RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 PANK2Q9BZ23 570 aa19.25■□□□□ 0.67
CTSA-214ENST00000606788 TIMM10P62072 90 aa19.25■□□□□ 0.67
CTSA-214ENST00000606788 BAG4O95429 457 aaKnown RBP19.24■□□□□ 0.67
CTSA-214ENST00000606788 ACSBG1Q96GR2 724 aa19.24■□□□□ 0.67
CTSA-214ENST00000606788 LSG1Q9H089 658 aaKnown RBP19.24■□□□□ 0.67
CTSA-214ENST00000606788 DBNLQ9UJU6 430 aaKnown RBP19.24■□□□□ 0.67
CTSA-214ENST00000606788 SNX14Q9Y5W7 946 aa19.24■□□□□ 0.67
CTSA-214ENST00000606788 ADCK5Q3MIX3 580 aa19.24■□□□□ 0.67
CTSA-214ENST00000606788 FAM89AQ96GI7 184 aa19.24■□□□□ 0.67
CTSA-214ENST00000606788 A0A0D9SFI3 127 aa19.23■□□□□ 0.67
CTSA-214ENST00000606788 DDX11L8A8MPP1 907 aa19.23■□□□□ 0.67
CTSA-214ENST00000606788 CASTP20810 708 aaKnown RBP19.23■□□□□ 0.67
CTSA-214ENST00000606788 DDX46Q7L014 1031 aaKnown RBP19.23■□□□□ 0.67
CTSA-214ENST00000606788 CIZ1Q9ULV3 898 aaPredicted RBP19.23■□□□□ 0.67
CTSA-214ENST00000606788 SIPA1L3O60292 1781 aaPredicted RBP19.23■□□□□ 0.67
CTSA-214ENST00000606788 LRRC24Q50LG9 513 aa19.23■□□□□ 0.67
CTSA-214ENST00000606788 CCDC129Q6ZRS4 1044 aa19.23■□□□□ 0.67
CTSA-214ENST00000606788 PUS3Q9BZE2 481 aaKnown RBP19.23■□□□□ 0.67
CTSA-214ENST00000606788 HDAC5Q9UQL6 1122 aa19.23■□□□□ 0.67
CTSA-214ENST00000606788 TAF6LQ9Y6J9 622 aa19.23■□□□□ 0.67
CTSA-214ENST00000606788 SEC62Q99442 399 aaKnown RBP19.22■□□□□ 0.67
CTSA-214ENST00000606788 HSPA4P34932 840 aa19.22■□□□□ 0.67
CTSA-214ENST00000606788 ZDHHC9Q9Y397 364 aa19.22■□□□□ 0.67
CTSA-214ENST00000606788 UTYO14607 1347 aa19.22■□□□□ 0.67
CTSA-214ENST00000606788 AOX1Q06278 1338 aa19.22■□□□□ 0.67
CTSA-214ENST00000606788 TTC41PQ6P2S7 1318 aa19.22■□□□□ 0.67
CTSA-214ENST00000606788 ERVV-2B6SEH9 535 aa19.21■□□□□ 0.67
CTSA-214ENST00000606788 JAKMIP1Q96N16 626 aaKnown RBP19.21■□□□□ 0.67
CTSA-214ENST00000606788 GDPD2Q9HCC8 539 aa19.21■□□□□ 0.67
CTSA-214ENST00000606788 CWC25Q9NXE8 425 aaPredicted RBP19.21■□□□□ 0.67
CTSA-214ENST00000606788 DDX49Q9Y6V7 483 aaKnown RBP19.21■□□□□ 0.67
CTSA-214ENST00000606788 RAD50Q92878 1312 aa19.21■□□□□ 0.67
CTSA-214ENST00000606788 EIF5BO60841 1220 aaKnown RBP19.21■□□□□ 0.67
CTSA-214ENST00000606788 PRPF40AO75400 957 aaKnown RBP19.21■□□□□ 0.67
CTSA-214ENST00000606788 RFX5P48382 616 aaPredicted RBP19.2■□□□□ 0.66
CTSA-214ENST00000606788 TNNI3KQ59H18 835 aa19.2■□□□□ 0.66
CTSA-214ENST00000606788 ZNF589Q86UQ0 364 aaPredicted RBP19.2■□□□□ 0.66
CTSA-214ENST00000606788 FPGT-TNNI3KV9GXZ4 949 aa19.2■□□□□ 0.66
CTSA-214ENST00000606788 GOLGA6L3A6NEY3 463 aa19.19■□□□□ 0.66
CTSA-214ENST00000606788 AK2P54819 239 aa19.19■□□□□ 0.66
CTSA-214ENST00000606788 EVI5LQ96CN4 794 aa19.19■□□□□ 0.66
CTSA-214ENST00000606788 TBC1D2BQ9UPU7 963 aa19.19■□□□□ 0.66
CTSA-214ENST00000606788 SNRKQ9NRH2 765 aa19.19■□□□□ 0.66
CTSA-214ENST00000606788 LARGE1O95461 756 aa19.19■□□□□ 0.66
CTSA-214ENST00000606788 ATG3Q9NT62 314 aa19.19■□□□□ 0.66
CTSA-214ENST00000606788 PRIM1P49642 420 aaKnown RBP19.18■□□□□ 0.66
CTSA-214ENST00000606788 HLFQ16534 295 aa19.18■□□□□ 0.66
CTSA-214ENST00000606788 FOXO4P98177 505 aa19.18■□□□□ 0.66
CTSA-214ENST00000606788 RBM8AQ9Y5S9 174 aaKnown RBP19.18■□□□□ 0.66
CTSA-214ENST00000606788 RBM27Q9P2N5 1060 aaKnown RBP19.17■□□□□ 0.66
CTSA-214ENST00000606788 CRYBG1Q9Y4K1 1723 aa19.17■□□□□ 0.66
CTSA-214ENST00000606788 GOLGA6L22H0YM25 854 aa19.17■□□□□ 0.66
CTSA-214ENST00000606788 CASP7P55210 303 aa19.17■□□□□ 0.66
CTSA-214ENST00000606788 NECAB1Q8N987 351 aa19.17■□□□□ 0.66
CTSA-214ENST00000606788 KCNQ4P56696 695 aa19.16■□□□□ 0.66
CTSA-214ENST00000606788 GAS2L3Q86XJ1 694 aa19.16■□□□□ 0.66
CTSA-214ENST00000606788 RUFY2Q8WXA3 655 aa19.16■□□□□ 0.66
CTSA-214ENST00000606788 XRCC6P12956 609 aaKnown RBP eCLIP19.16■□□□□ 0.66
CTSA-214ENST00000606788 NUCB2P80303 420 aa19.16■□□□□ 0.66
CTSA-214ENST00000606788 CAVIN1Q6NZI2 390 aaKnown RBP19.16■□□□□ 0.66
CTSA-214ENST00000606788 SLC4A9Q96Q91 983 aa19.16■□□□□ 0.66
CTSA-214ENST00000606788 COPRSQ9NQ92 184 aa19.16■□□□□ 0.66
CTSA-214ENST00000606788 GOLIM4O00461 696 aa19.16■□□□□ 0.66
CTSA-214ENST00000606788 HSP90AB3PQ58FF7 597 aa19.16■□□□□ 0.66
CTSA-214ENST00000606788 CCDC83Q8IWF9 413 aa19.15■□□□□ 0.66
CTSA-214ENST00000606788 EXOC5O00471 708 aa19.15■□□□□ 0.66
CTSA-214ENST00000606788 PPFIA3O75145 1194 aa19.15■□□□□ 0.66
CTSA-214ENST00000606788 RUFY3Q7L099 469 aa19.15■□□□□ 0.66
CTSA-214ENST00000606788 ZBTB1Q9Y2K1 713 aa19.15■□□□□ 0.66
CTSA-214ENST00000606788 N4BP2Q86UW6 1770 aaPredicted RBP19.14■□□□□ 0.66
CTSA-214ENST00000606788 H7C1W4 665 aa19.14■□□□□ 0.66
CTSA-214ENST00000606788 STK3Q13188 491 aa19.14■□□□□ 0.65
CTSA-214ENST00000606788 TAF7LQ5H9L4 462 aa19.14■□□□□ 0.65
CTSA-214ENST00000606788 CCDC171Q6TFL3 1326 aa19.14■□□□□ 0.65
CTSA-214ENST00000606788 USP42Q9H9J4 1324 aaKnown RBP19.14■□□□□ 0.65
CTSA-214ENST00000606788 ANAPC15P60006 121 aa19.14■□□□□ 0.65
CTSA-214ENST00000606788 NKX1-1Q15270 411 aaPredicted RBP19.14■□□□□ 0.65
CTSA-214ENST00000606788 SMIM5Q71RC9 77 aa19.14■□□□□ 0.65
CTSA-214ENST00000606788 ADAMTS7Q9UKP4 1686 aa19.13■□□□□ 0.65
CTSA-214ENST00000606788 LRRC2Q9BYS8 371 aa19.13■□□□□ 0.65
CTSA-214ENST00000606788 NSFL1CQ9UNZ2 370 aaKnown RBP19.13■□□□□ 0.65
CTSA-214ENST00000606788 FKBP4Q02790 459 aaKnown RBP eCLIP19.13■□□□□ 0.65
CTSA-214ENST00000606788 RABL6Q3YEC7 729 aaPredicted RBP19.12■□□□□ 0.65
CTSA-214ENST00000606788 CREB3L3Q68CJ9 461 aa19.12■□□□□ 0.65
CTSA-214ENST00000606788 KIF6Q6ZMV9 814 aa19.12■□□□□ 0.65
CTSA-214ENST00000606788 ATG9AQ7Z3C6 839 aa19.12■□□□□ 0.65
CTSA-214ENST00000606788 PDRG1Q9NUG6 133 aa19.12■□□□□ 0.65
CTSA-214ENST00000606788 PI16Q6UXB8 463 aa19.11■□□□□ 0.65
CTSA-214ENST00000606788 CWC22Q9HCG8 908 aaKnown RBP19.11■□□□□ 0.65
CTSA-214ENST00000606788 MRC1P22897 1456 aa19.11■□□□□ 0.65
CTSA-214ENST00000606788 ADORA1P30542 326 aa19.11■□□□□ 0.65
CTSA-214ENST00000606788 TUBGCP6Q96RT7 1819 aa19.11■□□□□ 0.65
CTSA-214ENST00000606788 STARD3NLO95772 234 aa19.11■□□□□ 0.65
CTSA-214ENST00000606788 CYP2E1P05181 493 aaPredicted RBP19.11■□□□□ 0.65
CTSA-214ENST00000606788 CCDC57Q2TAC2 916 aa19.11■□□□□ 0.65
CTSA-214ENST00000606788 GORABQ5T7V8 394 aa19.11■□□□□ 0.65
CTSA-214ENST00000606788 AFDNP55196 1824 aaKnown RBP19.1■□□□□ 0.65
CTSA-214ENST00000606788 A0A0G2JLW4 131 aa19.1■□□□□ 0.65
CTSA-214ENST00000606788 TAOK2Q9UL54 1235 aa19.1■□□□□ 0.65
CTSA-214ENST00000606788 ZKSCAN1P17029 563 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms