RNA–Protein interactions for RNA: ENST00000604440.5

SH3D19-212, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-212ENST00000604440 AKAP12Q02952 1782 aa12.28□□□□□ -0.44
SH3D19-212ENST00000604440 UNC93B1Q9H1C4 597 aa12.28□□□□□ -0.44
SH3D19-212ENST00000604440 USP19O94966 1318 aa12.28□□□□□ -0.44
SH3D19-212ENST00000604440 COL5A2P05997 1499 aaPredicted RBP12.27□□□□□ -0.44
SH3D19-212ENST00000604440 HSPA5P11021 654 aaKnown RBP12.27□□□□□ -0.45
SH3D19-212ENST00000604440 MTMR2Q13614 643 aa12.27□□□□□ -0.45
SH3D19-212ENST00000604440 LCE2CQ5TA81 110 aa12.27□□□□□ -0.45
SH3D19-212ENST00000604440 PRR7Q8TB68 274 aa12.27□□□□□ -0.45
SH3D19-212ENST00000604440 KIFC2Q96AC6 838 aa12.27□□□□□ -0.45
SH3D19-212ENST00000604440 POLR3GLQ9BT43 218 aa12.27□□□□□ -0.45
SH3D19-212ENST00000604440 SPON1Q9HCB6 807 aa12.27□□□□□ -0.45
SH3D19-212ENST00000604440 EVA1BQ9NVM1 165 aa12.27□□□□□ -0.45
SH3D19-212ENST00000604440 OVOS2A0A0G2JMS6 1433 aa12.27□□□□□ -0.45
SH3D19-212ENST00000604440 OVOS2A0A0J9YW53 1432 aa12.27□□□□□ -0.45
SH3D19-212ENST00000604440 OVOS2Q6IE36 1432 aa12.27□□□□□ -0.45
SH3D19-212ENST00000604440 KCNQ2O43526 872 aa12.26□□□□□ -0.45
SH3D19-212ENST00000604440 EIF4G2P78344 907 aaKnown RBP eCLIP12.26□□□□□ -0.45
SH3D19-212ENST00000604440 TMF1P82094 1093 aa12.26□□□□□ -0.45
SH3D19-212ENST00000604440 NBPF14Q5TI25 921 aa12.26□□□□□ -0.45
SH3D19-212ENST00000604440 DESI1Q6ICB0 168 aa12.26□□□□□ -0.45
SH3D19-212ENST00000604440 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
SH3D19-212ENST00000604440 SLC12A5Q9H2X9 1139 aa12.26□□□□□ -0.45
SH3D19-212ENST00000604440 BCL9O00512 1426 aa12.26□□□□□ -0.45
SH3D19-212ENST00000604440 USP6P35125 1406 aa12.26□□□□□ -0.45
SH3D19-212ENST00000604440 COL18A1P39060 1754 aa12.25□□□□□ -0.45
SH3D19-212ENST00000604440 CHRNA2Q15822 529 aa12.25□□□□□ -0.45
SH3D19-212ENST00000604440 THRAP3Q9Y2W1 955 aaKnown RBP12.25□□□□□ -0.45
SH3D19-212ENST00000604440 SPDYE5A6NIY4 337 aa12.24□□□□□ -0.45
SH3D19-212ENST00000604440 SLIT3O75094 1523 aa12.24□□□□□ -0.45
SH3D19-212ENST00000604440 KCNH2Q12809 1159 aa12.24□□□□□ -0.45
SH3D19-212ENST00000604440 GOLGB1Q14789 3259 aaKnown RBP12.24□□□□□ -0.45
SH3D19-212ENST00000604440 MON2Q7Z3U7 1717 aa12.24□□□□□ -0.45
SH3D19-212ENST00000604440 PARP9Q8IXQ6 854 aa12.24□□□□□ -0.45
SH3D19-212ENST00000604440 TCP11L2Q8N4U5 519 aa12.24□□□□□ -0.45
SH3D19-212ENST00000604440 CD163L1Q9NR16 1453 aa12.24□□□□□ -0.45
SH3D19-212ENST00000604440 STRN4Q9NRL3 753 aa12.24□□□□□ -0.45
SH3D19-212ENST00000604440 CEP350Q5VT06 3117 aa12.24□□□□□ -0.45
SH3D19-212ENST00000604440 PIK3C2AO00443 1686 aa12.23□□□□□ -0.45
SH3D19-212ENST00000604440 CRB1P82279 1406 aa12.23□□□□□ -0.45
SH3D19-212ENST00000604440 KTN1Q86UP2 1357 aaKnown RBP12.23□□□□□ -0.45
SH3D19-212ENST00000604440 TERTO14746 1132 aaKnown RBP12.23□□□□□ -0.45
SH3D19-212ENST00000604440 WIPF1O43516 503 aa12.23□□□□□ -0.45
SH3D19-212ENST00000604440 GJA5P36382 358 aa12.23□□□□□ -0.45
SH3D19-212ENST00000604440 PDE3BQ13370 1112 aa12.23□□□□□ -0.45
SH3D19-212ENST00000604440 LINC01559Q495D7 138 aa12.23□□□□□ -0.45
SH3D19-212ENST00000604440 ABTB2Q8N961 1025 aa12.23□□□□□ -0.45
SH3D19-212ENST00000604440 A0A1W2PP64 1363 aa12.22□□□□□ -0.45
SH3D19-212ENST00000604440 PLSCR1O15162 318 aa12.22□□□□□ -0.45
SH3D19-212ENST00000604440 RSBN1LQ6PCB5 846 aaPredicted RBP12.22□□□□□ -0.45
SH3D19-212ENST00000604440 LARP1Q6PKG0 1096 aaKnown RBP12.22□□□□□ -0.45
SH3D19-212ENST00000604440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.22□□□□□ -0.45
SH3D19-212ENST00000604440 BAP1Q92560 729 aa12.22□□□□□ -0.45
SH3D19-212ENST00000604440 TBC1D2Q9BYX2 928 aa12.22□□□□□ -0.45
SH3D19-212ENST00000604440 TLL2Q9Y6L7 1015 aa12.22□□□□□ -0.45
SH3D19-212ENST00000604440 WASF2Q9Y6W5 498 aa12.22□□□□□ -0.45
SH3D19-212ENST00000604440 PAPPAQ13219 1627 aa12.22□□□□□ -0.45
SH3D19-212ENST00000604440 CPSF1Q10570 1443 aaKnown RBP12.21□□□□□ -0.45
SH3D19-212ENST00000604440 AATKQ6ZMQ8 1374 aa12.21□□□□□ -0.45
SH3D19-212ENST00000604440 BMP1P13497 986 aa12.21□□□□□ -0.45
SH3D19-212ENST00000604440 ZC3H6P61129 1189 aaKnown RBP12.21□□□□□ -0.45
SH3D19-212ENST00000604440 TRIM46Q7Z4K8 759 aa12.21□□□□□ -0.45
SH3D19-212ENST00000604440 HDGFL2Q7Z4V5 671 aaPredicted RBP12.21□□□□□ -0.45
SH3D19-212ENST00000604440 ZNF511Q8NB15 262 aa12.21□□□□□ -0.45
SH3D19-212ENST00000604440 PPP1R1BQ9UD71 204 aaPredicted RBP12.21□□□□□ -0.45
SH3D19-212ENST00000604440 BRD4O60885 1362 aaPredicted RBP12.2□□□□□ -0.46
SH3D19-212ENST00000604440 TTC21BQ7Z4L5 1316 aa12.2□□□□□ -0.46
SH3D19-212ENST00000604440 USP35Q9P2H5 1018 aa12.2□□□□□ -0.46
SH3D19-212ENST00000604440 COL24A1Q17RW2 1714 aa12.2□□□□□ -0.46
SH3D19-212ENST00000604440 ZBTB7CA1YPR0 619 aa12.19□□□□□ -0.46
SH3D19-212ENST00000604440 CAPN5O15484 640 aaPredicted RBP12.19□□□□□ -0.46
SH3D19-212ENST00000604440 NME9Q86XW9 330 aa12.19□□□□□ -0.46
SH3D19-212ENST00000604440 TERF2IPQ9NYB0 399 aa12.19□□□□□ -0.46
SH3D19-212ENST00000604440 NHSQ6T4R5 1651 aa12.19□□□□□ -0.46
SH3D19-212ENST00000604440 QSER1Q2KHR3 1735 aa12.18□□□□□ -0.46
SH3D19-212ENST00000604440 TRIM66O15016 1216 aa12.18□□□□□ -0.46
SH3D19-212ENST00000604440 SLC24A1O60721 1099 aa12.18□□□□□ -0.46
SH3D19-212ENST00000604440 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
SH3D19-212ENST00000604440 ZNF784Q8NCA9 323 aaPredicted RBP12.18□□□□□ -0.46
SH3D19-212ENST00000604440 PUS7Q96PZ0 661 aaKnown RBP12.18□□□□□ -0.46
SH3D19-212ENST00000604440 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
SH3D19-212ENST00000604440 CFAP99D6REC4 459 aa12.17□□□□□ -0.46
SH3D19-212ENST00000604440 EVA1CP58658 441 aa12.17□□□□□ -0.46
SH3D19-212ENST00000604440 DIXDC1Q155Q3 683 aa12.17□□□□□ -0.46
SH3D19-212ENST00000604440 NLRP13Q86W25 1043 aa12.17□□□□□ -0.46
SH3D19-212ENST00000604440 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
SH3D19-212ENST00000604440 RGPD5Q99666 1765 aa12.17□□□□□ -0.46
SH3D19-212ENST00000604440 ANKRD36BQ8N2N9 1353 aa12.17□□□□□ -0.46
SH3D19-212ENST00000604440 ABCC6O95255 1503 aa12.16□□□□□ -0.46
SH3D19-212ENST00000604440 TTC21AQ8NDW8 1320 aa12.16□□□□□ -0.46
SH3D19-212ENST00000604440 SPTLC1O15269 473 aa12.16□□□□□ -0.46
SH3D19-212ENST00000604440 LYPD8Q6UX82 237 aa12.16□□□□□ -0.46
SH3D19-212ENST00000604440 EDC4Q6P2E9 1401 aaKnown RBP12.16□□□□□ -0.46
SH3D19-212ENST00000604440 GCP02774 474 aa12.15□□□□□ -0.46
SH3D19-212ENST00000604440 VARSP26640 1264 aaKnown RBP12.15□□□□□ -0.46
SH3D19-212ENST00000604440 MPNDQ8N594 471 aa12.15□□□□□ -0.46
SH3D19-212ENST00000604440 PDGFDQ9GZP0 370 aaPredicted RBP12.15□□□□□ -0.46
SH3D19-212ENST00000604440 KIF20BQ96Q89 1820 aa12.14□□□□□ -0.47
SH3D19-212ENST00000604440 USP54Q70EL1 1684 aa12.13□□□□□ -0.47
SH3D19-212ENST00000604440 NSD3Q9BZ95 1437 aa12.13□□□□□ -0.47
SH3D19-212ENST00000604440 F12P00748 615 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms