RNA–Protein interactions for RNA: ENST00000607316.2

TMEM259-212, Transcript of transmembrane protein 259, humanhuman

TSL 2

Gene TMEM259, Length 477 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-212ENST00000607316 SLX4Q8IY92 1834 aa17.55■□□□□ 0.4
TMEM259-212ENST00000607316 KLRG2A4D1S0 409 aaPredicted RBP17.54■□□□□ 0.4
TMEM259-212ENST00000607316 SLC4A2P04920 1241 aa17.54■□□□□ 0.4
TMEM259-212ENST00000607316 PARP10Q53GL7 1025 aa17.54■□□□□ 0.4
TMEM259-212ENST00000607316 HSP90AB3PQ58FF7 597 aa17.54■□□□□ 0.4
TMEM259-212ENST00000607316 MYD88Q99836 296 aa17.54■□□□□ 0.4
TMEM259-212ENST00000607316 ISCA1Q9BUE6 129 aa17.54■□□□□ 0.4
TMEM259-212ENST00000607316 UTP14AQ9BVJ6 771 aaKnown RBP17.54■□□□□ 0.4
TMEM259-212ENST00000607316 ADCY9O60503 1353 aa17.53■□□□□ 0.4
TMEM259-212ENST00000607316 RASSF7Q02833 373 aa17.53■□□□□ 0.4
TMEM259-212ENST00000607316 PPP1R42Q7Z4L9 355 aa17.53■□□□□ 0.4
TMEM259-212ENST00000607316 SLC51AQ86UW1 340 aa17.53■□□□□ 0.4
TMEM259-212ENST00000607316 MASTLQ96GX5 879 aa17.53■□□□□ 0.4
TMEM259-212ENST00000607316 MAP3K2Q9Y2U5 619 aa17.53■□□□□ 0.4
TMEM259-212ENST00000607316 LAMB2P55268 1798 aa17.53■□□□□ 0.4
TMEM259-212ENST00000607316 C21orf2O43822 256 aa17.52■□□□□ 0.4
TMEM259-212ENST00000607316 HCLS1P14317 486 aaPredicted RBP17.52■□□□□ 0.4
TMEM259-212ENST00000607316 SLFN5Q08AF3 891 aa17.52■□□□□ 0.4
TMEM259-212ENST00000607316 RTL5Q5HYW3 569 aaPredicted RBP17.52■□□□□ 0.4
TMEM259-212ENST00000607316 STYK1Q6J9G0 422 aa17.52■□□□□ 0.4
TMEM259-212ENST00000607316 PRPF40BQ6NWY9 871 aaKnown RBP17.52■□□□□ 0.4
TMEM259-212ENST00000607316 TRMT112Q9UI30 125 aaKnown RBP17.52■□□□□ 0.4
TMEM259-212ENST00000607316 RIC1Q4ADV7 1423 aa17.52■□□□□ 0.4
TMEM259-212ENST00000607316 PI4KAP2A4QPH2 592 aa17.51■□□□□ 0.39
TMEM259-212ENST00000607316 E9PSI1 815 aa17.51■□□□□ 0.39
TMEM259-212ENST00000607316 OLFM4Q6UX06 510 aa17.51■□□□□ 0.39
TMEM259-212ENST00000607316 DDX60Q8IY21 1712 aaKnown RBP17.51■□□□□ 0.39
TMEM259-212ENST00000607316 PI4KAP1Q8N8J0 262 aa17.51■□□□□ 0.39
TMEM259-212ENST00000607316 PDZRN3Q9UPQ7 1066 aa17.51■□□□□ 0.39
TMEM259-212ENST00000607316 NPR1P16066 1061 aa17.5■□□□□ 0.39
TMEM259-212ENST00000607316 PRELPP51888 382 aa17.5■□□□□ 0.39
TMEM259-212ENST00000607316 FLIIQ13045 1269 aa17.5■□□□□ 0.39
TMEM259-212ENST00000607316 CRY2Q49AN0 593 aa17.5■□□□□ 0.39
TMEM259-212ENST00000607316 FAM89AQ96GI7 184 aa17.5■□□□□ 0.39
TMEM259-212ENST00000607316 DDX58O95786 925 aaKnown RBP17.49■□□□□ 0.39
TMEM259-212ENST00000607316 KSR2Q6VAB6 950 aa17.49■□□□□ 0.39
TMEM259-212ENST00000607316 ZNF784Q8NCA9 323 aaPredicted RBP17.49■□□□□ 0.39
TMEM259-212ENST00000607316 JARID2Q92833 1246 aaPredicted RBP17.49■□□□□ 0.39
TMEM259-212ENST00000607316 CNKSR1Q969H4 720 aa17.49■□□□□ 0.39
TMEM259-212ENST00000607316 METTL22Q9BUU2 404 aaPredicted RBP17.49■□□□□ 0.39
TMEM259-212ENST00000607316 CHMP4AQ9BY43 222 aa17.49■□□□□ 0.39
TMEM259-212ENST00000607316 SH3TC1Q8TE82 1336 aa17.48■□□□□ 0.39
TMEM259-212ENST00000607316 NFKBIEO00221 500 aa17.48■□□□□ 0.39
TMEM259-212ENST00000607316 SLC10A5Q5PT55 438 aa17.48■□□□□ 0.39
TMEM259-212ENST00000607316 COL4A1P02462 1669 aa17.48■□□□□ 0.39
TMEM259-212ENST00000607316 IGKV5-2P06315 115 aa17.47■□□□□ 0.39
TMEM259-212ENST00000607316 FKBP5Q13451 457 aaPredicted RBP17.47■□□□□ 0.39
TMEM259-212ENST00000607316 CWF19L2Q2TBE0 894 aaKnown RBP17.47■□□□□ 0.39
TMEM259-212ENST00000607316 TRMT2AQ8IZ69 625 aaKnown RBP17.47■□□□□ 0.39
TMEM259-212ENST00000607316 RPGRQ92834 1020 aaKnown RBP17.47■□□□□ 0.39
TMEM259-212ENST00000607316 SBF1O95248 1867 aa17.47■□□□□ 0.39
TMEM259-212ENST00000607316 RNF123Q5XPI4 1314 aa17.47■□□□□ 0.39
TMEM259-212ENST00000607316 FER1L6Q2WGJ9 1857 aa17.46■□□□□ 0.39
TMEM259-212ENST00000607316 HNRNPUQ00839 825 aaKnown RBP eCLIP17.46■□□□□ 0.39
TMEM259-212ENST00000607316 TRIM28Q13263 835 aaKnown RBP17.46■□□□□ 0.39
TMEM259-212ENST00000607316 C9orf131Q5VYM1 1079 aa17.46■□□□□ 0.39
TMEM259-212ENST00000607316 C7orf43Q8WVR3 580 aa17.46■□□□□ 0.39
TMEM259-212ENST00000607316 NLRP3Q96P20 1036 aa17.46■□□□□ 0.39
TMEM259-212ENST00000607316 TAF1P21675 1872 aa17.46■□□□□ 0.38
TMEM259-212ENST00000607316 F6X3S4 739 aa17.45■□□□□ 0.38
TMEM259-212ENST00000607316 ZNF526Q8TF50 670 aaPredicted RBP17.45■□□□□ 0.38
TMEM259-212ENST00000607316 BCL2L13Q9BXK5 485 aa17.45■□□□□ 0.38
TMEM259-212ENST00000607316 ABCC4O15439 1325 aa17.45■□□□□ 0.38
TMEM259-212ENST00000607316 CACNA1FO60840 1977 aa17.44■□□□□ 0.38
TMEM259-212ENST00000607316 HOXA10P31260 410 aaPredicted RBP17.44■□□□□ 0.38
TMEM259-212ENST00000607316 CWC25Q9NXE8 425 aaPredicted RBP17.44■□□□□ 0.38
TMEM259-212ENST00000607316 RNF181Q9P0P0 153 aa17.44■□□□□ 0.38
TMEM259-212ENST00000607316 NEURL1BA8MQ27 555 aa17.43■□□□□ 0.38
TMEM259-212ENST00000607316 IRS4O14654 1257 aaPredicted RBP17.43■□□□□ 0.38
TMEM259-212ENST00000607316 ALDH1B1P30837 517 aa17.43■□□□□ 0.38
TMEM259-212ENST00000607316 ZBTB38Q8NAP3 1195 aaPredicted RBP17.43■□□□□ 0.38
TMEM259-212ENST00000607316 CCDC191Q8NCU4 936 aa17.43■□□□□ 0.38
TMEM259-212ENST00000607316 DNAAF4Q8WXU2 420 aa17.43■□□□□ 0.38
TMEM259-212ENST00000607316 SSH1Q8WYL5 1049 aa17.43■□□□□ 0.38
TMEM259-212ENST00000607316 SNED1Q8TER0 1413 aa17.43■□□□□ 0.38
TMEM259-212ENST00000607316 CCDC88AQ3V6T2 1871 aa17.43■□□□□ 0.38
TMEM259-212ENST00000607316 TIAM2Q8IVF5 1701 aa17.42■□□□□ 0.38
TMEM259-212ENST00000607316 MRPL50Q8N5N7 158 aaKnown RBP17.42■□□□□ 0.38
TMEM259-212ENST00000607316 RBM17Q96I25 401 aaKnown RBP17.42■□□□□ 0.38
TMEM259-212ENST00000607316 PPEF1O14829 653 aaPredicted RBP17.41■□□□□ 0.38
TMEM259-212ENST00000607316 PCCAP05165 728 aaPredicted RBP17.41■□□□□ 0.38
TMEM259-212ENST00000607316 NEXNQ0ZGT2 675 aa17.41■□□□□ 0.38
TMEM259-212ENST00000607316 CCDC93Q567U6 631 aa17.41■□□□□ 0.38
TMEM259-212ENST00000607316 CRAMP1Q96RY5 1269 aa17.41■□□□□ 0.38
TMEM259-212ENST00000607316 TAOK3Q9H2K8 898 aa17.41■□□□□ 0.38
TMEM259-212ENST00000607316 LMNB1P20700 586 aa17.4■□□□□ 0.38
TMEM259-212ENST00000607316 CCDC85AQ96PX6 553 aaPredicted RBP17.4■□□□□ 0.38
TMEM259-212ENST00000607316 GCKRQ14397 625 aa17.38■□□□□ 0.37
TMEM259-212ENST00000607316 SF3B3Q15393 1217 aaKnown RBP17.38■□□□□ 0.37
TMEM259-212ENST00000607316 BEND3Q5T5X7 828 aa17.38■□□□□ 0.37
TMEM259-212ENST00000607316 DDX46Q7L014 1031 aaKnown RBP17.38■□□□□ 0.37
TMEM259-212ENST00000607316 UBE3BQ7Z3V4 1068 aa17.38■□□□□ 0.37
TMEM259-212ENST00000607316 CELF1Q92879 486 aaKnown RBP17.38■□□□□ 0.37
TMEM259-212ENST00000607316 ZNF277Q9NRM2 450 aaPredicted RBP17.38■□□□□ 0.37
TMEM259-212ENST00000607316 CASP7P55210 303 aa17.37■□□□□ 0.37
TMEM259-212ENST00000607316 GRAPQ13588 217 aa17.37■□□□□ 0.37
TMEM259-212ENST00000607316 SOGA3Q5TF21 947 aa17.37■□□□□ 0.37
TMEM259-212ENST00000607316 SLC4A10Q6U841 1118 aa17.37■□□□□ 0.37
TMEM259-212ENST00000607316 LINS1Q8NG48 757 aa17.37■□□□□ 0.37
TMEM259-212ENST00000607316 GRAPLQ8TC17 118 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 197.1 ms