RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 METTL22Q9BUU2 404 aaPredicted RBP27.77■■■□□ 2.04
PPFIA3-212ENST00000602897 PLBD2Q8NHP8 589 aa27.75■■■□□ 2.03
PPFIA3-212ENST00000602897 ZBTB1Q9Y2K1 713 aa27.75■■■□□ 2.03
PPFIA3-212ENST00000602897 UTYO14607 1347 aa27.75■■■□□ 2.03
PPFIA3-212ENST00000602897 NBPF26B4DH59 902 aa27.74■■■□□ 2.03
PPFIA3-212ENST00000602897 NBPF10Q6P3W6 841 aaKnown RBP27.74■■■□□ 2.03
PPFIA3-212ENST00000602897 NLGN1Q8N2Q7 840 aa27.74■■■□□ 2.03
PPFIA3-212ENST00000602897 NBPF15Q8N660 670 aa27.74■■■□□ 2.03
PPFIA3-212ENST00000602897 ZBTB47Q9UFB7 747 aaPredicted RBP27.74■■■□□ 2.03
PPFIA3-212ENST00000602897 LRRFIP2Q9Y608 721 aaKnown RBP27.74■■■□□ 2.03
PPFIA3-212ENST00000602897 GYS1P13807 737 aa27.73■■■□□ 2.03
PPFIA3-212ENST00000602897 C9orf78Q9NZ63 289 aaPredicted RBP27.73■■■□□ 2.03
PPFIA3-212ENST00000602897 MMP10P09238 476 aa27.72■■■□□ 2.03
PPFIA3-212ENST00000602897 LNPKQ9C0E8 428 aa27.71■■■□□ 2.03
PPFIA3-212ENST00000602897 SRP68Q9UHB9 627 aaKnown RBP27.71■■■□□ 2.03
PPFIA3-212ENST00000602897 USP42Q9H9J4 1324 aaKnown RBP27.71■■■□□ 2.03
PPFIA3-212ENST00000602897 NBPF7P0C2Y1 421 aaPredicted RBP27.7■■■□□ 2.03
PPFIA3-212ENST00000602897 C8orf34Q49A92 452 aa27.7■■■□□ 2.03
PPFIA3-212ENST00000602897 SSH3Q8TE77 659 aa27.7■■■□□ 2.03
PPFIA3-212ENST00000602897 A1BGP04217 495 aa27.7■■■□□ 2.02
PPFIA3-212ENST00000602897 NLGN2Q8NFZ4 835 aa27.7■■■□□ 2.02
PPFIA3-212ENST00000602897 GRM8O00222 908 aa27.69■■■□□ 2.02
PPFIA3-212ENST00000602897 C4AP0C0L4 1744 aa27.69■■■□□ 2.02
PPFIA3-212ENST00000602897 COL15A1P39059 1388 aa27.68■■■□□ 2.02
PPFIA3-212ENST00000602897 NEURL1BA8MQ27 555 aa27.68■■■□□ 2.02
PPFIA3-212ENST00000602897 ZPR1O75312 459 aa27.68■■■□□ 2.02
PPFIA3-212ENST00000602897 IGKV5-2P06315 115 aa27.68■■■□□ 2.02
PPFIA3-212ENST00000602897 MTX1Q13505 466 aa27.68■■■□□ 2.02
PPFIA3-212ENST00000602897 CD2APQ9Y5K6 639 aa27.68■■■□□ 2.02
PPFIA3-212ENST00000602897 CWF19L2Q2TBE0 894 aaKnown RBP27.67■■■□□ 2.02
PPFIA3-212ENST00000602897 POLA2Q14181 598 aa27.67■■■□□ 2.02
PPFIA3-212ENST00000602897 MYD88Q99836 296 aa27.67■■■□□ 2.02
PPFIA3-212ENST00000602897 GCKRQ14397 625 aa27.66■■■□□ 2.02
PPFIA3-212ENST00000602897 ARFGEF2Q9Y6D5 1785 aa27.66■■■□□ 2.02
PPFIA3-212ENST00000602897 PNMA6EA0A0J9YXQ4 647 aa27.65■■■□□ 2.02
PPFIA3-212ENST00000602897 USPL1Q5W0Q7 1092 aa27.65■■■□□ 2.02
PPFIA3-212ENST00000602897 PIP4K2AP48426 406 aaPredicted RBP27.64■■■□□ 2.02
PPFIA3-212ENST00000602897 EIF5P55010 431 aaKnown RBP27.64■■■□□ 2.02
PPFIA3-212ENST00000602897 PPP1R42Q7Z4L9 355 aa27.64■■■□□ 2.02
PPFIA3-212ENST00000602897 NARFQ9UHQ1 456 aa27.64■■■□□ 2.02
PPFIA3-212ENST00000602897 ZNF330Q9Y3S2 320 aaPredicted RBP27.64■■■□□ 2.02
PPFIA3-212ENST00000602897 RAB11FIP3O75154 756 aa27.63■■■□□ 2.01
PPFIA3-212ENST00000602897 PARP3Q9Y6F1 533 aa27.63■■■□□ 2.01
PPFIA3-212ENST00000602897 IL6STP40189 918 aaPredicted RBP27.62■■■□□ 2.01
PPFIA3-212ENST00000602897 HSP90AB4PQ58FF6 505 aa27.62■■■□□ 2.01
PPFIA3-212ENST00000602897 A0A087WZG4 1122 aa27.61■■■□□ 2.01
PPFIA3-212ENST00000602897 GPR162Q16538 588 aa27.61■■■□□ 2.01
PPFIA3-212ENST00000602897 NPM2Q86SE8 214 aaKnown RBP27.61■■■□□ 2.01
PPFIA3-212ENST00000602897 SRGAP3O43295 1099 aa27.6■■■□□ 2.01
PPFIA3-212ENST00000602897 BMP2KLQ5H9B9 411 aa27.6■■■□□ 2.01
PPFIA3-212ENST00000602897 TTLL7Q6ZT98 887 aa27.6■■■□□ 2.01
PPFIA3-212ENST00000602897 LRRCC1Q9C099 1032 aa27.59■■■□□ 2.01
PPFIA3-212ENST00000602897 KIF6Q6ZMV9 814 aa27.59■■■□□ 2.01
PPFIA3-212ENST00000602897 CCDC191Q8NCU4 936 aa27.58■■■□□ 2.01
PPFIA3-212ENST00000602897 NOP58Q9Y2X3 529 aaKnown RBP27.58■■■□□ 2.01
PPFIA3-212ENST00000602897 DDR1Q08345 913 aa27.57■■■□□ 2
PPFIA3-212ENST00000602897 PLEKHM2Q8IWE5 1019 aa27.57■■■□□ 2
PPFIA3-212ENST00000602897 TBC1D2BQ9UPU7 963 aa27.57■■■□□ 2
PPFIA3-212ENST00000602897 TRIM28Q13263 835 aaKnown RBP27.56■■■□□ 2
PPFIA3-212ENST00000602897 BCL2L12Q9HB09 334 aa27.56■■■□□ 2
PPFIA3-212ENST00000602897 EXOC6BQ9Y2D4 811 aa27.56■■■□□ 2
PPFIA3-212ENST00000602897 AFDNP55196 1824 aaKnown RBP27.56■■■□□ 2
PPFIA3-212ENST00000602897 TM4SF1P30408 202 aa27.56■■■□□ 2
PPFIA3-212ENST00000602897 SUCLG2Q96I99 432 aa27.56■■■□□ 2
PPFIA3-212ENST00000602897 CWC25Q9NXE8 425 aaPredicted RBP27.55■■■□□ 2
PPFIA3-212ENST00000602897 H7C1W4 665 aa27.54■■■□□ 2
PPFIA3-212ENST00000602897 SURF6O75683 361 aaKnown RBP27.54■■■□□ 2
PPFIA3-212ENST00000602897 TCIRG1Q13488 830 aa27.54■■■□□ 2
PPFIA3-212ENST00000602897 NFIXQ14938 502 aa27.54■■■□□ 2
PPFIA3-212ENST00000602897 KAZALD1Q96I82 304 aa27.54■■■□□ 2
PPFIA3-212ENST00000602897 POLRMTO00411 1230 aaKnown RBP27.53■■■□□ 2
PPFIA3-212ENST00000602897 ANP32AP39687 249 aaKnown RBP27.53■■■□□ 2
PPFIA3-212ENST00000602897 ISCA1Q9BUE6 129 aa27.53■■■□□ 2
PPFIA3-212ENST00000602897 OSBPL3Q9H4L5 887 aa27.53■■■□□ 2
PPFIA3-212ENST00000602897 MAP3K15Q6ZN16 1313 aa27.53■■■□□ 2
PPFIA3-212ENST00000602897 C10orf71Q711Q0 1435 aa27.53■■■□□ 2
PPFIA3-212ENST00000602897 HSP90AB3PQ58FF7 597 aa27.52■■■□□ 2
PPFIA3-212ENST00000602897 ZBTB3Q9H5J0 574 aa27.52■■■□□ 2
PPFIA3-212ENST00000602897 ATP5J2-PTCD1G3V325 749 aa27.52■■■□□ 2
PPFIA3-212ENST00000602897 DZIP3Q86Y13 1208 aaKnown RBP27.52■■■□□ 2
PPFIA3-212ENST00000602897 BICC1Q9H694 974 aaKnown RBP27.52■■■□□ 2
PPFIA3-212ENST00000602897 GOLGB1Q14789 3259 aaKnown RBP27.52■■■□□ 2
PPFIA3-212ENST00000602897 ERVV-1B6SEH8 477 aa27.51■■□□□ 1.99
PPFIA3-212ENST00000602897 CASP7P55210 303 aa27.51■■□□□ 1.99
PPFIA3-212ENST00000602897 ERC1Q8IUD2 1116 aa27.51■■□□□ 1.99
PPFIA3-212ENST00000602897 KIF1BPQ96EK5 621 aa27.51■■□□□ 1.99
PPFIA3-212ENST00000602897 APBB1O00213 710 aa27.5■■□□□ 1.99
PPFIA3-212ENST00000602897 SMARCA5O60264 1052 aaPredicted RBP27.5■■□□□ 1.99
PPFIA3-212ENST00000602897 EIF5BO60841 1220 aaKnown RBP27.5■■□□□ 1.99
PPFIA3-212ENST00000602897 YBX3P16989 372 aaKnown RBP eCLIP27.5■■□□□ 1.99
PPFIA3-212ENST00000602897 RABL6Q3YEC7 729 aaPredicted RBP27.5■■□□□ 1.99
PPFIA3-212ENST00000602897 GIGYF2Q6Y7W6 1299 aaKnown RBP27.5■■□□□ 1.99
PPFIA3-212ENST00000602897 BICDL1Q6ZP65 573 aa27.5■■□□□ 1.99
PPFIA3-212ENST00000602897 UTRNP46939 3433 aa27.49■■□□□ 1.99
PPFIA3-212ENST00000602897 TGFB2P61812 414 aa27.49■■□□□ 1.99
PPFIA3-212ENST00000602897 C16orf71Q8IYS4 520 aaPredicted RBP27.49■■□□□ 1.99
PPFIA3-212ENST00000602897 WWC3Q9ULE0 1092 aa27.49■■□□□ 1.99
PPFIA3-212ENST00000602897 CAMTA2O94983 1202 aa27.49■■□□□ 1.99
PPFIA3-212ENST00000602897 TTC22Q5TAA0 569 aa27.49■■□□□ 1.99
PPFIA3-212ENST00000602897 UBE3BQ7Z3V4 1068 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms