RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 SCAND2PQ9GZW5 306 aaPredicted RBP14.84□□□□□ -0.03
MSH6-212ENST00000607272 ADAMTS13Q76LX8 1427 aa14.83□□□□□ -0.03
MSH6-212ENST00000607272 HIP1O00291 1037 aa14.83□□□□□ -0.04
MSH6-212ENST00000607272 TTC6Q86TZ1 520 aa14.83□□□□□ -0.04
MSH6-212ENST00000607272 MRVI1Q9Y6F6 885 aa14.83□□□□□ -0.04
MSH6-212ENST00000607272 FAM177BA6PVY3 158 aa14.82□□□□□ -0.04
MSH6-212ENST00000607272 ANKRD1Q15327 319 aa14.82□□□□□ -0.04
MSH6-212ENST00000607272 ERC1Q8IUD2 1116 aa14.82□□□□□ -0.04
MSH6-212ENST00000607272 NGDNQ8NEJ9 315 aaKnown RBP14.82□□□□□ -0.04
MSH6-212ENST00000607272 PI4KAP2A4QPH2 592 aa14.82□□□□□ -0.04
MSH6-212ENST00000607272 GOLGA6L4A6NEF3 574 aa14.82□□□□□ -0.04
MSH6-212ENST00000607272 ST3GAL1Q11201 340 aa14.82□□□□□ -0.04
MSH6-212ENST00000607272 ATP2B3Q16720 1220 aa14.82□□□□□ -0.04
MSH6-212ENST00000607272 PI4KAP1Q8N8J0 262 aa14.82□□□□□ -0.04
MSH6-212ENST00000607272 TNMDQ9H2S6 317 aa14.82□□□□□ -0.04
MSH6-212ENST00000607272 HDAC5Q9UQL6 1122 aa14.82□□□□□ -0.04
MSH6-212ENST00000607272 IFIT2P09913 472 aaKnown RBP14.81□□□□□ -0.04
MSH6-212ENST00000607272 HOXC9P31274 260 aa14.81□□□□□ -0.04
MSH6-212ENST00000607272 SYCP1Q15431 976 aa14.81□□□□□ -0.04
MSH6-212ENST00000607272 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.81□□□□□ -0.04
MSH6-212ENST00000607272 DDX19AQ9NUU7 478 aaKnown RBP14.81□□□□□ -0.04
MSH6-212ENST00000607272 TPCN1Q9ULQ1 816 aa14.81□□□□□ -0.04
MSH6-212ENST00000607272 NPHP3Q7Z494 1330 aa14.81□□□□□ -0.04
MSH6-212ENST00000607272 EIF2S2P20042 333 aaKnown RBP14.81□□□□□ -0.04
MSH6-212ENST00000607272 PTGS1P23219 599 aa14.81□□□□□ -0.04
MSH6-212ENST00000607272 KCNJ4P48050 445 aa14.81□□□□□ -0.04
MSH6-212ENST00000607272 CREB3L3Q68CJ9 461 aa14.81□□□□□ -0.04
MSH6-212ENST00000607272 NECAB1Q8N987 351 aa14.81□□□□□ -0.04
MSH6-212ENST00000607272 MAP4K1Q92918 833 aa14.81□□□□□ -0.04
MSH6-212ENST00000607272 FEZ1Q99689 392 aa14.81□□□□□ -0.04
MSH6-212ENST00000607272 RBM8AQ9Y5S9 174 aaKnown RBP14.81□□□□□ -0.04
MSH6-212ENST00000607272 TNRQ92752 1358 aa14.8□□□□□ -0.04
MSH6-212ENST00000607272 LIG1P18858 919 aa14.8□□□□□ -0.04
MSH6-212ENST00000607272 FAM69CQ0P6D2 419 aa14.8□□□□□ -0.04
MSH6-212ENST00000607272 RBM43Q6ZSC3 357 aaKnown RBP14.8□□□□□ -0.04
MSH6-212ENST00000607272 LUZP1Q86V48 1076 aa14.8□□□□□ -0.04
MSH6-212ENST00000607272 ALDH8A1Q9H2A2 487 aaPredicted RBP14.8□□□□□ -0.04
MSH6-212ENST00000607272 KIF20AO95235 890 aa14.8□□□□□ -0.04
MSH6-212ENST00000607272 CAVIN2O95810 425 aa14.8□□□□□ -0.04
MSH6-212ENST00000607272 NLRP6P59044 892 aa14.8□□□□□ -0.04
MSH6-212ENST00000607272 EIF4A1P60842 406 aaKnown RBP14.8□□□□□ -0.04
MSH6-212ENST00000607272 CAMK4Q16566 473 aa14.8□□□□□ -0.04
MSH6-212ENST00000607272 RNF20Q5VTR2 975 aa14.8□□□□□ -0.04
MSH6-212ENST00000607272 CDC37L1Q7L3B6 337 aa14.8□□□□□ -0.04
MSH6-212ENST00000607272 CCDC186Q7Z3E2 898 aa14.8□□□□□ -0.04
MSH6-212ENST00000607272 CBX8Q9HC52 389 aa14.8□□□□□ -0.04
MSH6-212ENST00000607272 DACT1Q9NYF0 836 aa14.8□□□□□ -0.04
MSH6-212ENST00000607272 CHPF2Q9P2E5 772 aa14.8□□□□□ -0.04
MSH6-212ENST00000607272 PLEKHG1Q9ULL1 1385 aa14.79□□□□□ -0.04
MSH6-212ENST00000607272 DRC7Q8IY82 874 aa14.79□□□□□ -0.04
MSH6-212ENST00000607272 SPATA32Q96LK8 384 aa14.79□□□□□ -0.04
MSH6-212ENST00000607272 SNRKQ9NRH2 765 aa14.79□□□□□ -0.04
MSH6-212ENST00000607272 CEMIPQ8WUJ3 1361 aa14.79□□□□□ -0.04
MSH6-212ENST00000607272 ADGRL3Q9HAR2 1447 aa14.79□□□□□ -0.04
MSH6-212ENST00000607272 SMTNL1A8MU46 457 aa14.78□□□□□ -0.04
MSH6-212ENST00000607272 ANO6Q4KMQ2 910 aa14.78□□□□□ -0.04
MSH6-212ENST00000607272 FERMT3Q86UX7 667 aa14.78□□□□□ -0.04
MSH6-212ENST00000607272 PLA2G4DQ86XP0 818 aa14.78□□□□□ -0.04
MSH6-212ENST00000607272 TRIM5Q9C035 493 aa14.78□□□□□ -0.04
MSH6-212ENST00000607272 ZHX1Q9UKY1 873 aaPredicted RBP14.78□□□□□ -0.04
MSH6-212ENST00000607272 CHMP3Q9Y3E7 222 aa14.78□□□□□ -0.04
MSH6-212ENST00000607272 ZNF75DP51815 510 aa14.78□□□□□ -0.04
MSH6-212ENST00000607272 BLOC1S2Q6QNY1 142 aa14.78□□□□□ -0.04
MSH6-212ENST00000607272 TDRD7Q8NHU6 1098 aaKnown RBP14.78□□□□□ -0.04
MSH6-212ENST00000607272 CLSTN2Q9H4D0 955 aa14.78□□□□□ -0.04
MSH6-212ENST00000607272 PAXBP1Q9Y5B6 917 aa14.78□□□□□ -0.04
MSH6-212ENST00000607272 NWD1Q149M9 1564 aa14.77□□□□□ -0.04
MSH6-212ENST00000607272 SLC27A2O14975 620 aa14.77□□□□□ -0.04
MSH6-212ENST00000607272 ALDH1L1O75891 902 aa14.77□□□□□ -0.04
MSH6-212ENST00000607272 LMOD2Q6P5Q4 547 aa14.77□□□□□ -0.04
MSH6-212ENST00000607272 CKAP2LQ8IYA6 745 aa14.77□□□□□ -0.04
MSH6-212ENST00000607272 ZSCAN25Q6NSZ9 544 aa14.77□□□□□ -0.05
MSH6-212ENST00000607272 LEO1Q8WVC0 666 aaPredicted RBP14.77□□□□□ -0.05
MSH6-212ENST00000607272 C9orf78Q9NZ63 289 aaPredicted RBP14.77□□□□□ -0.05
MSH6-212ENST00000607272 DTNBO60941 627 aa14.76□□□□□ -0.05
MSH6-212ENST00000607272 AACSQ86V21 672 aa14.76□□□□□ -0.05
MSH6-212ENST00000607272 CHD2O14647 1828 aaKnown RBP14.76□□□□□ -0.05
MSH6-212ENST00000607272 DIP2BQ9P265 1576 aa14.76□□□□□ -0.05
MSH6-212ENST00000607272 ADCY9O60503 1353 aa14.76□□□□□ -0.05
MSH6-212ENST00000607272 RPS6KB1P23443 525 aa14.76□□□□□ -0.05
MSH6-212ENST00000607272 ZNF165P49910 485 aa14.76□□□□□ -0.05
MSH6-212ENST00000607272 NMIQ13287 307 aaPredicted RBP14.76□□□□□ -0.05
MSH6-212ENST00000607272 FAM173BQ6P4H8 233 aa14.76□□□□□ -0.05
MSH6-212ENST00000607272 DDX54Q8TDD1 881 aaKnown RBP14.76□□□□□ -0.05
MSH6-212ENST00000607272 OGFRQ9NZT2 677 aa14.76□□□□□ -0.05
MSH6-212ENST00000607272 HMG20BQ9P0W2 317 aa14.76□□□□□ -0.05
MSH6-212ENST00000607272 GIGYF1O75420 1035 aaPredicted RBP14.75□□□□□ -0.05
MSH6-212ENST00000607272 TNNT1P13805 278 aa14.75□□□□□ -0.05
MSH6-212ENST00000607272 U2AF2P26368 475 aaKnown RBP eCLIP14.75□□□□□ -0.05
MSH6-212ENST00000607272 CDC25BP30305 580 aa14.75□□□□□ -0.05
MSH6-212ENST00000607272 NCBP1Q09161 790 aaKnown RBP14.75□□□□□ -0.05
MSH6-212ENST00000607272 TSGA10IPQ3SY00 556 aa14.75□□□□□ -0.05
MSH6-212ENST00000607272 FAM227BQ96M60 508 aa14.75□□□□□ -0.05
MSH6-212ENST00000607272 C16orf45Q96MC5 204 aaPredicted RBP14.75□□□□□ -0.05
MSH6-212ENST00000607272 TFIP11Q9UBB9 837 aaKnown RBP14.75□□□□□ -0.05
MSH6-212ENST00000607272 DBF4Q9UBU7 674 aaPredicted RBP14.75□□□□□ -0.05
MSH6-212ENST00000607272 LTKP29376 864 aa14.74□□□□□ -0.05
MSH6-212ENST00000607272 LRMPQ12912 555 aa14.74□□□□□ -0.05
MSH6-212ENST00000607272 LARP1Q6PKG0 1096 aaKnown RBP14.74□□□□□ -0.05
MSH6-212ENST00000607272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms