN1-212ENST00000607320 BABAM1Q9NWV8 329 aa14.03□□□□□ -0.16
RFTN1-212ENST00000607320 RRP7AQ9Y3A4 280 aaKnown RBP14.03□□□□□ -0.16
RFTN1-212ENST00000607320 ERBB4Q15303 1308 aa14.03□□□□□ -0.16
RFTN1-212ENST00000607320 MAP3K15Q6ZN16 1313 aa14.03□□□□□ -0.16
RFTN1-212ENST00000607320 KLRG2A4D1S0 409 aaPredicted RBP14.02□□□□□ -0.17
RFTN1-212ENST00000607320 FAM177BA6PVY3 158 aa14.02□□□□□ -0.17
RFTN1-212ENST00000607320 TMPOP42166 694 aaKnown RBP14.02□□□□□ -0.17
RFTN1-212ENST00000607320 ERFEQ4G0M1 354 aa14.02□□□□□ -0.17
RFTN1-212ENST00000607320 MYL6BP14649 208 aa14.01□□□□□ -0.17
RFTN1-212ENST00000607320 CCDC93Q567U6 631 aa14.01□□□□□ -0.17
RFTN1-212ENST00000607320 SMC1BQ8NDV3 1235 aa14.01□□□□□ -0.17
RFTN1-212ENST00000607320 ALDH1B1P30837 517 aa14□□□□□ -0.17
RFTN1-212ENST00000607320 WDR43Q15061 677 aaKnown RBP eCLIP14□□□□□ -0.17
RFTN1-212ENST00000607320 IBTKQ9P2D0 1353 aaPredicted RBP13.99□□□□□ -0.17
RFTN1-212ENST00000607320 RIOK3O14730 519 aaKnown RBP13.99□□□□□ -0.17
RFTN1-212ENST00000607320 NUBP1P53384 320 aa13.99□□□□□ -0.17
RFTN1-212ENST00000607320 TTLL7Q6ZT98 887 aa13.99□□□□□ -0.17
RFTN1-212ENST00000607320 GIGYF2Q6Y7W6 1299 aaKnown RBP13.98□□□□□ -0.17
RFTN1-212ENST00000607320 RTKN2Q8IZC4 609 aa13.98□□□□□ -0.17
RFTN1-212ENST00000607320 C7orf43Q8WVR3 580 aa13.98□□□□□ -0.17
RFTN1-212ENST00000607320 RUNDC1Q96C34 613 aa13.98□□□□□ -0.17
RFTN1-212ENST00000607320 ZBTB3Q9H5J0 574 aa13.98□□□□□ -0.17
RFTN1-212ENST00000607320 RIC1Q4ADV7 1423 aa13.98□□□□□ -0.17
RFTN1-212ENST00000607320 EIF2S2P20042 333 aaKnown RBP13.97□□□□□ -0.17
RFTN1-212ENST00000607320 FKBP4Q02790 459 aaKnown RBP eCLIP13.97□□□□□ -0.17
RFTN1-212ENST00000607320 NEUROD2Q15784 382 aa13.97□□□□□ -0.17
RFTN1-212ENST00000607320 PPP1R42Q7Z4L9 355 aa13.97□□□□□ -0.17
RFTN1-212ENST00000607320 NUTM1Q86Y26 1132 aa13.97□□□□□ -0.17
RFTN1-212ENST00000607320 CCDC146Q8IYE0 955 aa13.97□□□□□ -0.17
RFTN1-212ENST00000607320 SCN4AP35499 1836 aa13.97□□□□□ -0.17
RFTN1-212ENST00000607320 ANKRD36CQ5JPF3 1778 aa13.96□□□□□ -0.17
RFTN1-212ENST00000607320 GPTP24298 496 aa13.96□□□□□ -0.17
RFTN1-212ENST00000607320 CRY2Q49AN0 593 aa13.96□□□□□ -0.17
RFTN1-212ENST00000607320 PARP10Q53GL7 1025 aa13.96□□□□□ -0.17
RFTN1-212ENST00000607320 ZNF34Q8IZ26 560 aa13.96□□□□□ -0.17
RFTN1-212ENST00000607320 DNAJC5GQ8N7S2 189 aa13.96□□□□□ -0.17
RFTN1-212ENST00000607320 RPGRQ92834 1020 aaKnown RBP13.96□□□□□ -0.17
RFTN1-212ENST00000607320 ABCC12Q96J65 1359 aa13.96□□□□□ -0.18
RFTN1-212ENST00000607320 UBN2Q6ZU65 1347 aa13.95□□□□□ -0.18
RFTN1-212ENST00000607320 POTECB2RU33 542 aa13.95□□□□□ -0.18
RFTN1-212ENST00000607320 CC2D2BQ6DHV5 1058 aa13.95□□□□□ -0.18
RFTN1-212ENST00000607320 IQCA1LA6NCM1 817 aa13.94□□□□□ -0.18
RFTN1-212ENST00000607320 PDIA6Q15084 440 aa13.94□□□□□ -0.18
RFTN1-212ENST00000607320 HSP90AB3PQ58FF7 597 aa13.94□□□□□ -0.18
RFTN1-212ENST00000607320 SUSD4Q5VX71 490 aa13.94□□□□□ -0.18
RFTN1-212ENST00000607320 CHL1O00533 1208 aa13.93□□□□□ -0.18
RFTN1-212ENST00000607320 DDNO94850 711 aaPredicted RBP13.93□□□□□ -0.18
RFTN1-212ENST00000607320 NTSR2O95665 410 aa13.93□□□□□ -0.18
RFTN1-212ENST00000607320 HOXA10P31260 410 aaPredicted RBP13.93□□□□□ -0.18
RFTN1-212ENST00000607320 GRIPAP1Q4V328 841 aa13.93□□□□□ -0.18
RFTN1-212ENST00000607320 LRP10Q7Z4F1 713 aa13.93□□□□□ -0.18
RFTN1-212ENST00000607320 KLRG1Q96E93 195 aa13.93□□□□□ -0.18
RFTN1-212ENST00000607320 RBM17Q96I25 401 aaKnown RBP13.93□□□□□ -0.18
RFTN1-212ENST00000607320 PSMD1Q99460 953 aa13.93□□□□□ -0.18
RFTN1-212ENST00000607320 PRKRIP1Q9H875 184 aaPredicted RBP13.93□□□□□ -0.18
RFTN1-212ENST00000607320 ZNF277Q9NRM2 450 aaPredicted RBP13.93□□□□□ -0.18
RFTN1-212ENST00000607320 ADAMTS8Q9UP79 889 aa13.93□□□□□ -0.18
RFTN1-212ENST00000607320 LAS1LQ9Y4W2 734 aaKnown RBP13.93□□□□□ -0.18
RFTN1-212ENST00000607320 RNF123Q5XPI4 1314 aa13.92□□□□□ -0.18
RFTN1-212ENST00000607320 ANXA1P04083 346 aa13.92□□□□□ -0.18
RFTN1-212ENST00000607320 IARSP41252 1262 aaKnown RBP13.92□□□□□ -0.18
RFTN1-212ENST00000607320 HTRA3P83110 453 aa13.92□□□□□ -0.18
RFTN1-212ENST00000607320 PROSER3Q2NL68 480 aa13.92□□□□□ -0.18
RFTN1-212ENST00000607320 SYNE4Q8N205 404 aa13.92□□□□□ -0.18
RFTN1-212ENST00000607320 NLRP3Q96P20 1036 aa13.92□□□□□ -0.18
RFTN1-212ENST00000607320 UTP14AQ9BVJ6 771 aaKnown RBP13.92□□□□□ -0.18
RFTN1-212ENST00000607320 DDX21Q9NR30 783 aaKnown RBP eCLIP13.92□□□□□ -0.18
RFTN1-212ENST00000607320 TRIM35Q9UPQ4 493 aa13.92□□□□□ -0.18
RFTN1-212ENST00000607320 HOXB7P09629 217 aa13.91□□□□□ -0.18
RFTN1-212ENST00000607320 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
RFTN1-212ENST00000607320 OLFM4Q6UX06 510 aa13.91□□□□□ -0.18
RFTN1-212ENST00000607320 COPS6Q7L5N1 327 aa13.91□□□□□ -0.18
RFTN1-212ENST00000607320 SPDYE1Q8NFV5 336 aaPredicted RBP13.91□□□□□ -0.18
RFTN1-212ENST00000607320 XAGE3Q8WTP9 111 aa13.91□□□□□ -0.18
RFTN1-212ENST00000607320 NECTIN2Q92692 538 aa13.91□□□□□ -0.18
RFTN1-212ENST00000607320 FAM212AQ96EL1 285 aa13.91□□□□□ -0.18
RFTN1-212ENST00000607320 L3MBTL3Q96JM7 780 aaPredicted RBP13.91□□□□□ -0.18
RFTN1-212ENST00000607320 CRAMP1Q96RY5 1269 aa13.91□□□□□ -0.18
RFTN1-212ENST00000607320 TMX4Q9H1E5 349 aaPredicted RBP13.91□□□□□ -0.18
RFTN1-212ENST00000607320 LAMB2P55268 1798 aa13.91□□□□□ -0.18
RFTN1-212ENST00000607320 AIMP1Q12904 312 aaKnown RBP13.9□□□□□ -0.18
RFTN1-212ENST00000607320 HDGFL1Q5TGJ6 251 aa13.9□□□□□ -0.18
RFTN1-212ENST00000607320 CHADLQ6NUI6 762 aa13.9□□□□□ -0.18
RFTN1-212ENST00000607320 JDP2Q8WYK2 163 aa13.9□□□□□ -0.18
RFTN1-212ENST00000607320 SNED1Q8TER0 1413 aa13.9□□□□□ -0.19
RFTN1-212ENST00000607320 FZD9O00144 591 aa13.89□□□□□ -0.19
RFTN1-212ENST00000607320 PPEF1O14829 653 aaPredicted RBP13.89□□□□□ -0.19
RFTN1-212ENST00000607320 SLC10A5Q5PT55 438 aa13.89□□□□□ -0.19
RFTN1-212ENST00000607320 JMYQ8N9B5 988 aa13.89□□□□□ -0.19
RFTN1-212ENST00000607320 ZNF541Q9H0D2 1346 aa13.89□□□□□ -0.19
RFTN1-212ENST00000607320 GTPBP6O43824 516 aaPredicted RBP13.88□□□□□ -0.19
RFTN1-212ENST00000607320 CALD1Q05682 793 aaKnown RBP13.88□□□□□ -0.19
RFTN1-212ENST00000607320 TCIRG1Q13488 830 aa13.88□□□□□ -0.19
RFTN1-212ENST00000607320 KRT24Q2M2I5 525 aa13.88□□□□□ -0.19
RFTN1-212ENST00000607320 IFFO2Q5TF58 517 aa13.88□□□□□ -0.19
RFTN1-212ENST00000607320 LDHDQ86WU2 507 aa13.88□□□□□ -0.19
RFTN1-212ENST00000607320 TAF1DQ9H5J8 278 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms