RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 ZBTB38Q8NAP3 1195 aaPredicted RBP9.49□□□□□ -0.89
CUX2P1-201ENST00000606426 TRMT112Q9UI30 125 aaKnown RBP9.49□□□□□ -0.89
CUX2P1-201ENST00000606426 UBN2Q6ZU65 1347 aa9.49□□□□□ -0.89
CUX2P1-201ENST00000606426 C10orf71Q711Q0 1435 aa9.48□□□□□ -0.89
CUX2P1-201ENST00000606426 NEURL1BA8MQ27 555 aa9.48□□□□□ -0.89
CUX2P1-201ENST00000606426 BCAR3O75815 825 aa9.48□□□□□ -0.89
CUX2P1-201ENST00000606426 NTSR2O95665 410 aa9.48□□□□□ -0.89
CUX2P1-201ENST00000606426 PCCAP05165 728 aaPredicted RBP9.48□□□□□ -0.89
CUX2P1-201ENST00000606426 BEND3Q5T5X7 828 aa9.48□□□□□ -0.89
CUX2P1-201ENST00000606426 SLC4A10Q6U841 1118 aa9.48□□□□□ -0.89
CUX2P1-201ENST00000606426 ATF7IPQ6VMQ6 1270 aa9.48□□□□□ -0.89
CUX2P1-201ENST00000606426 KLHL34Q8N239 644 aa9.48□□□□□ -0.89
CUX2P1-201ENST00000606426 FRAT1Q92837 279 aaPredicted RBP9.48□□□□□ -0.89
CUX2P1-201ENST00000606426 FHDC1Q9C0D6 1143 aaPredicted RBP9.48□□□□□ -0.89
CUX2P1-201ENST00000606426 SRCIN1Q9C0H9 1055 aa9.48□□□□□ -0.89
CUX2P1-201ENST00000606426 HDAC5Q9UQL6 1122 aa9.48□□□□□ -0.89
CUX2P1-201ENST00000606426 RIC1Q4ADV7 1423 aa9.48□□□□□ -0.89
CUX2P1-201ENST00000606426 FAM177BA6PVY3 158 aa9.47□□□□□ -0.89
CUX2P1-201ENST00000606426 F6X3S4 739 aa9.47□□□□□ -0.89
CUX2P1-201ENST00000606426 IGKV5-2P06315 115 aa9.47□□□□□ -0.89
CUX2P1-201ENST00000606426 GCKRQ14397 625 aa9.47□□□□□ -0.89
CUX2P1-201ENST00000606426 SLC10A5Q5PT55 438 aa9.47□□□□□ -0.89
CUX2P1-201ENST00000606426 NLRP3Q96P20 1036 aa9.47□□□□□ -0.89
CUX2P1-201ENST00000606426 SYT17Q9BSW7 474 aa9.47□□□□□ -0.89
CUX2P1-201ENST00000606426 H0YIN7 160 aa9.46□□□□□ -0.9
CUX2P1-201ENST00000606426 ERFEQ4G0M1 354 aa9.46□□□□□ -0.9
CUX2P1-201ENST00000606426 NUTM1Q86Y26 1132 aa9.46□□□□□ -0.9
CUX2P1-201ENST00000606426 FTSJ3Q8IY81 847 aaKnown RBP9.46□□□□□ -0.9
CUX2P1-201ENST00000606426 C9orf78Q9NZ63 289 aaPredicted RBP9.46□□□□□ -0.9
CUX2P1-201ENST00000606426 NUP98P52948 1817 aa9.46□□□□□ -0.9
CUX2P1-201ENST00000606426 CDHR2Q9BYE9 1310 aa9.46□□□□□ -0.9
CUX2P1-201ENST00000606426 NRXN2Q9P2S2 1712 aa9.45□□□□□ -0.9
CUX2P1-201ENST00000606426 ARFGEF2Q9Y6D5 1785 aa9.45□□□□□ -0.9
CUX2P1-201ENST00000606426 KLRG2A4D1S0 409 aaPredicted RBP9.45□□□□□ -0.9
CUX2P1-201ENST00000606426 DCAF8L1A6NGE4 600 aa9.45□□□□□ -0.9
CUX2P1-201ENST00000606426 H7C1W4 665 aa9.45□□□□□ -0.9
CUX2P1-201ENST00000606426 IRS4O14654 1257 aaPredicted RBP9.45□□□□□ -0.9
CUX2P1-201ENST00000606426 TRIM27P14373 513 aa9.45□□□□□ -0.9
CUX2P1-201ENST00000606426 CWF19L2Q2TBE0 894 aaKnown RBP9.45□□□□□ -0.9
CUX2P1-201ENST00000606426 INTS3Q68E01 1043 aaKnown RBP9.45□□□□□ -0.9
CUX2P1-201ENST00000606426 DZIP1LQ8IYY4 767 aaKnown RBP9.45□□□□□ -0.9
CUX2P1-201ENST00000606426 FAM89AQ96GI7 184 aa9.45□□□□□ -0.9
CUX2P1-201ENST00000606426 MASTLQ96GX5 879 aa9.45□□□□□ -0.9
CUX2P1-201ENST00000606426 CHMP4BQ9H444 224 aaKnown RBP9.45□□□□□ -0.9
CUX2P1-201ENST00000606426 ABCC4O15439 1325 aa9.45□□□□□ -0.9
CUX2P1-201ENST00000606426 GRM8O00222 908 aa9.44□□□□□ -0.9
CUX2P1-201ENST00000606426 PDE8AO60658 829 aa9.44□□□□□ -0.9
CUX2P1-201ENST00000606426 NPR1P16066 1061 aa9.44□□□□□ -0.9
CUX2P1-201ENST00000606426 ALDH1B1P30837 517 aa9.44□□□□□ -0.9
CUX2P1-201ENST00000606426 CRY2Q49AN0 593 aa9.44□□□□□ -0.9
CUX2P1-201ENST00000606426 STYK1Q6J9G0 422 aa9.44□□□□□ -0.9
CUX2P1-201ENST00000606426 C2CD5Q86YS7 1000 aa9.44□□□□□ -0.9
CUX2P1-201ENST00000606426 RPGRQ92834 1020 aaKnown RBP9.44□□□□□ -0.9
CUX2P1-201ENST00000606426 CNKSR1Q969H4 720 aa9.44□□□□□ -0.9
CUX2P1-201ENST00000606426 RBM17Q96I25 401 aaKnown RBP9.44□□□□□ -0.9
CUX2P1-201ENST00000606426 PLA2G12BQ9BX93 195 aa9.44□□□□□ -0.9
CUX2P1-201ENST00000606426 PIM2Q9P1W9 311 aa9.44□□□□□ -0.9
CUX2P1-201ENST00000606426 ANKRD36CQ5JPF3 1778 aa9.44□□□□□ -0.9
CUX2P1-201ENST00000606426 ABCC12Q96J65 1359 aa9.43□□□□□ -0.9
CUX2P1-201ENST00000606426 UTYO14607 1347 aa9.43□□□□□ -0.9
CUX2P1-201ENST00000606426 GNAI3P08754 354 aa9.43□□□□□ -0.9
CUX2P1-201ENST00000606426 SRGNP10124 158 aa9.43□□□□□ -0.9
CUX2P1-201ENST00000606426 DPEP1P16444 411 aa9.43□□□□□ -0.9
CUX2P1-201ENST00000606426 PDE3AQ14432 1141 aa9.43□□□□□ -0.9
CUX2P1-201ENST00000606426 SF3B3Q15393 1217 aaKnown RBP9.43□□□□□ -0.9
CUX2P1-201ENST00000606426 CCDC152Q4G0S7 254 aa9.43□□□□□ -0.9
CUX2P1-201ENST00000606426 UBE3BQ7Z3V4 1068 aa9.43□□□□□ -0.9
CUX2P1-201ENST00000606426 SRCAPQ6ZRS2 3230 aa9.43□□□□□ -0.9
CUX2P1-201ENST00000606426 A0A0G2JLW4 131 aa9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 HCLS1P14317 486 aaPredicted RBP9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 HOXA10P31260 410 aaPredicted RBP9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 CASP7P55210 303 aa9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 DALRD3Q5D0E6 543 aaKnown RBP9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 SOGA3Q5TF21 947 aa9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 DDX46Q7L014 1031 aaKnown RBP9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 CCDC24Q8N4L8 307 aa9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 TTLL6Q8N841 843 aa9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 NLGN2Q8NFZ4 835 aa9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 ZNF622Q969S3 477 aaKnown RBP eCLIP9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 CLUAP1Q96AJ1 413 aa9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 CRAMP1Q96RY5 1269 aa9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 TMX4Q9H1E5 349 aaPredicted RBP9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 KIF13BQ9NQT8 1826 aa9.42□□□□□ -0.9
CUX2P1-201ENST00000606426 AFDNP55196 1824 aaKnown RBP9.41□□□□□ -0.9
CUX2P1-201ENST00000606426 UBTFL1P0CB47 393 aaPredicted RBP9.41□□□□□ -0.9
CUX2P1-201ENST00000606426 CHRNA5P30532 468 aa9.41□□□□□ -0.9
CUX2P1-201ENST00000606426 CTSWP56202 376 aa9.41□□□□□ -0.9
CUX2P1-201ENST00000606426 GRIPAP1Q4V328 841 aa9.41□□□□□ -0.9
CUX2P1-201ENST00000606426 RTL5Q5HYW3 569 aaPredicted RBP9.41□□□□□ -0.9
CUX2P1-201ENST00000606426 TMC4Q7Z404 712 aa9.41□□□□□ -0.9
CUX2P1-201ENST00000606426 USP44Q9H0E7 712 aa9.41□□□□□ -0.9
CUX2P1-201ENST00000606426 GRIN3BO60391 1043 aa9.4□□□□□ -0.9
CUX2P1-201ENST00000606426 BBOX1O75936 387 aa9.4□□□□□ -0.9
CUX2P1-201ENST00000606426 NBPF7P0C2Y1 421 aaPredicted RBP9.4□□□□□ -0.9
CUX2P1-201ENST00000606426 KCNA3P22001 575 aa9.4□□□□□ -0.9
CUX2P1-201ENST00000606426 RRP1P56182 461 aaKnown RBP9.4□□□□□ -0.9
CUX2P1-201ENST00000606426 GRAPQ13588 217 aa9.4□□□□□ -0.9
CUX2P1-201ENST00000606426 CC2D2BQ6DHV5 1058 aa9.4□□□□□ -0.9
CUX2P1-201ENST00000606426 ITPRIPQ8IWB1 547 aa9.4□□□□□ -0.9
CUX2P1-201ENST00000606426 SYNE4Q8N205 404 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms