RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 VEGFAP15692 232 aaPredicted RBP15.06■□□□□ 0
SOX2-OT-233ENST00000600778 UTP14AQ9BVJ6 771 aaKnown RBP15.06■□□□□ 0
SOX2-OT-233ENST00000600778 ANP32CO43423 234 aa15.05■□□□□ -0
SOX2-OT-233ENST00000600778 HOXB7P09629 217 aa15.05■□□□□ -0
SOX2-OT-233ENST00000600778 ZNF853P0CG23 659 aa15.05■□□□□ -0
SOX2-OT-233ENST00000600778 APLP1P51693 650 aa15.05■□□□□ -0
SOX2-OT-233ENST00000600778 FKBP4Q02790 459 aaKnown RBP eCLIP15.05■□□□□ -0
SOX2-OT-233ENST00000600778 HSP90AB3PQ58FF7 597 aa15.05■□□□□ -0
SOX2-OT-233ENST00000600778 DUSP27Q5VZP5 1158 aa15.05■□□□□ -0
SOX2-OT-233ENST00000600778 POTEDQ86YR6 584 aa15.05■□□□□ -0
SOX2-OT-233ENST00000600778 RTKN2Q8IZC4 609 aa15.05■□□□□ -0
SOX2-OT-233ENST00000600778 NLRP3Q96P20 1036 aa15.05■□□□□ -0
SOX2-OT-233ENST00000600778 DICER1Q9UPY3 1922 aaKnown RBP15.04■□□□□ -0
SOX2-OT-233ENST00000600778 POTECB2RU33 542 aa15.04■□□□□ -0
SOX2-OT-233ENST00000600778 GNAI1P63096 354 aa15.04■□□□□ -0
SOX2-OT-233ENST00000600778 CALD1Q05682 793 aaKnown RBP15.04■□□□□ -0
SOX2-OT-233ENST00000600778 FSTL1Q12841 308 aa15.04■□□□□ -0
SOX2-OT-233ENST00000600778 TCIRG1Q13488 830 aa15.04■□□□□ -0
SOX2-OT-233ENST00000600778 C3orf67Q6ZVT6 689 aa15.04■□□□□ -0
SOX2-OT-233ENST00000600778 RBM17Q96I25 401 aaKnown RBP15.04■□□□□ -0
SOX2-OT-233ENST00000600778 ZNF277Q9NRM2 450 aaPredicted RBP15.04■□□□□ -0
SOX2-OT-233ENST00000600778 IFT57Q9NWB7 429 aa15.04■□□□□ -0
SOX2-OT-233ENST00000600778 DBF4Q9UBU7 674 aaPredicted RBP15.04■□□□□ -0
SOX2-OT-233ENST00000600778 RIC1Q4ADV7 1423 aa15.03■□□□□ -0
SOX2-OT-233ENST00000600778 ELL2O00472 640 aaPredicted RBP15.03■□□□□ -0
SOX2-OT-233ENST00000600778 TCERG1O14776 1098 aaKnown RBP15.03■□□□□ -0
SOX2-OT-233ENST00000600778 DDNO94850 711 aaPredicted RBP15.03■□□□□ -0
SOX2-OT-233ENST00000600778 HOXA10P31260 410 aaPredicted RBP15.03■□□□□ -0
SOX2-OT-233ENST00000600778 NLRP10Q86W26 655 aa15.03■□□□□ -0
SOX2-OT-233ENST00000600778 SYNE4Q8N205 404 aa15.03■□□□□ -0
SOX2-OT-233ENST00000600778 ZNF428Q96B54 188 aa15.03■□□□□ -0
SOX2-OT-233ENST00000600778 SLC10A5Q5PT55 438 aa15.02■□□□□ -0
SOX2-OT-233ENST00000600778 ANKRD13DQ6ZTN6 518 aa15.02■□□□□ -0
SOX2-OT-233ENST00000600778 SMC1BQ8NDV3 1235 aa15.02■□□□□ -0
SOX2-OT-233ENST00000600778 CRAMP1Q96RY5 1269 aa15.02■□□□□ -0
SOX2-OT-233ENST00000600778 TRMT112Q9UI30 125 aaKnown RBP15.02■□□□□ -0
SOX2-OT-233ENST00000600778 HCLS1P14317 486 aaPredicted RBP15.01□□□□□ -0.01
SOX2-OT-233ENST00000600778 IARSP41252 1262 aaKnown RBP15.01□□□□□ -0.01
SOX2-OT-233ENST00000600778 PLBD2Q8NHP8 589 aa15.01□□□□□ -0.01
SOX2-OT-233ENST00000600778 HYPKQ9NX55 129 aa15.01□□□□□ -0.01
SOX2-OT-233ENST00000600778 ANKRD36CQ5JPF3 1778 aa15.01□□□□□ -0.01
SOX2-OT-233ENST00000600778 WDR90Q96KV7 1748 aa15□□□□□ -0.01
SOX2-OT-233ENST00000600778 RNF123Q5XPI4 1314 aa15□□□□□ -0.01
SOX2-OT-233ENST00000600778 PPEF1O14829 653 aaPredicted RBP15□□□□□ -0.01
SOX2-OT-233ENST00000600778 CC2D2BQ6DHV5 1058 aa15□□□□□ -0.01
SOX2-OT-233ENST00000600778 SLC51AQ86UW1 340 aa15□□□□□ -0.01
SOX2-OT-233ENST00000600778 PSMD1Q99460 953 aa15□□□□□ -0.01
SOX2-OT-233ENST00000600778 ATP5J2-PTCD1G3V325 749 aa14.99□□□□□ -0.01
SOX2-OT-233ENST00000600778 HTRA3P83110 453 aa14.99□□□□□ -0.01
SOX2-OT-233ENST00000600778 C8orf58Q8NAV2 365 aa14.99□□□□□ -0.01
SOX2-OT-233ENST00000600778 MRS2Q9HD23 443 aa14.99□□□□□ -0.01
SOX2-OT-233ENST00000600778 SH3TC1Q8TE82 1336 aa14.98□□□□□ -0.01
SOX2-OT-233ENST00000600778 RIC3Q7Z5B4 369 aa14.98□□□□□ -0.01
SOX2-OT-233ENST00000600778 ISCA1Q9BUE6 129 aa14.98□□□□□ -0.01
SOX2-OT-233ENST00000600778 TMX4Q9H1E5 349 aaPredicted RBP14.98□□□□□ -0.01
SOX2-OT-233ENST00000600778 PHAXQ9H814 394 aaKnown RBP14.98□□□□□ -0.01
SOX2-OT-233ENST00000600778 SNED1Q8TER0 1413 aa14.98□□□□□ -0.01
SOX2-OT-233ENST00000600778 ABCC4O15439 1325 aa14.97□□□□□ -0.01
SOX2-OT-233ENST00000600778 ZNF541Q9H0D2 1346 aa14.97□□□□□ -0.01
SOX2-OT-233ENST00000600778 GRIPAP1Q4V328 841 aa14.97□□□□□ -0.01
SOX2-OT-233ENST00000600778 DNAJC5GQ8N7S2 189 aa14.97□□□□□ -0.01
SOX2-OT-233ENST00000600778 JDP2Q8WYK2 163 aa14.97□□□□□ -0.01
SOX2-OT-233ENST00000600778 FZD9O00144 591 aa14.96□□□□□ -0.01
SOX2-OT-233ENST00000600778 GOLGA2Q08379 1002 aa14.96□□□□□ -0.01
SOX2-OT-233ENST00000600778 CCDC27Q2M243 656 aa14.96□□□□□ -0.01
SOX2-OT-233ENST00000600778 RTL5Q5HYW3 569 aaPredicted RBP14.96□□□□□ -0.01
SOX2-OT-233ENST00000600778 DDX46Q7L014 1031 aaKnown RBP14.96□□□□□ -0.01
SOX2-OT-233ENST00000600778 WWC1Q8IX03 1113 aa14.96□□□□□ -0.01
SOX2-OT-233ENST00000600778 TSPYL6Q8N831 410 aa14.96□□□□□ -0.01
SOX2-OT-233ENST00000600778 TSR2Q969E8 191 aaKnown RBP14.96□□□□□ -0.01
SOX2-OT-233ENST00000600778 FAM89AQ96GI7 184 aa14.96□□□□□ -0.01
SOX2-OT-233ENST00000600778 ATP6V0A2Q9Y487 856 aa14.96□□□□□ -0.01
SOX2-OT-233ENST00000600778 IQCA1LA6NCM1 817 aa14.95□□□□□ -0.02
SOX2-OT-233ENST00000600778 BBOX1O75936 387 aa14.95□□□□□ -0.02
SOX2-OT-233ENST00000600778 POTEIP0CG38 1075 aa14.95□□□□□ -0.02
SOX2-OT-233ENST00000600778 POTEJP0CG39 1038 aa14.95□□□□□ -0.02
SOX2-OT-233ENST00000600778 CCDC30Q5VVM6 783 aa14.95□□□□□ -0.02
SOX2-OT-233ENST00000600778 LARGE2Q8N3Y3 721 aa14.95□□□□□ -0.02
SOX2-OT-233ENST00000600778 L3MBTL3Q96JM7 780 aaPredicted RBP14.95□□□□□ -0.02
SOX2-OT-233ENST00000600778 SALL2Q9Y467 1007 aaPredicted RBP14.95□□□□□ -0.02
SOX2-OT-233ENST00000600778 LAMB2P55268 1798 aa14.95□□□□□ -0.02
SOX2-OT-233ENST00000600778 EIF6P56537 245 aaKnown RBP14.94□□□□□ -0.02
SOX2-OT-233ENST00000600778 GRAPQ13588 217 aa14.94□□□□□ -0.02
SOX2-OT-233ENST00000600778 GRAPLQ8TC17 118 aaPredicted RBP14.94□□□□□ -0.02
SOX2-OT-233ENST00000600778 MYD88Q99836 296 aa14.94□□□□□ -0.02
SOX2-OT-233ENST00000600778 TAF1DQ9H5J8 278 aaPredicted RBP14.94□□□□□ -0.02
SOX2-OT-233ENST00000600778 TRIM28Q13263 835 aaKnown RBP14.93□□□□□ -0.02
SOX2-OT-233ENST00000600778 CHADLQ6NUI6 762 aa14.93□□□□□ -0.02
SOX2-OT-233ENST00000600778 SP8Q8IXZ3 490 aa14.93□□□□□ -0.02
SOX2-OT-233ENST00000600778 CHMP4AQ9BY43 222 aa14.93□□□□□ -0.02
SOX2-OT-233ENST00000600778 HACL1Q9UJ83 578 aa14.93□□□□□ -0.02
SOX2-OT-233ENST00000600778 GJA3Q9Y6H8 435 aa14.93□□□□□ -0.02
SOX2-OT-233ENST00000600778 IRS4O14654 1257 aaPredicted RBP14.92□□□□□ -0.02
SOX2-OT-233ENST00000600778 PPIP5K2O43314 1243 aa14.92□□□□□ -0.02
SOX2-OT-233ENST00000600778 AOC3Q16853 763 aa14.92□□□□□ -0.02
SOX2-OT-233ENST00000600778 EAPPQ56P03 285 aaPredicted RBP14.92□□□□□ -0.02
SOX2-OT-233ENST00000600778 DPP8Q6V1X1 898 aaPredicted RBP14.92□□□□□ -0.02
SOX2-OT-233ENST00000600778 GPC2Q8N158 579 aa14.92□□□□□ -0.02
SOX2-OT-233ENST00000600778 MPNDQ8N594 471 aa14.92□□□□□ -0.02
SOX2-OT-233ENST00000600778 KLRG1Q96E93 195 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms