RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 VMP1Q96GC9 406 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 CENPOQ9BU64 300 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 TBC1D2Q9BYX2 928 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 KNSTRNQ9Y448 316 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 PPFIA2O75334 1257 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 MAGEA8P43361 318 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 COL19A1Q14993 1142 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 CCDC144BQ3MJ40 725 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 SOGA3Q5TF21 947 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 TAX1BP1Q86VP1 789 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 TDRD7Q8NHU6 1098 aaKnown RBP6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 KIF2CQ99661 725 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 TCEAL9Q9UHQ7 104 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 NOL7Q9UMY1 257 aaKnown RBP6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 PCDHGA4Q9Y5G9 962 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 CAMSAP1Q5T5Y3 1602 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 IL4RP24394 825 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 SUGP1Q8IWZ8 645 aaKnown RBP6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 TMOD4Q9NZQ9 345 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 TBX22Q9Y458 520 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 CHD2O14647 1828 aaKnown RBP6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 GUCY2CP25092 1073 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 LMNTD2Q8IXW0 634 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 SAMD3Q8N6K7 520 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 TEX13AQ9BXU3 409 aaPredicted RBP6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 BRMS1Q9HCU9 246 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 GINM1Q9NU53 330 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 HDAC9Q9UKV0 1011 aa6.94□□□□□ -1.3
COL4A3BP-207ENST00000604926 PTPRGP23470 1445 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 ANKRD18BA2A2Z9 1011 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 LDHAP00338 332 aaKnown RBP6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 XPCQ01831 940 aaPredicted RBP6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 TAGLNQ01995 201 aaKnown RBP6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 CCDC93Q567U6 631 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 GJC2Q5T442 439 aaPredicted RBP6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 C9orf131Q5VYM1 1079 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 ALKBH2Q6NS38 261 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 CCDC174Q6PII3 467 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 SLC26A8Q96RN1 970 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 AS3MTQ9HBK9 375 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 CHST12Q9NRB3 414 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 ATF5Q9Y2D1 282 aaPredicted RBP6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 N6AMT1Q9Y5N5 214 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 TIAM1Q13009 1591 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 PRSS47A8MTI9 375 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 SIM2Q14190 667 aaPredicted RBP6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 KLHL10Q6JEL2 608 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 PLPP6Q8IY26 295 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 JDP2Q8WYK2 163 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 BCL2L13Q9BXK5 485 aa6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 DMGDHQ9UI17 866 aaKnown RBP6.93□□□□□ -1.3
COL4A3BP-207ENST00000604926 STIP1P31948 543 aaKnown RBP6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 MYSM1Q5VVJ2 828 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 C17orf50Q8WW18 174 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 PDGFDQ9GZP0 370 aaPredicted RBP6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 TRMT1Q9NXH9 659 aaKnown RBP6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 COL4A3BPQ9Y5P4 624 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 A2ML1A8K2U0 1454 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 PLCH2O75038 1416 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 SLC27A2O14975 620 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 TRIM66O15016 1216 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 SLC4A2P04920 1241 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 CTR9Q6PD62 1173 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 KCNV1Q6PIU1 500 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 CCDC73Q6ZRK6 1079 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 RELL1Q8IUW5 271 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 RAVER1Q8IY67 606 aaKnown RBP6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 CEP89Q96ST8 783 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 KIF3AQ9Y496 699 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 U3KPZ7 1027 aaPredicted RBP6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 DENND4BO75064 1496 aaPredicted RBP6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 XRN1Q8IZH2 1706 aaKnown RBP6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 RECKO95980 971 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 SAPCD2Q86UD0 394 aa6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 PRPF38AQ8NAV1 312 aaKnown RBP6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 TSR2Q969E8 191 aaKnown RBP6.92□□□□□ -1.3
COL4A3BP-207ENST00000604926 CCDC66A2RUB6 948 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 GOLGA6L6A8MZA4 724 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 RBP3P10745 1247 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 ENPP1P22413 925 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 POLA2Q14181 598 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 ANKRD13DQ6ZTN6 518 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 NDUFAF2Q8N183 169 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 CHMP7Q8WUX9 453 aaPredicted RBP6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 TEKT1Q969V4 418 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 MPP4Q96JB8 637 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 EPAS1Q99814 870 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 TBC1D2BQ9UPU7 963 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 FYCO1Q9BQS8 1478 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 ARHGAP31Q2M1Z3 1444 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 TRAPPC8Q9Y2L5 1435 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 DUOX2Q9NRD8 1548 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 NLRP1Q9C000 1473 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 SMARCA1P28370 1054 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 SEPT2Q15019 361 aa6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 ZNF771Q7L3S4 317 aaPredicted RBP6.91□□□□□ -1.3
COL4A3BP-207ENST00000604926 NAP1L4Q99733 375 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms