RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 EIF6P56537 245 aaKnown RBP22.33■■□□□ 1.17
USE1-208ENST00000600970 CC2D2BQ6DHV5 1058 aa22.33■■□□□ 1.17
USE1-208ENST00000600970 NGEFQ8N5V2 710 aa22.33■■□□□ 1.17
USE1-208ENST00000600970 GJA3Q9Y6H8 435 aa22.33■■□□□ 1.17
USE1-208ENST00000600970 DLG5Q8TDM6 1919 aa22.33■■□□□ 1.16
USE1-208ENST00000600970 ERVV-1B6SEH8 477 aa22.32■■□□□ 1.16
USE1-208ENST00000600970 PPP2R1AP30153 589 aa22.32■■□□□ 1.16
USE1-208ENST00000600970 ABT1Q9ULW3 272 aaKnown RBP22.32■■□□□ 1.16
USE1-208ENST00000600970 DDX21Q9NR30 783 aaKnown RBP eCLIP22.31■■□□□ 1.16
USE1-208ENST00000600970 MAP3K15Q6ZN16 1313 aa22.31■■□□□ 1.16
USE1-208ENST00000600970 HOXA10P31260 410 aaPredicted RBP22.3■■□□□ 1.16
USE1-208ENST00000600970 MAP2K1Q02750 393 aaPredicted RBP22.3■■□□□ 1.16
USE1-208ENST00000600970 RPGRQ92834 1020 aaKnown RBP22.3■■□□□ 1.16
USE1-208ENST00000600970 THSD7BQ9C0I4 1608 aa22.3■■□□□ 1.16
USE1-208ENST00000600970 RIC1Q4ADV7 1423 aa22.3■■□□□ 1.16
USE1-208ENST00000600970 TRPM7Q96QT4 1865 aa22.29■■□□□ 1.16
USE1-208ENST00000600970 LMOD1P29536 600 aaPredicted RBP22.29■■□□□ 1.16
USE1-208ENST00000600970 SCNN1DP51172 638 aa22.29■■□□□ 1.16
USE1-208ENST00000600970 FMR1Q06787 632 aaKnown RBP eCLIP22.29■■□□□ 1.16
USE1-208ENST00000600970 TTLL7Q6ZT98 887 aa22.29■■□□□ 1.16
USE1-208ENST00000600970 UBN2Q6ZU65 1347 aa22.29■■□□□ 1.16
USE1-208ENST00000600970 IBTKQ9P2D0 1353 aaPredicted RBP22.28■■□□□ 1.16
USE1-208ENST00000600970 EPS15P42566 896 aa22.28■■□□□ 1.16
USE1-208ENST00000600970 SLC51AQ86UW1 340 aa22.28■■□□□ 1.16
USE1-208ENST00000600970 LARGE2Q8N3Y3 721 aa22.28■■□□□ 1.16
USE1-208ENST00000600970 RRP7AQ9Y3A4 280 aaKnown RBP22.28■■□□□ 1.16
USE1-208ENST00000600970 GPTP24298 496 aa22.27■■□□□ 1.16
USE1-208ENST00000600970 GRIPAP1Q4V328 841 aa22.27■■□□□ 1.16
USE1-208ENST00000600970 SUSD4Q5VX71 490 aa22.27■■□□□ 1.16
USE1-208ENST00000600970 KIF6Q6ZMV9 814 aa22.27■■□□□ 1.16
USE1-208ENST00000600970 EIF4A1P60842 406 aaKnown RBP22.26■■□□□ 1.15
USE1-208ENST00000600970 PNISRQ8TF01 805 aaKnown RBP22.26■■□□□ 1.15
USE1-208ENST00000600970 ABHD8Q96I13 439 aa22.26■■□□□ 1.15
USE1-208ENST00000600970 RBM17Q96I25 401 aaKnown RBP22.26■■□□□ 1.15
USE1-208ENST00000600970 CRAMP1Q96RY5 1269 aa22.26■■□□□ 1.15
USE1-208ENST00000600970 ZBTB3Q9H5J0 574 aa22.26■■□□□ 1.15
USE1-208ENST00000600970 TCERG1O14776 1098 aaKnown RBP22.25■■□□□ 1.15
USE1-208ENST00000600970 PPEF1O14829 653 aaPredicted RBP22.25■■□□□ 1.15
USE1-208ENST00000600970 MYL6BP14649 208 aa22.25■■□□□ 1.15
USE1-208ENST00000600970 USP50Q70EL3 339 aaPredicted RBP22.25■■□□□ 1.15
USE1-208ENST00000600970 CAPNS2Q96L46 248 aa22.25■■□□□ 1.15
USE1-208ENST00000600970 NTSR2O95665 410 aa22.24■■□□□ 1.15
USE1-208ENST00000600970 CST9Q5W186 159 aa22.24■■□□□ 1.15
USE1-208ENST00000600970 ZNF34Q8IZ26 560 aa22.24■■□□□ 1.15
USE1-208ENST00000600970 CYP4F22Q6NT55 531 aa22.23■■□□□ 1.15
USE1-208ENST00000600970 C3orf67Q6ZVT6 689 aa22.23■■□□□ 1.15
USE1-208ENST00000600970 PAXIP1Q6ZW49 1069 aaPredicted RBP22.23■■□□□ 1.15
USE1-208ENST00000600970 NIM1KQ8IY84 436 aa22.23■■□□□ 1.15
USE1-208ENST00000600970 TRAF5O00463 557 aa22.22■■□□□ 1.15
USE1-208ENST00000600970 ECE1P42892 770 aa22.22■■□□□ 1.15
USE1-208ENST00000600970 GIGYF2Q6Y7W6 1299 aaKnown RBP22.22■■□□□ 1.15
USE1-208ENST00000600970 PPIP5K2O43314 1243 aa22.21■■□□□ 1.15
USE1-208ENST00000600970 GRM1Q13255 1194 aa22.21■■□□□ 1.15
USE1-208ENST00000600970 GPR101Q96P66 508 aaPredicted RBP22.21■■□□□ 1.15
USE1-208ENST00000600970 TLL2Q9Y6L7 1015 aa22.21■■□□□ 1.15
USE1-208ENST00000600970 NEFMP07197 916 aa22.2■■□□□ 1.14
USE1-208ENST00000600970 AOC3Q16853 763 aa22.2■■□□□ 1.14
USE1-208ENST00000600970 PPP1R42Q7Z4L9 355 aa22.2■■□□□ 1.14
USE1-208ENST00000600970 THUMPD2Q9BTF0 503 aaKnown RBP22.2■■□□□ 1.14
USE1-208ENST00000600970 NLRP3Q96P20 1036 aa22.19■■□□□ 1.14
USE1-208ENST00000600970 PLEKHF1Q96S99 279 aa22.19■■□□□ 1.14
USE1-208ENST00000600970 BEGAINQ9BUH8 593 aa22.19■■□□□ 1.14
USE1-208ENST00000600970 VPS33BQ9H267 617 aa22.19■■□□□ 1.14
USE1-208ENST00000600970 ADARB2Q9NS39 739 aaKnown RBP22.19■■□□□ 1.14
USE1-208ENST00000600970 GPRC5DQ9NZD1 345 aa22.19■■□□□ 1.14
USE1-208ENST00000600970 FAM161AQ3B820 660 aa22.18■■□□□ 1.14
USE1-208ENST00000600970 PARP10Q53GL7 1025 aa22.18■■□□□ 1.14
USE1-208ENST00000600970 ATP6V0A2Q9Y487 856 aa22.18■■□□□ 1.14
USE1-208ENST00000600970 LAMB2P55268 1798 aa22.17■■□□□ 1.14
USE1-208ENST00000600970 ERBB4Q15303 1308 aa22.17■■□□□ 1.14
USE1-208ENST00000600970 CXCL9Q07325 125 aa22.17■■□□□ 1.14
USE1-208ENST00000600970 NFE2L2Q16236 605 aa22.17■■□□□ 1.14
USE1-208ENST00000600970 TMX4Q9H1E5 349 aaPredicted RBP22.17■■□□□ 1.14
USE1-208ENST00000600970 AOC2O75106 756 aa22.16■■□□□ 1.14
USE1-208ENST00000600970 SLC10A5Q5PT55 438 aa22.16■■□□□ 1.14
USE1-208ENST00000600970 ABCC4O15439 1325 aa22.15■■□□□ 1.14
USE1-208ENST00000600970 MAP2K2P36507 400 aa22.15■■□□□ 1.14
USE1-208ENST00000600970 LRP10Q7Z4F1 713 aa22.15■■□□□ 1.14
USE1-208ENST00000600970 SUPT20HQ8NEM7 779 aa22.15■■□□□ 1.14
USE1-208ENST00000600970 UTP14AQ9BVJ6 771 aaKnown RBP22.15■■□□□ 1.14
USE1-208ENST00000600970 RTFDC1Q9BY42 306 aaPredicted RBP22.15■■□□□ 1.14
USE1-208ENST00000600970 TSKSQ9UJT2 592 aa22.15■■□□□ 1.14
USE1-208ENST00000600970 ZNRF3Q9ULT6 936 aa22.15■■□□□ 1.14
USE1-208ENST00000600970 ANKRD36CQ5JPF3 1778 aa22.15■■□□□ 1.14
USE1-208ENST00000600970 SAPCD2Q86UD0 394 aa22.14■■□□□ 1.13
USE1-208ENST00000600970 CCDC85CA6NKD9 419 aa22.13■■□□□ 1.13
USE1-208ENST00000600970 CELF2O95319 508 aaKnown RBP22.13■■□□□ 1.13
USE1-208ENST00000600970 GMPSP49915 693 aaPredicted RBP22.13■■□□□ 1.13
USE1-208ENST00000600970 PDIA6Q15084 440 aa22.13■■□□□ 1.13
USE1-208ENST00000600970 GLIS2Q9BZE0 524 aaPredicted RBP22.12■■□□□ 1.13
USE1-208ENST00000600970 PGAP2Q9UHJ9 254 aa22.12■■□□□ 1.13
USE1-208ENST00000600970 BBOX1O75936 387 aa22.11■■□□□ 1.13
USE1-208ENST00000600970 SLC34A2O95436 690 aa22.11■■□□□ 1.13
USE1-208ENST00000600970 EIF2S2P20042 333 aaKnown RBP22.11■■□□□ 1.13
USE1-208ENST00000600970 CIAPIN1Q6FI81 312 aa22.11■■□□□ 1.13
USE1-208ENST00000600970 DPP8Q6V1X1 898 aaPredicted RBP22.11■■□□□ 1.13
USE1-208ENST00000600970 SP8Q8IXZ3 490 aa22.11■■□□□ 1.13
USE1-208ENST00000600970 TSPYL4Q9UJ04 414 aa22.11■■□□□ 1.13
USE1-208ENST00000600970 ANXA1P04083 346 aa22.1■■□□□ 1.13
USE1-208ENST00000600970 TAF1P21675 1872 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms