RNA–Protein interactions for RNA: ENST00000603038.1

CHCHD2P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3, humanhuman

BASIC

Gene CHCHD2P3, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2P3-201ENST00000603038 UTP14AQ9BVJ6 771 aaKnown RBP20.39■□□□□ 0.85
CHCHD2P3-201ENST00000603038 DBF4Q9UBU7 674 aaPredicted RBP20.39■□□□□ 0.85
CHCHD2P3-201ENST00000603038 IBTKQ9P2D0 1353 aaPredicted RBP20.38■□□□□ 0.85
CHCHD2P3-201ENST00000603038 LTBP3Q9NS15 1303 aa20.38■□□□□ 0.85
CHCHD2P3-201ENST00000603038 DICER1Q9UPY3 1922 aaKnown RBP20.38■□□□□ 0.85
CHCHD2P3-201ENST00000603038 TOMM70O94826 608 aa20.38■□□□□ 0.85
CHCHD2P3-201ENST00000603038 ALDH1B1P30837 517 aa20.38■□□□□ 0.85
CHCHD2P3-201ENST00000603038 SLC10A5Q5PT55 438 aa20.38■□□□□ 0.85
CHCHD2P3-201ENST00000603038 TSPYL6Q8N831 410 aa20.38■□□□□ 0.85
CHCHD2P3-201ENST00000603038 HOXA10P31260 410 aaPredicted RBP20.37■□□□□ 0.85
CHCHD2P3-201ENST00000603038 CALD1Q05682 793 aaKnown RBP20.37■□□□□ 0.85
CHCHD2P3-201ENST00000603038 CCDC93Q567U6 631 aa20.37■□□□□ 0.85
CHCHD2P3-201ENST00000603038 ANKRD13DQ6ZTN6 518 aa20.37■□□□□ 0.85
CHCHD2P3-201ENST00000603038 WWC1Q8IX03 1113 aa20.37■□□□□ 0.85
CHCHD2P3-201ENST00000603038 PLBD2Q8NHP8 589 aa20.37■□□□□ 0.85
CHCHD2P3-201ENST00000603038 TSR2Q969E8 191 aaKnown RBP20.37■□□□□ 0.85
CHCHD2P3-201ENST00000603038 PHAXQ9H814 394 aaKnown RBP20.37■□□□□ 0.85
CHCHD2P3-201ENST00000603038 CEP350Q5VT06 3117 aa20.37■□□□□ 0.85
CHCHD2P3-201ENST00000603038 POTECB2RU33 542 aa20.36■□□□□ 0.85
CHCHD2P3-201ENST00000603038 ATP5J2-PTCD1G3V325 749 aa20.36■□□□□ 0.85
CHCHD2P3-201ENST00000603038 TCERG1O14776 1098 aaKnown RBP20.36■□□□□ 0.85
CHCHD2P3-201ENST00000603038 HCLS1P14317 486 aaPredicted RBP20.36■□□□□ 0.85
CHCHD2P3-201ENST00000603038 HSP90AB3PQ58FF7 597 aa20.36■□□□□ 0.85
CHCHD2P3-201ENST00000603038 SOGA3Q5TF21 947 aa20.36■□□□□ 0.85
CHCHD2P3-201ENST00000603038 ZNF277Q9NRM2 450 aaPredicted RBP20.36■□□□□ 0.85
CHCHD2P3-201ENST00000603038 SALL2Q9Y467 1007 aaPredicted RBP20.36■□□□□ 0.85
CHCHD2P3-201ENST00000603038 ZC3H4Q9UPT8 1303 aaKnown RBP20.35■□□□□ 0.85
CHCHD2P3-201ENST00000603038 HSPA6P17066 643 aa20.35■□□□□ 0.85
CHCHD2P3-201ENST00000603038 RPGRQ92834 1020 aaKnown RBP20.35■□□□□ 0.85
CHCHD2P3-201ENST00000603038 NLRP3Q96P20 1036 aa20.35■□□□□ 0.85
CHCHD2P3-201ENST00000603038 HYPKQ9NX55 129 aa20.35■□□□□ 0.85
CHCHD2P3-201ENST00000603038 TIAM2Q8IVF5 1701 aa20.35■□□□□ 0.85
CHCHD2P3-201ENST00000603038 ANKRD36CQ5JPF3 1778 aa20.34■□□□□ 0.85
CHCHD2P3-201ENST00000603038 FKBP4Q02790 459 aaKnown RBP eCLIP20.34■□□□□ 0.85
CHCHD2P3-201ENST00000603038 CCDC27Q2M243 656 aa20.34■□□□□ 0.85
CHCHD2P3-201ENST00000603038 ISCA1Q9BUE6 129 aa20.34■□□□□ 0.85
CHCHD2P3-201ENST00000603038 TRMT112Q9UI30 125 aaKnown RBP20.34■□□□□ 0.85
CHCHD2P3-201ENST00000603038 RIC1Q4ADV7 1423 aa20.34■□□□□ 0.85
CHCHD2P3-201ENST00000603038 DDNO94850 711 aaPredicted RBP20.33■□□□□ 0.85
CHCHD2P3-201ENST00000603038 RBM17Q96I25 401 aaKnown RBP20.33■□□□□ 0.85
CHCHD2P3-201ENST00000603038 CRAMP1Q96RY5 1269 aa20.33■□□□□ 0.85
CHCHD2P3-201ENST00000603038 C16orf71Q8IYS4 520 aaPredicted RBP20.32■□□□□ 0.84
CHCHD2P3-201ENST00000603038 RTKN2Q8IZC4 609 aa20.32■□□□□ 0.84
CHCHD2P3-201ENST00000603038 RBM46Q8TBY0 533 aaKnown RBP20.32■□□□□ 0.84
CHCHD2P3-201ENST00000603038 SNED1Q8TER0 1413 aa20.32■□□□□ 0.84
CHCHD2P3-201ENST00000603038 VEGFAP15692 232 aaPredicted RBP20.31■□□□□ 0.84
CHCHD2P3-201ENST00000603038 DPY19L2Q6NUT2 758 aa20.31■□□□□ 0.84
CHCHD2P3-201ENST00000603038 FAM89AQ96GI7 184 aa20.31■□□□□ 0.84
CHCHD2P3-201ENST00000603038 TAF1P21675 1872 aa20.3■□□□□ 0.84
CHCHD2P3-201ENST00000603038 RTL5Q5HYW3 569 aaPredicted RBP20.3■□□□□ 0.84
CHCHD2P3-201ENST00000603038 FAM9BQ8IZU0 186 aa20.3■□□□□ 0.84
CHCHD2P3-201ENST00000603038 SH3TC1Q8TE82 1336 aa20.29■□□□□ 0.84
CHCHD2P3-201ENST00000603038 LAMB2P55268 1798 aa20.29■□□□□ 0.84
CHCHD2P3-201ENST00000603038 PPEF1O14829 653 aaPredicted RBP20.29■□□□□ 0.84
CHCHD2P3-201ENST00000603038 RIC3Q7Z5B4 369 aa20.29■□□□□ 0.84
CHCHD2P3-201ENST00000603038 ABCC4O15439 1325 aa20.28■□□□□ 0.84
CHCHD2P3-201ENST00000603038 IARSP41252 1262 aaKnown RBP20.28■□□□□ 0.84
CHCHD2P3-201ENST00000603038 RNF123Q5XPI4 1314 aa20.27■□□□□ 0.84
CHCHD2P3-201ENST00000603038 TRIM28Q13263 835 aaKnown RBP20.27■□□□□ 0.84
CHCHD2P3-201ENST00000603038 CCDC30Q5VVM6 783 aa20.27■□□□□ 0.84
CHCHD2P3-201ENST00000603038 JARID2Q92833 1246 aaPredicted RBP20.27■□□□□ 0.84
CHCHD2P3-201ENST00000603038 PSMD1Q99460 953 aa20.27■□□□□ 0.84
CHCHD2P3-201ENST00000603038 SPINK5Q9NQ38 1064 aaPredicted RBP20.27■□□□□ 0.84
CHCHD2P3-201ENST00000603038 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.83
CHCHD2P3-201ENST00000603038 HTRA3P83110 453 aa20.26■□□□□ 0.83
CHCHD2P3-201ENST00000603038 GOLGA2Q08379 1002 aa20.26■□□□□ 0.83
CHCHD2P3-201ENST00000603038 NCBP3Q53F19 620 aaKnown RBP20.26■□□□□ 0.83
CHCHD2P3-201ENST00000603038 CC2D2BQ6DHV5 1058 aa20.26■□□□□ 0.83
CHCHD2P3-201ENST00000603038 G2E3Q7L622 706 aa20.26■□□□□ 0.83
CHCHD2P3-201ENST00000603038 MYD88Q99836 296 aa20.26■□□□□ 0.83
CHCHD2P3-201ENST00000603038 WDR90Q96KV7 1748 aa20.26■□□□□ 0.83
CHCHD2P3-201ENST00000603038 IL16Q14005 1332 aa20.26■□□□□ 0.83
CHCHD2P3-201ENST00000603038 COL4A5P29400 1685 aa20.26■□□□□ 0.83
CHCHD2P3-201ENST00000603038 TWISTNBQ3B726 338 aaPredicted RBP20.25■□□□□ 0.83
CHCHD2P3-201ENST00000603038 ATP6V0A2Q9Y487 856 aa20.25■□□□□ 0.83
CHCHD2P3-201ENST00000603038 FZD9O00144 591 aa20.24■□□□□ 0.83
CHCHD2P3-201ENST00000603038 POTEIP0CG38 1075 aa20.24■□□□□ 0.83
CHCHD2P3-201ENST00000603038 POTEJP0CG39 1038 aa20.24■□□□□ 0.83
CHCHD2P3-201ENST00000603038 FSTL1Q12841 308 aa20.24■□□□□ 0.83
CHCHD2P3-201ENST00000603038 DDX60Q8IY21 1712 aaKnown RBP20.24■□□□□ 0.83
CHCHD2P3-201ENST00000603038 BBOX1O75936 387 aa20.23■□□□□ 0.83
CHCHD2P3-201ENST00000603038 DDX46Q7L014 1031 aaKnown RBP20.23■□□□□ 0.83
CHCHD2P3-201ENST00000603038 WDR63Q8IWG1 891 aa20.23■□□□□ 0.83
CHCHD2P3-201ENST00000603038 METTL22Q9BUU2 404 aaPredicted RBP20.23■□□□□ 0.83
CHCHD2P3-201ENST00000603038 FANCIQ9NVI1 1328 aa20.23■□□□□ 0.83
CHCHD2P3-201ENST00000603038 IRS4O14654 1257 aaPredicted RBP20.22■□□□□ 0.83
CHCHD2P3-201ENST00000603038 APLP1P51693 650 aa20.22■□□□□ 0.83
CHCHD2P3-201ENST00000603038 GRAPQ13588 217 aa20.22■□□□□ 0.83
CHCHD2P3-201ENST00000603038 SF3B3Q15393 1217 aaKnown RBP20.22■□□□□ 0.83
CHCHD2P3-201ENST00000603038 SP8Q8IXZ3 490 aa20.22■□□□□ 0.83
CHCHD2P3-201ENST00000603038 DNAJC5GQ8N7S2 189 aa20.22■□□□□ 0.83
CHCHD2P3-201ENST00000603038 SMC1BQ8NDV3 1235 aa20.22■□□□□ 0.83
CHCHD2P3-201ENST00000603038 GRAPLQ8TC17 118 aaPredicted RBP20.22■□□□□ 0.83
CHCHD2P3-201ENST00000603038 MAP3K2Q9Y2U5 619 aa20.22■□□□□ 0.83
CHCHD2P3-201ENST00000603038 COL4A1P02462 1669 aa20.22■□□□□ 0.83
CHCHD2P3-201ENST00000603038 PI4KAP2A4QPH2 592 aa20.21■□□□□ 0.83
CHCHD2P3-201ENST00000603038 VAMP4O75379 141 aa20.21■□□□□ 0.83
CHCHD2P3-201ENST00000603038 SLC4A2P04920 1241 aa20.21■□□□□ 0.83
CHCHD2P3-201ENST00000603038 EXOSC9Q06265 439 aaKnown RBP20.21■□□□□ 0.83
CHCHD2P3-201ENST00000603038 PI4KAP1Q8N8J0 262 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms