RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 C3orf67Q6ZVT6 689 aa21.27■■□□□ 1
TUBE1-206ENST00000603722 RBM46Q8TBY0 533 aaKnown RBP21.27■■□□□ 1
TUBE1-206ENST00000603722 DBF4Q9UBU7 674 aaPredicted RBP21.27■■□□□ 1
TUBE1-206ENST00000603722 CEP350Q5VT06 3117 aa21.27■■□□□ 1
TUBE1-206ENST00000603722 ARFGEF2Q9Y6D5 1785 aa21.26■□□□□ 0.99
TUBE1-206ENST00000603722 FKBP4Q02790 459 aaKnown RBP eCLIP21.26■□□□□ 0.99
TUBE1-206ENST00000603722 NLRP10Q86W26 655 aa21.26■□□□□ 0.99
TUBE1-206ENST00000603722 MRS2Q9HD23 443 aa21.26■□□□□ 0.99
TUBE1-206ENST00000603722 SBF1O95248 1867 aa21.26■□□□□ 0.99
TUBE1-206ENST00000603722 DPY19L2Q6NUT2 758 aa21.25■□□□□ 0.99
TUBE1-206ENST00000603722 RTKN2Q8IZC4 609 aa21.25■□□□□ 0.99
TUBE1-206ENST00000603722 ZNF277Q9NRM2 450 aaPredicted RBP21.25■□□□□ 0.99
TUBE1-206ENST00000603722 NUP98P52948 1817 aa21.25■□□□□ 0.99
TUBE1-206ENST00000603722 ELL2O00472 640 aaPredicted RBP21.24■□□□□ 0.99
TUBE1-206ENST00000603722 HOXA10P31260 410 aaPredicted RBP21.24■□□□□ 0.99
TUBE1-206ENST00000603722 TCIRG1Q13488 830 aa21.24■□□□□ 0.99
TUBE1-206ENST00000603722 RBM17Q96I25 401 aaKnown RBP21.24■□□□□ 0.99
TUBE1-206ENST00000603722 NLRP3Q96P20 1036 aa21.24■□□□□ 0.99
TUBE1-206ENST00000603722 VEGFAP15692 232 aaPredicted RBP21.23■□□□□ 0.99
TUBE1-206ENST00000603722 PLBD2Q8NHP8 589 aa21.23■□□□□ 0.99
TUBE1-206ENST00000603722 HYPKQ9NX55 129 aa21.23■□□□□ 0.99
TUBE1-206ENST00000603722 FER1L6Q2WGJ9 1857 aa21.23■□□□□ 0.99
TUBE1-206ENST00000603722 RNF123Q5XPI4 1314 aa21.23■□□□□ 0.99
TUBE1-206ENST00000603722 SLC51AQ86UW1 340 aa21.22■□□□□ 0.99
TUBE1-206ENST00000603722 ZNF428Q96B54 188 aa21.22■□□□□ 0.99
TUBE1-206ENST00000603722 TRMT112Q9UI30 125 aaKnown RBP21.22■□□□□ 0.99
TUBE1-206ENST00000603722 CACNA1SQ13698 1873 aa21.22■□□□□ 0.99
TUBE1-206ENST00000603722 SNED1Q8TER0 1413 aa21.21■□□□□ 0.99
TUBE1-206ENST00000603722 TCERG1O14776 1098 aaKnown RBP21.21■□□□□ 0.99
TUBE1-206ENST00000603722 PPEF1O14829 653 aaPredicted RBP21.21■□□□□ 0.99
TUBE1-206ENST00000603722 FSTL1Q12841 308 aa21.21■□□□□ 0.99
TUBE1-206ENST00000603722 SLC10A5Q5PT55 438 aa21.21■□□□□ 0.99
TUBE1-206ENST00000603722 ANKRD13DQ6ZTN6 518 aa21.21■□□□□ 0.99
TUBE1-206ENST00000603722 CRAMP1Q96RY5 1269 aa21.21■□□□□ 0.99
TUBE1-206ENST00000603722 DDNO94850 711 aaPredicted RBP21.2■□□□□ 0.98
TUBE1-206ENST00000603722 HCLS1P14317 486 aaPredicted RBP21.2■□□□□ 0.98
TUBE1-206ENST00000603722 APLP1P51693 650 aa21.2■□□□□ 0.98
TUBE1-206ENST00000603722 SYNE4Q8N205 404 aa21.2■□□□□ 0.98
TUBE1-206ENST00000603722 C8orf58Q8NAV2 365 aa21.2■□□□□ 0.98
TUBE1-206ENST00000603722 SH3TC1Q8TE82 1336 aa21.2■□□□□ 0.98
TUBE1-206ENST00000603722 POTECB2RU33 542 aa21.19■□□□□ 0.98
TUBE1-206ENST00000603722 IARSP41252 1262 aaKnown RBP21.19■□□□□ 0.98
TUBE1-206ENST00000603722 CCDC27Q2M243 656 aa21.19■□□□□ 0.98
TUBE1-206ENST00000603722 CC2D2BQ6DHV5 1058 aa21.19■□□□□ 0.98
TUBE1-206ENST00000603722 SMC1BQ8NDV3 1235 aa21.19■□□□□ 0.98
TUBE1-206ENST00000603722 TSR2Q969E8 191 aaKnown RBP21.19■□□□□ 0.98
TUBE1-206ENST00000603722 ATP5J2-PTCD1G3V325 749 aa21.18■□□□□ 0.98
TUBE1-206ENST00000603722 WWC1Q8IX03 1113 aa21.18■□□□□ 0.98
TUBE1-206ENST00000603722 PSMD1Q99460 953 aa21.18■□□□□ 0.98
TUBE1-206ENST00000603722 ISCA1Q9BUE6 129 aa21.18■□□□□ 0.98
TUBE1-206ENST00000603722 PHAXQ9H814 394 aaKnown RBP21.18■□□□□ 0.98
TUBE1-206ENST00000603722 ABCC4O15439 1325 aa21.18■□□□□ 0.98
TUBE1-206ENST00000603722 GOLGA2Q08379 1002 aa21.17■□□□□ 0.98
TUBE1-206ENST00000603722 ZNF541Q9H0D2 1346 aa21.17■□□□□ 0.98
TUBE1-206ENST00000603722 WDR90Q96KV7 1748 aa21.16■□□□□ 0.98
TUBE1-206ENST00000603722 TSPYL6Q8N831 410 aa21.16■□□□□ 0.98
TUBE1-206ENST00000603722 RIC3Q7Z5B4 369 aa21.15■□□□□ 0.98
TUBE1-206ENST00000603722 FAM89AQ96GI7 184 aa21.15■□□□□ 0.98
TUBE1-206ENST00000603722 ANKRD36CQ5JPF3 1778 aa21.15■□□□□ 0.98
TUBE1-206ENST00000603722 GRIPAP1Q4V328 841 aa21.14■□□□□ 0.97
TUBE1-206ENST00000603722 CCDC30Q5VVM6 783 aa21.14■□□□□ 0.97
TUBE1-206ENST00000603722 TMX4Q9H1E5 349 aaPredicted RBP21.14■□□□□ 0.97
TUBE1-206ENST00000603722 ATP6V0A2Q9Y487 856 aa21.14■□□□□ 0.97
TUBE1-206ENST00000603722 HTRA3P83110 453 aa21.13■□□□□ 0.97
TUBE1-206ENST00000603722 RTL5Q5HYW3 569 aaPredicted RBP21.13■□□□□ 0.97
TUBE1-206ENST00000603722 DDX46Q7L014 1031 aaKnown RBP21.13■□□□□ 0.97
TUBE1-206ENST00000603722 JDP2Q8WYK2 163 aa21.13■□□□□ 0.97
TUBE1-206ENST00000603722 SALL2Q9Y467 1007 aaPredicted RBP21.13■□□□□ 0.97
TUBE1-206ENST00000603722 FZD9O00144 591 aa21.12■□□□□ 0.97
TUBE1-206ENST00000603722 GRAPQ13588 217 aa21.12■□□□□ 0.97
TUBE1-206ENST00000603722 GRAPLQ8TC17 118 aaPredicted RBP21.12■□□□□ 0.97
TUBE1-206ENST00000603722 L3MBTL3Q96JM7 780 aaPredicted RBP21.12■□□□□ 0.97
TUBE1-206ENST00000603722 CHMP4AQ9BY43 222 aa21.12■□□□□ 0.97
TUBE1-206ENST00000603722 IL16Q14005 1332 aa21.11■□□□□ 0.97
TUBE1-206ENST00000603722 IQCA1LA6NCM1 817 aa21.11■□□□□ 0.97
TUBE1-206ENST00000603722 TRIM28Q13263 835 aaKnown RBP21.11■□□□□ 0.97
TUBE1-206ENST00000603722 LARGE2Q8N3Y3 721 aa21.11■□□□□ 0.97
TUBE1-206ENST00000603722 MYD88Q99836 296 aa21.11■□□□□ 0.97
TUBE1-206ENST00000603722 COL4A5P29400 1685 aa21.11■□□□□ 0.97
TUBE1-206ENST00000603722 CCDC88AQ3V6T2 1871 aa21.1■□□□□ 0.97
TUBE1-206ENST00000603722 BBOX1O75936 387 aa21.1■□□□□ 0.97
TUBE1-206ENST00000603722 NCBP3Q53F19 620 aaKnown RBP21.1■□□□□ 0.97
TUBE1-206ENST00000603722 DICER1Q9UPY3 1922 aaKnown RBP21.1■□□□□ 0.97
TUBE1-206ENST00000603722 IRS4O14654 1257 aaPredicted RBP21.09■□□□□ 0.97
TUBE1-206ENST00000603722 DDX58O95786 925 aaKnown RBP21.09■□□□□ 0.97
TUBE1-206ENST00000603722 POTEIP0CG38 1075 aa21.09■□□□□ 0.97
TUBE1-206ENST00000603722 POTEJP0CG39 1038 aa21.09■□□□□ 0.97
TUBE1-206ENST00000603722 TWISTNBQ3B726 338 aaPredicted RBP21.09■□□□□ 0.97
TUBE1-206ENST00000603722 FANCIQ9NVI1 1328 aa21.08■□□□□ 0.97
TUBE1-206ENST00000603722 PPIP5K2O43314 1243 aa21.08■□□□□ 0.97
TUBE1-206ENST00000603722 EIF6P56537 245 aaKnown RBP21.08■□□□□ 0.97
TUBE1-206ENST00000603722 AOC3Q16853 763 aa21.08■□□□□ 0.97
TUBE1-206ENST00000603722 DPP8Q6V1X1 898 aaPredicted RBP21.08■□□□□ 0.97
TUBE1-206ENST00000603722 SP8Q8IXZ3 490 aa21.08■□□□□ 0.97
TUBE1-206ENST00000603722 FAM9BQ8IZU0 186 aa21.08■□□□□ 0.97
TUBE1-206ENST00000603722 STK31Q9BXU1 1019 aa21.08■□□□□ 0.97
TUBE1-206ENST00000603722 TAF1DQ9H5J8 278 aaPredicted RBP21.08■□□□□ 0.97
TUBE1-206ENST00000603722 SF3B3Q15393 1217 aaKnown RBP21.07■□□□□ 0.96
TUBE1-206ENST00000603722 NIM1KQ8IY84 436 aa21.07■□□□□ 0.96
TUBE1-206ENST00000603722 GPC2Q8N158 579 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms