RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 HDAC9Q9UKV0 1011 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 PLA2R1Q13018 1463 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 PDGFRBP09619 1106 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 BCAMP50895 628 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 FUT2Q10981 343 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 SIM2Q14190 667 aaPredicted RBP6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 JADE2Q9NQC1 790 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 SCINQ9Y6U3 715 aa6.12□□□□□ -1.43
SPTBN1-206ENST00000602898 IQGAP2Q13576 1575 aa6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 ARHGAP33O14559 1287 aa6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 SNPHO15079 494 aa6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 FOSP01100 380 aaPredicted RBP6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 GNALP38405 381 aa6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 SLC39A13Q96H72 371 aa6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 VPS9D1Q9Y2B5 631 aa6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 AGLP35573 1532 aa6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 FHOD3Q2V2M9 1422 aa6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 HIP1RO75146 1068 aa6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 XPCQ01831 940 aaPredicted RBP6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 RASSF7Q02833 373 aa6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 NGEFQ8N5V2 710 aa6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 EID1Q9Y6B2 187 aa6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 GJA3Q9Y6H8 435 aa6.11□□□□□ -1.43
SPTBN1-206ENST00000602898 NPHP1O15259 732 aa6.1□□□□□ -1.43
SPTBN1-206ENST00000602898 GAS2L2Q8NHY3 880 aa6.1□□□□□ -1.43
SPTBN1-206ENST00000602898 NAP1L4Q99733 375 aaKnown RBP6.1□□□□□ -1.43
SPTBN1-206ENST00000602898 KANSL2Q9H9L4 492 aa6.1□□□□□ -1.43
SPTBN1-206ENST00000602898 FAM160A1Q05DH4 1040 aa6.1□□□□□ -1.43
SPTBN1-206ENST00000602898 HSP90AB3PQ58FF7 597 aa6.1□□□□□ -1.43
SPTBN1-206ENST00000602898 PACS2Q86VP3 889 aa6.1□□□□□ -1.43
SPTBN1-206ENST00000602898 CXorf56Q9H5V9 222 aa6.1□□□□□ -1.43
SPTBN1-206ENST00000602898 PTPRHQ9HD43 1115 aa6.1□□□□□ -1.43
SPTBN1-206ENST00000602898 NBPF26B4DH59 902 aa6.09□□□□□ -1.43
SPTBN1-206ENST00000602898 NAT2P11245 290 aa6.09□□□□□ -1.43
SPTBN1-206ENST00000602898 ZBED6P86452 979 aa6.09□□□□□ -1.43
SPTBN1-206ENST00000602898 EFCAB2Q5VUJ9 269 aa6.09□□□□□ -1.43
SPTBN1-206ENST00000602898 OSBPL2Q9H1P3 480 aa6.09□□□□□ -1.43
SPTBN1-206ENST00000602898 PCDHGC3Q9UN70 934 aa6.09□□□□□ -1.43
SPTBN1-206ENST00000602898 SLC45A1Q9Y2W3 748 aa6.09□□□□□ -1.43
SPTBN1-206ENST00000602898 KIAA0556O60303 1618 aa6.09□□□□□ -1.43
SPTBN1-206ENST00000602898 CD46P15529 392 aa6.09□□□□□ -1.43
SPTBN1-206ENST00000602898 DNAJB2P25686 324 aa6.09□□□□□ -1.43
SPTBN1-206ENST00000602898 RPAINQ86UA6 219 aa6.09□□□□□ -1.43
SPTBN1-206ENST00000602898 FAM126AQ9BYI3 521 aaPredicted RBP6.09□□□□□ -1.43
SPTBN1-206ENST00000602898 CLK2P49760 499 aaKnown RBP6.09□□□□□ -1.44
SPTBN1-206ENST00000602898 MTA1Q13330 715 aa6.09□□□□□ -1.44
SPTBN1-206ENST00000602898 CCDC93Q567U6 631 aa6.09□□□□□ -1.44
SPTBN1-206ENST00000602898 LMBRD2Q68DH5 695 aaPredicted RBP6.09□□□□□ -1.44
SPTBN1-206ENST00000602898 ALDH8A1Q9H2A2 487 aaPredicted RBP6.09□□□□□ -1.44
SPTBN1-206ENST00000602898 TIMM44O43615 452 aa6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 FAM200BP0CF97 657 aa6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 ZNF211Q13398 564 aaPredicted RBP6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 ANKRD23Q86SG2 305 aa6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 ZFRQ96KR1 1074 aaKnown RBP6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 CCDC94Q9BW85 323 aaPredicted RBP6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 SEZ6LQ9BYH1 1024 aa6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 LZTS1Q9Y250 596 aa6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 PCDHGB7Q9Y5F8 929 aa6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 SCAMP3O14828 347 aaKnown RBP6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 RIPK4P57078 832 aa6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 DDX10Q13206 875 aaKnown RBP6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 SLC4A8Q2Y0W8 1093 aa6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 ALDH1L2Q3SY69 923 aa6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 KIAA1211Q6ZU35 1233 aa6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 FERMT3Q86UX7 667 aa6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 DRC7Q8IY82 874 aa6.08□□□□□ -1.44
SPTBN1-206ENST00000602898 ESPNB1AK53 854 aa6.07□□□□□ -1.44
SPTBN1-206ENST00000602898 DNAJC6O75061 913 aa6.07□□□□□ -1.44
SPTBN1-206ENST00000602898 HSD3B2P26439 372 aa6.07□□□□□ -1.44
SPTBN1-206ENST00000602898 ADGRD1Q6QNK2 874 aa6.07□□□□□ -1.44
SPTBN1-206ENST00000602898 EPS8L1Q8TE68 723 aa6.07□□□□□ -1.44
SPTBN1-206ENST00000602898 FGAP02671 866 aa6.07□□□□□ -1.44
SPTBN1-206ENST00000602898 SETDB1Q15047 1291 aa6.07□□□□□ -1.44
SPTBN1-206ENST00000602898 B4GALNT3Q6L9W6 998 aa6.07□□□□□ -1.44
SPTBN1-206ENST00000602898 PPP4R4Q6NUP7 873 aa6.07□□□□□ -1.44
SPTBN1-206ENST00000602898 PCGF5Q86SE9 256 aa6.07□□□□□ -1.44
SPTBN1-206ENST00000602898 TMEM87AQ8NBN3 555 aa6.07□□□□□ -1.44
SPTBN1-206ENST00000602898 STK26Q9P289 416 aa6.07□□□□□ -1.44
SPTBN1-206ENST00000602898 MAFBQ9Y5Q3 323 aaPredicted RBP6.07□□□□□ -1.44
SPTBN1-206ENST00000602898 CTTNBP2Q8WZ74 1663 aa6.07□□□□□ -1.44
SPTBN1-206ENST00000602898 GPR37L1O60883 481 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 LSM11P83369 360 aaKnown RBP eCLIP6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 MRPL58Q14197 206 aaKnown RBP6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 ZRSR2Q15696 482 aaKnown RBP6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 ZNF687Q8N1G0 1237 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 TSPYL1Q9H0U9 437 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 HMX1Q9NP08 348 aaPredicted RBP6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 AVENQ9NQS1 362 aaPredicted RBP6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 RABGEF1Q9UJ41 708 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 NPATQ14207 1427 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 RNASEH2AO75792 299 aaKnown RBP6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 CFHP08603 1231 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 VDRP11473 427 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 MTMR3Q13615 1198 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 E2F5Q15329 346 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 TBC1D9Q6ZT07 1266 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 ZSCAN30Q86W11 494 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 NUTM1Q86Y26 1132 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 PGBD3Q8N328 593 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms