RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 GSPT1P15170 499 aaKnown RBP7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 TPRNQ4KMQ1 711 aa7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 TTC22Q5TAA0 569 aa7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 ZNF428Q96B54 188 aa7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 ZNF830Q96NB3 372 aaPredicted RBP7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 FEZ1Q99689 392 aa7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 NUDT12Q9BQG2 462 aa7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 USP26Q9BXU7 913 aa7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 TTC12Q9H892 705 aaPredicted RBP7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 POLR3EQ9NVU0 708 aa7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 CGNQ9P2M7 1197 aaKnown RBP7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 NSFL1CQ9UNZ2 370 aaKnown RBP7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 SETBP1Q9Y6X0 1596 aa7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 FAM177BA6PVY3 158 aa7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 ADCY5O95622 1261 aa7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 U2AF2P26368 475 aaKnown RBP eCLIP7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 MCM2P49736 904 aa7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 MPNDQ8N594 471 aa7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 SPTLC3Q9NUV7 552 aa7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 PTCH1Q13635 1447 aa7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 DEPDC5O75140 1603 aa7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 CCDC66A2RUB6 948 aa7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 NRG2O14511 850 aaPredicted RBP7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 ZBTB7BO15156 539 aaPredicted RBP7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 MCCP23508 829 aa7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 FAM117AQ9C073 453 aa7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 SLC12A5Q9H2X9 1139 aa7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 ZDHHC9Q9Y397 364 aa7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 UHRF1BP1LA0JNW5 1464 aa7.76□□□□□ -1.17
SRGAP2-211ENST00000604423 SPTLC1O15269 473 aa7.75□□□□□ -1.17
SRGAP2-211ENST00000604423 GABPB1Q06547 395 aaPredicted RBP7.75□□□□□ -1.17
SRGAP2-211ENST00000604423 TRIM32Q13049 653 aa7.75□□□□□ -1.17
SRGAP2-211ENST00000604423 LAPTM4AQ15012 233 aa7.75□□□□□ -1.17
SRGAP2-211ENST00000604423 QPCTQ16769 361 aa7.75□□□□□ -1.17
SRGAP2-211ENST00000604423 CCDC183Q5T5S1 534 aa7.75□□□□□ -1.17
SRGAP2-211ENST00000604423 NAP1L2Q9ULW6 460 aaPredicted RBP7.75□□□□□ -1.17
SRGAP2-211ENST00000604423 MROH2AA6NES4 1674 aa7.75□□□□□ -1.17
SRGAP2-211ENST00000604423 GDF9O60383 454 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 RPIAP49247 311 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 PLEKHM2Q8IWE5 1019 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 C17orf53Q8N3J3 647 aaPredicted RBP7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 OGFRQ9NZT2 677 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 PIK3R4Q99570 1358 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 ANKRD26Q9UPS8 1709 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 ABCC1P33527 1531 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 NUTM2BA6NNL0 878 aaPredicted RBP7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 NUTM2EB1AL46 878 aaPredicted RBP7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 CFAP99D6REC4 459 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 ERC2O15083 957 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 BRD1O95696 1058 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 NUTM2DQ5VT03 806 aaPredicted RBP7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 NUTM2AQ8IVF1 878 aaPredicted RBP7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 ANKRD7Q92527 254 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 ARHGAP45Q92619 1136 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 CHAMP1Q96JM3 812 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 ZBTB3Q9H5J0 574 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 ADGRF5Q8IZF2 1346 aa7.74□□□□□ -1.17
SRGAP2-211ENST00000604423 HCLS1P14317 486 aaPredicted RBP7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 NEK4P51957 841 aa7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 BRPF1P55201 1214 aaPredicted RBP7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 PTCRAQ6ISU1 281 aaPredicted RBP7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 IPO4Q8TEX9 1081 aaKnown RBP7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 TMX3Q96JJ7 454 aa7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 PLEKHF1Q96S99 279 aa7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 PKD2L1Q9P0L9 805 aa7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 TRAK1Q9UPV9 953 aa7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 WDR33Q9C0J8 1336 aaKnown RBP7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 UGGT1Q9NYU2 1555 aa7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 LCE2BO14633 110 aa7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 IGSF3O75054 1194 aa7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 CLK2P49760 499 aaKnown RBP7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 FOXD4L6Q3SYB3 417 aaPredicted RBP7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 FOXD4L3Q6VB84 417 aaPredicted RBP7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 API5Q9BZZ5 524 aaKnown RBP7.73□□□□□ -1.17
SRGAP2-211ENST00000604423 ABCC4O15439 1325 aa7.72□□□□□ -1.17
SRGAP2-211ENST00000604423 KNDC1Q76NI1 1749 aa7.72□□□□□ -1.17
SRGAP2-211ENST00000604423 FAM187AA6NFU0 413 aa7.72□□□□□ -1.17
SRGAP2-211ENST00000604423 CCNYL3P0C7X3 344 aa7.72□□□□□ -1.17
SRGAP2-211ENST00000604423 SDSP20132 328 aa7.72□□□□□ -1.17
SRGAP2-211ENST00000604423 NOL8Q76FK4 1167 aaKnown RBP7.72□□□□□ -1.17
SRGAP2-211ENST00000604423 TMEM51Q9NW97 253 aa7.72□□□□□ -1.17
SRGAP2-211ENST00000604423 COL3A1P02461 1466 aaPredicted RBP7.72□□□□□ -1.17
SRGAP2-211ENST00000604423 ZFYVE16Q7Z3T8 1539 aa7.72□□□□□ -1.17
SRGAP2-211ENST00000604423 SPDYE5A6NIY4 337 aa7.71□□□□□ -1.17
SRGAP2-211ENST00000604423 CTIFO43310 598 aaKnown RBP7.71□□□□□ -1.17
SRGAP2-211ENST00000604423 SYCP1Q15431 976 aa7.71□□□□□ -1.17
SRGAP2-211ENST00000604423 SIRT2Q8IXJ6 389 aa7.71□□□□□ -1.17
SRGAP2-211ENST00000604423 KIAA1524Q8TCG1 905 aa7.71□□□□□ -1.17
SRGAP2-211ENST00000604423 INTS4Q96HW7 963 aaKnown RBP7.71□□□□□ -1.17
SRGAP2-211ENST00000604423 GDPD2Q9HCC8 539 aa7.71□□□□□ -1.17
SRGAP2-211ENST00000604423 EVC2Q86UK5 1308 aa7.71□□□□□ -1.17
SRGAP2-211ENST00000604423 NRXN1Q9ULB1 1477 aa7.71□□□□□ -1.17
SRGAP2-211ENST00000604423 LRRC7Q96NW7 1537 aa7.71□□□□□ -1.17
SRGAP2-211ENST00000604423 SPAG9O60271 1321 aaKnown RBP7.71□□□□□ -1.18
SRGAP2-211ENST00000604423 MX1P20591 662 aa7.71□□□□□ -1.18
SRGAP2-211ENST00000604423 GJA5P36382 358 aa7.71□□□□□ -1.18
SRGAP2-211ENST00000604423 PRR20EP86478 221 aa7.71□□□□□ -1.18
SRGAP2-211ENST00000604423 PRR20CP86479 221 aa7.71□□□□□ -1.18
SRGAP2-211ENST00000604423 PRR20DP86480 221 aa7.71□□□□□ -1.18
SRGAP2-211ENST00000604423 PRR20BP86481 221 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms