RNA–Protein interactions for RNA: ENST00000602544.5

SFXN2-206, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-206ENST00000602544 MYD88Q99836 296 aa18.92■□□□□ 0.62
SFXN2-206ENST00000602544 SPINK5Q9NQ38 1064 aaPredicted RBP18.92■□□□□ 0.62
SFXN2-206ENST00000602544 SH3TC1Q8TE82 1336 aa18.92■□□□□ 0.62
SFXN2-206ENST00000602544 AFDNP55196 1824 aaKnown RBP18.91■□□□□ 0.62
SFXN2-206ENST00000602544 E9PSI1 815 aa18.91■□□□□ 0.62
SFXN2-206ENST00000602544 VAMP4O75379 141 aa18.91■□□□□ 0.62
SFXN2-206ENST00000602544 NEXNQ0ZGT2 675 aa18.91■□□□□ 0.62
SFXN2-206ENST00000602544 ZNF428Q96B54 188 aa18.91■□□□□ 0.62
SFXN2-206ENST00000602544 TMX4Q9H1E5 349 aaPredicted RBP18.91■□□□□ 0.62
SFXN2-206ENST00000602544 RNF181Q9P0P0 153 aa18.91■□□□□ 0.62
SFXN2-206ENST00000602544 ABCC12Q96J65 1359 aa18.91■□□□□ 0.62
SFXN2-206ENST00000602544 HCLS1P14317 486 aaPredicted RBP18.9■□□□□ 0.62
SFXN2-206ENST00000602544 HSP90B1P14625 803 aaKnown RBP18.9■□□□□ 0.62
SFXN2-206ENST00000602544 SLC10A5Q5PT55 438 aa18.9■□□□□ 0.62
SFXN2-206ENST00000602544 KSR2Q6VAB6 950 aa18.9■□□□□ 0.62
SFXN2-206ENST00000602544 ZNF526Q8TF50 670 aaPredicted RBP18.9■□□□□ 0.62
SFXN2-206ENST00000602544 ISCA1Q9BUE6 129 aa18.9■□□□□ 0.62
SFXN2-206ENST00000602544 MAP3K2Q9Y2U5 619 aa18.9■□□□□ 0.62
SFXN2-206ENST00000602544 RASSF7Q02833 373 aa18.89■□□□□ 0.61
SFXN2-206ENST00000602544 TRIM28Q13263 835 aaKnown RBP18.89■□□□□ 0.61
SFXN2-206ENST00000602544 CRY2Q49AN0 593 aa18.89■□□□□ 0.61
SFXN2-206ENST00000602544 GPBP1L1Q9HC44 474 aaPredicted RBP18.89■□□□□ 0.61
SFXN2-206ENST00000602544 PI4KAP2A4QPH2 592 aa18.88■□□□□ 0.61
SFXN2-206ENST00000602544 LMNB1P20700 586 aa18.88■□□□□ 0.61
SFXN2-206ENST00000602544 FKBP5Q13451 457 aaPredicted RBP18.88■□□□□ 0.61
SFXN2-206ENST00000602544 CCDC93Q567U6 631 aa18.88■□□□□ 0.61
SFXN2-206ENST00000602544 PI4KAP1Q8N8J0 262 aa18.88■□□□□ 0.61
SFXN2-206ENST00000602544 FAM89AQ96GI7 184 aa18.88■□□□□ 0.61
SFXN2-206ENST00000602544 METTL22Q9BUU2 404 aaPredicted RBP18.88■□□□□ 0.61
SFXN2-206ENST00000602544 ZNF521Q96K83 1311 aa18.88■□□□□ 0.61
SFXN2-206ENST00000602544 KIAA1551Q9HCM1 1747 aa18.88■□□□□ 0.61
SFXN2-206ENST00000602544 UTRNP46939 3433 aa18.87■□□□□ 0.61
SFXN2-206ENST00000602544 FLIIQ13045 1269 aa18.87■□□□□ 0.61
SFXN2-206ENST00000602544 RTL5Q5HYW3 569 aaPredicted RBP18.87■□□□□ 0.61
SFXN2-206ENST00000602544 CCDC191Q8NCU4 936 aa18.87■□□□□ 0.61
SFXN2-206ENST00000602544 TAOK3Q9H2K8 898 aa18.87■□□□□ 0.61
SFXN2-206ENST00000602544 CWC25Q9NXE8 425 aaPredicted RBP18.87■□□□□ 0.61
SFXN2-206ENST00000602544 HOXA10P31260 410 aaPredicted RBP18.86■□□□□ 0.61
SFXN2-206ENST00000602544 DDX46Q7L014 1031 aaKnown RBP18.86■□□□□ 0.61
SFXN2-206ENST00000602544 RTKN2Q8IZC4 609 aa18.86■□□□□ 0.61
SFXN2-206ENST00000602544 SYNE4Q8N205 404 aa18.86■□□□□ 0.61
SFXN2-206ENST00000602544 CRAMP1Q96RY5 1269 aa18.86■□□□□ 0.61
SFXN2-206ENST00000602544 G2E3Q7L622 706 aa18.85■□□□□ 0.61
SFXN2-206ENST00000602544 ZBTB38Q8NAP3 1195 aaPredicted RBP18.85■□□□□ 0.61
SFXN2-206ENST00000602544 RIC1Q4ADV7 1423 aa18.84■□□□□ 0.61
SFXN2-206ENST00000602544 NFKBIEO00221 500 aa18.84■□□□□ 0.61
SFXN2-206ENST00000602544 IRS4O14654 1257 aaPredicted RBP18.84■□□□□ 0.61
SFXN2-206ENST00000602544 SLFN5Q08AF3 891 aa18.84■□□□□ 0.61
SFXN2-206ENST00000602544 CC2D2BQ6DHV5 1058 aa18.84■□□□□ 0.61
SFXN2-206ENST00000602544 C3orf67Q6ZVT6 689 aa18.84■□□□□ 0.61
SFXN2-206ENST00000602544 CHD4Q14839 1912 aa18.84■□□□□ 0.61
SFXN2-206ENST00000602544 PPEF1O14829 653 aaPredicted RBP18.83■□□□□ 0.6
SFXN2-206ENST00000602544 C7orf43Q8WVR3 580 aa18.83■□□□□ 0.6
SFXN2-206ENST00000602544 NUP98P52948 1817 aa18.83■□□□□ 0.6
SFXN2-206ENST00000602544 GOLGB1Q14789 3259 aaKnown RBP18.82■□□□□ 0.6
SFXN2-206ENST00000602544 BBOX1O75936 387 aa18.82■□□□□ 0.6
SFXN2-206ENST00000602544 GRIPAP1Q4V328 841 aa18.82■□□□□ 0.6
SFXN2-206ENST00000602544 DNAAF4Q8WXU2 420 aa18.82■□□□□ 0.6
SFXN2-206ENST00000602544 ADCY9O60503 1353 aa18.81■□□□□ 0.6
SFXN2-206ENST00000602544 PCCAP05165 728 aaPredicted RBP18.81■□□□□ 0.6
SFXN2-206ENST00000602544 FKBP4Q02790 459 aaKnown RBP eCLIP18.81■□□□□ 0.6
SFXN2-206ENST00000602544 ANKRD31Q8N7Z5 1873 aa18.81■□□□□ 0.6
SFXN2-206ENST00000602544 KDM2BQ8NHM5 1336 aa18.8■□□□□ 0.6
SFXN2-206ENST00000602544 LTBP3Q9NS15 1303 aa18.8■□□□□ 0.6
SFXN2-206ENST00000602544 DPY19L2Q6NUT2 758 aa18.8■□□□□ 0.6
SFXN2-206ENST00000602544 OLFM4Q6UX06 510 aa18.8■□□□□ 0.6
SFXN2-206ENST00000602544 CDCA7LQ96GN5 454 aa18.8■□□□□ 0.6
SFXN2-206ENST00000602544 ABCC4O15439 1325 aa18.79■□□□□ 0.6
SFXN2-206ENST00000602544 ZC3H4Q9UPT8 1303 aaKnown RBP18.79■□□□□ 0.6
SFXN2-206ENST00000602544 GRAPQ13588 217 aa18.79■□□□□ 0.6
SFXN2-206ENST00000602544 GRAPLQ8TC17 118 aaPredicted RBP18.79■□□□□ 0.6
SFXN2-206ENST00000602544 JARID2Q92833 1246 aaPredicted RBP18.79■□□□□ 0.6
SFXN2-206ENST00000602544 ZNF277Q9NRM2 450 aaPredicted RBP18.79■□□□□ 0.6
SFXN2-206ENST00000602544 BRCA1P38398 1863 aaKnown RBP18.79■□□□□ 0.6
SFXN2-206ENST00000602544 NEURL1BA8MQ27 555 aa18.78■□□□□ 0.6
SFXN2-206ENST00000602544 PDE8AO60658 829 aa18.78■□□□□ 0.6
SFXN2-206ENST00000602544 IGKV5-2P06315 115 aa18.78■□□□□ 0.6
SFXN2-206ENST00000602544 HNRNPUQ00839 825 aaKnown RBP eCLIP18.78■□□□□ 0.6
SFXN2-206ENST00000602544 SF3B3Q15393 1217 aaKnown RBP18.78■□□□□ 0.6
SFXN2-206ENST00000602544 CWF19L2Q2TBE0 894 aaKnown RBP18.78■□□□□ 0.6
SFXN2-206ENST00000602544 CCDC152Q4G0S7 254 aa18.78■□□□□ 0.6
SFXN2-206ENST00000602544 ATP6V0A2Q9Y487 856 aa18.78■□□□□ 0.6
SFXN2-206ENST00000602544 ARFGEF1Q9Y6D6 1849 aa18.78■□□□□ 0.6
SFXN2-206ENST00000602544 TMC4Q7Z404 712 aa18.77■□□□□ 0.6
SFXN2-206ENST00000602544 LINS1Q8NG48 757 aa18.77■□□□□ 0.6
SFXN2-206ENST00000602544 COL11A2P13942 1736 aaPredicted RBP18.77■□□□□ 0.59
SFXN2-206ENST00000602544 DLEC1Q9Y238 1755 aa18.76■□□□□ 0.59
SFXN2-206ENST00000602544 F6X3S4 739 aa18.76■□□□□ 0.59
SFXN2-206ENST00000602544 PRELPP51888 382 aa18.76■□□□□ 0.59
SFXN2-206ENST00000602544 SLC4A10Q6U841 1118 aa18.76■□□□□ 0.59
SFXN2-206ENST00000602544 SP8Q8IXZ3 490 aa18.76■□□□□ 0.59
SFXN2-206ENST00000602544 C16orf71Q8IYS4 520 aaPredicted RBP18.76■□□□□ 0.59
SFXN2-206ENST00000602544 JDP2Q8WYK2 163 aa18.76■□□□□ 0.59
SFXN2-206ENST00000602544 PSMD1Q99460 953 aa18.76■□□□□ 0.59
SFXN2-206ENST00000602544 GCKRQ14397 625 aa18.75■□□□□ 0.59
SFXN2-206ENST00000602544 DPP8Q6V1X1 898 aaPredicted RBP18.75■□□□□ 0.59
SFXN2-206ENST00000602544 UBE3BQ7Z3V4 1068 aa18.75■□□□□ 0.59
SFXN2-206ENST00000602544 SUPT20HQ8NEM7 779 aa18.75■□□□□ 0.59
SFXN2-206ENST00000602544 CDHR2Q9BYE9 1310 aa18.74■□□□□ 0.59
SFXN2-206ENST00000602544 GLTPD2A6NH11 291 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms