RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 NUTM1Q86Y26 1132 aa20.42■□□□□ 0.86
PPFIA3-213ENST00000602905 TRMT112Q9UI30 125 aaKnown RBP20.42■□□□□ 0.86
PPFIA3-213ENST00000602905 NTSR2O95665 410 aa20.41■□□□□ 0.86
PPFIA3-213ENST00000602905 TRIM28Q13263 835 aaKnown RBP20.41■□□□□ 0.86
PPFIA3-213ENST00000602905 ERFEQ4G0M1 354 aa20.41■□□□□ 0.86
PPFIA3-213ENST00000602905 BRCA1P38398 1863 aaKnown RBP20.41■□□□□ 0.86
PPFIA3-213ENST00000602905 ADCY9O60503 1353 aa20.4■□□□□ 0.86
PPFIA3-213ENST00000602905 CCDC191Q8NCU4 936 aa20.4■□□□□ 0.86
PPFIA3-213ENST00000602905 ZNF622Q969S3 477 aaKnown RBP eCLIP20.4■□□□□ 0.86
PPFIA3-213ENST00000602905 SMC4Q9NTJ3 1288 aa20.4■□□□□ 0.86
PPFIA3-213ENST00000602905 WWC3Q9ULE0 1092 aa20.4■□□□□ 0.86
PPFIA3-213ENST00000602905 DLEC1Q9Y238 1755 aa20.4■□□□□ 0.86
PPFIA3-213ENST00000602905 SH3TC1Q8TE82 1336 aa20.39■□□□□ 0.85
PPFIA3-213ENST00000602905 GRIN3BO60391 1043 aa20.39■□□□□ 0.85
PPFIA3-213ENST00000602905 MRPL50Q8N5N7 158 aaKnown RBP20.39■□□□□ 0.85
PPFIA3-213ENST00000602905 DNAAF4Q8WXU2 420 aa20.39■□□□□ 0.85
PPFIA3-213ENST00000602905 SSH1Q8WYL5 1049 aa20.39■□□□□ 0.85
PPFIA3-213ENST00000602905 CWC25Q9NXE8 425 aaPredicted RBP20.39■□□□□ 0.85
PPFIA3-213ENST00000602905 BCS1LQ9Y276 419 aa20.39■□□□□ 0.85
PPFIA3-213ENST00000602905 HSP90B1P14625 803 aaKnown RBP20.38■□□□□ 0.85
PPFIA3-213ENST00000602905 KCNA3P22001 575 aa20.38■□□□□ 0.85
PPFIA3-213ENST00000602905 DALRD3Q5D0E6 543 aaKnown RBP20.38■□□□□ 0.85
PPFIA3-213ENST00000602905 NLRP3Q96P20 1036 aa20.38■□□□□ 0.85
PPFIA3-213ENST00000602905 PTPRCP08575 1304 aa20.37■□□□□ 0.85
PPFIA3-213ENST00000602905 TTLL6Q8N841 843 aa20.37■□□□□ 0.85
PPFIA3-213ENST00000602905 MASTLQ96GX5 879 aa20.37■□□□□ 0.85
PPFIA3-213ENST00000602905 BCL2L13Q9BXK5 485 aa20.37■□□□□ 0.85
PPFIA3-213ENST00000602905 RIC1Q4ADV7 1423 aa20.36■□□□□ 0.85
PPFIA3-213ENST00000602905 ABCC12Q96J65 1359 aa20.36■□□□□ 0.85
PPFIA3-213ENST00000602905 SRGNP10124 158 aa20.36■□□□□ 0.85
PPFIA3-213ENST00000602905 NPR1P16066 1061 aa20.36■□□□□ 0.85
PPFIA3-213ENST00000602905 STYK1Q6J9G0 422 aa20.36■□□□□ 0.85
PPFIA3-213ENST00000602905 CNKSR1Q969H4 720 aa20.36■□□□□ 0.85
PPFIA3-213ENST00000602905 ARFGEF1Q9Y6D6 1849 aa20.36■□□□□ 0.85
PPFIA3-213ENST00000602905 COL11A2P13942 1736 aaPredicted RBP20.36■□□□□ 0.85
PPFIA3-213ENST00000602905 CACNA1SQ13698 1873 aa20.35■□□□□ 0.85
PPFIA3-213ENST00000602905 YBX3P16989 372 aaKnown RBP eCLIP20.35■□□□□ 0.85
PPFIA3-213ENST00000602905 SLC10A5Q5PT55 438 aa20.35■□□□□ 0.85
PPFIA3-213ENST00000602905 ZBTB38Q8NAP3 1195 aaPredicted RBP20.35■□□□□ 0.85
PPFIA3-213ENST00000602905 RPGRQ92834 1020 aaKnown RBP20.35■□□□□ 0.85
PPFIA3-213ENST00000602905 CHD4Q14839 1912 aa20.34■□□□□ 0.85
PPFIA3-213ENST00000602905 KLRG2A4D1S0 409 aaPredicted RBP20.34■□□□□ 0.85
PPFIA3-213ENST00000602905 LINS1Q8NG48 757 aa20.34■□□□□ 0.85
PPFIA3-213ENST00000602905 FAM89AQ96GI7 184 aa20.34■□□□□ 0.85
PPFIA3-213ENST00000602905 TNRC6CQ9HCJ0 1690 aaKnown RBP20.33■□□□□ 0.85
PPFIA3-213ENST00000602905 NEURL1BA8MQ27 555 aa20.33■□□□□ 0.85
PPFIA3-213ENST00000602905 F6X3S4 739 aa20.33■□□□□ 0.85
PPFIA3-213ENST00000602905 PCCAP05165 728 aaPredicted RBP20.33■□□□□ 0.85
PPFIA3-213ENST00000602905 ALDH1B1P30837 517 aa20.33■□□□□ 0.85
PPFIA3-213ENST00000602905 RARSP54136 660 aaKnown RBP20.33■□□□□ 0.85
PPFIA3-213ENST00000602905 RTL5Q5HYW3 569 aaPredicted RBP20.33■□□□□ 0.85
PPFIA3-213ENST00000602905 SLC4A10Q6U841 1118 aa20.33■□□□□ 0.85
PPFIA3-213ENST00000602905 IRS4O14654 1257 aaPredicted RBP20.32■□□□□ 0.84
PPFIA3-213ENST00000602905 IGKV5-2P06315 115 aa20.32■□□□□ 0.84
PPFIA3-213ENST00000602905 HCLS1P14317 486 aaPredicted RBP20.32■□□□□ 0.84
PPFIA3-213ENST00000602905 CWF19L2Q2TBE0 894 aaKnown RBP20.32■□□□□ 0.84
PPFIA3-213ENST00000602905 RBM17Q96I25 401 aaKnown RBP20.32■□□□□ 0.84
PPFIA3-213ENST00000602905 KIF16BQ96L93 1317 aa20.31■□□□□ 0.84
PPFIA3-213ENST00000602905 BRPF1P55201 1214 aaPredicted RBP20.31■□□□□ 0.84
PPFIA3-213ENST00000602905 LAMB2P55268 1798 aa20.31■□□□□ 0.84
PPFIA3-213ENST00000602905 DDX60Q8IY21 1712 aaKnown RBP20.3■□□□□ 0.84
PPFIA3-213ENST00000602905 CRY2Q49AN0 593 aa20.3■□□□□ 0.84
PPFIA3-213ENST00000602905 SYNE4Q8N205 404 aa20.3■□□□□ 0.84
PPFIA3-213ENST00000602905 API5Q9BZZ5 524 aaKnown RBP20.3■□□□□ 0.84
PPFIA3-213ENST00000602905 IPO8O15397 1037 aaKnown RBP20.29■□□□□ 0.84
PPFIA3-213ENST00000602905 ALDH1L1O75891 902 aa20.29■□□□□ 0.84
PPFIA3-213ENST00000602905 GCKRQ14397 625 aa20.29■□□□□ 0.84
PPFIA3-213ENST00000602905 BEND3Q5T5X7 828 aa20.29■□□□□ 0.84
PPFIA3-213ENST00000602905 ARHGAP27Q6ZUM4 889 aa20.29■□□□□ 0.84
PPFIA3-213ENST00000602905 YTHDC1Q96MU7 727 aaKnown RBP20.29■□□□□ 0.84
PPFIA3-213ENST00000602905 SRCIN1Q9C0H9 1055 aa20.29■□□□□ 0.84
PPFIA3-213ENST00000602905 NOB1Q9ULX3 412 aaKnown RBP20.29■□□□□ 0.84
PPFIA3-213ENST00000602905 MYH3P11055 1940 aa20.29■□□□□ 0.84
PPFIA3-213ENST00000602905 CDHR2Q9BYE9 1310 aa20.28■□□□□ 0.84
PPFIA3-213ENST00000602905 SLX4Q8IY92 1834 aa20.28■□□□□ 0.84
PPFIA3-213ENST00000602905 SOGA3Q5TF21 947 aa20.28■□□□□ 0.84
PPFIA3-213ENST00000602905 PRPF40BQ6NWY9 871 aaKnown RBP20.28■□□□□ 0.84
PPFIA3-213ENST00000602905 DDX46Q7L014 1031 aaKnown RBP20.28■□□□□ 0.84
PPFIA3-213ENST00000602905 PDE8AO60658 829 aa20.27■□□□□ 0.84
PPFIA3-213ENST00000602905 HOXA10P31260 410 aaPredicted RBP20.27■□□□□ 0.84
PPFIA3-213ENST00000602905 UBE3BQ7Z3V4 1068 aa20.27■□□□□ 0.84
PPFIA3-213ENST00000602905 CRAMP1Q96RY5 1269 aa20.27■□□□□ 0.84
PPFIA3-213ENST00000602905 TMX4Q9H1E5 349 aaPredicted RBP20.27■□□□□ 0.84
PPFIA3-213ENST00000602905 H7C1W4 665 aa20.26■□□□□ 0.83
PPFIA3-213ENST00000602905 C3orf67Q6ZVT6 689 aa20.26■□□□□ 0.83
PPFIA3-213ENST00000602905 JARID2Q92833 1246 aaPredicted RBP20.26■□□□□ 0.83
PPFIA3-213ENST00000602905 C9orf78Q9NZ63 289 aaPredicted RBP20.26■□□□□ 0.83
PPFIA3-213ENST00000602905 ZNF219Q9P2Y4 722 aaPredicted RBP20.26■□□□□ 0.83
PPFIA3-213ENST00000602905 C21orf2O43822 256 aa20.25■□□□□ 0.83
PPFIA3-213ENST00000602905 SF3B3Q15393 1217 aaKnown RBP20.25■□□□□ 0.83
PPFIA3-213ENST00000602905 ARHGAP45Q92619 1136 aa20.25■□□□□ 0.83
PPFIA3-213ENST00000602905 GOLGB1Q14789 3259 aaKnown RBP20.25■□□□□ 0.83
PPFIA3-213ENST00000602905 BCAR3O75815 825 aa20.24■□□□□ 0.83
PPFIA3-213ENST00000602905 CCDC152Q4G0S7 254 aa20.24■□□□□ 0.83
PPFIA3-213ENST00000602905 FRAT1Q92837 279 aaPredicted RBP20.24■□□□□ 0.83
PPFIA3-213ENST00000602905 GRM8O00222 908 aa20.23■□□□□ 0.83
PPFIA3-213ENST00000602905 CCT4P50991 539 aaKnown RBP20.23■□□□□ 0.83
PPFIA3-213ENST00000602905 PPEF1O14829 653 aaPredicted RBP20.22■□□□□ 0.83
PPFIA3-213ENST00000602905 CCDC93Q567U6 631 aa20.22■□□□□ 0.83
PPFIA3-213ENST00000602905 ABCC4O15439 1325 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms