RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 SH3TC1Q8TE82 1336 aa15.49■□□□□ 0.07
TGFB1-204ENST00000600196 COL24A1Q17RW2 1714 aa15.49■□□□□ 0.07
TGFB1-204ENST00000600196 POLRMTO00411 1230 aaKnown RBP15.49■□□□□ 0.07
TGFB1-204ENST00000600196 MVPQ14764 893 aaKnown RBP15.49■□□□□ 0.07
TGFB1-204ENST00000600196 PLA2G12BQ9BX93 195 aa15.49■□□□□ 0.07
TGFB1-204ENST00000600196 GRM8O00222 908 aa15.48■□□□□ 0.07
TGFB1-204ENST00000600196 SERPINB2P05120 415 aa15.48■□□□□ 0.07
TGFB1-204ENST00000600196 SMIM5Q71RC9 77 aa15.48■□□□□ 0.07
TGFB1-204ENST00000600196 NBPF5PQ86XG9 351 aaPredicted RBP15.48■□□□□ 0.07
TGFB1-204ENST00000600196 SPON1Q9HCB6 807 aa15.48■□□□□ 0.07
TGFB1-204ENST00000600196 CASZ1Q86V15 1759 aa15.48■□□□□ 0.07
TGFB1-204ENST00000600196 ARFGEF2Q9Y6D5 1785 aa15.48■□□□□ 0.07
TGFB1-204ENST00000600196 UBN2Q6ZU65 1347 aa15.47■□□□□ 0.07
TGFB1-204ENST00000600196 ATP5J2-PTCD1G3V325 749 aa15.47■□□□□ 0.07
TGFB1-204ENST00000600196 ZBTB7BO15156 539 aaPredicted RBP15.47■□□□□ 0.07
TGFB1-204ENST00000600196 NTSR2O95665 410 aa15.47■□□□□ 0.07
TGFB1-204ENST00000600196 MMP10P09238 476 aa15.47■□□□□ 0.07
TGFB1-204ENST00000600196 SUSD4Q5VX71 490 aa15.47■□□□□ 0.07
TGFB1-204ENST00000600196 TMEM57Q8N5G2 664 aa15.47■□□□□ 0.07
TGFB1-204ENST00000600196 SGIP1Q9BQI5 828 aa15.47■□□□□ 0.07
TGFB1-204ENST00000600196 USP44Q9H0E7 712 aa15.47■□□□□ 0.07
TGFB1-204ENST00000600196 C9orf78Q9NZ63 289 aaPredicted RBP15.47■□□□□ 0.07
TGFB1-204ENST00000600196 TRMT112Q9UI30 125 aaKnown RBP15.47■□□□□ 0.07
TGFB1-204ENST00000600196 ST5P78524 1137 aa15.46■□□□□ 0.07
TGFB1-204ENST00000600196 ERICH6BQ5W0A0 696 aa15.46■□□□□ 0.07
TGFB1-204ENST00000600196 CNBD1Q8NA66 436 aa15.46■□□□□ 0.07
TGFB1-204ENST00000600196 CLUAP1Q96AJ1 413 aa15.46■□□□□ 0.07
TGFB1-204ENST00000600196 BRIP1Q9BX63 1249 aa15.46■□□□□ 0.07
TGFB1-204ENST00000600196 ANKRD36CQ5JPF3 1778 aa15.46■□□□□ 0.07
TGFB1-204ENST00000600196 N4BP2Q86UW6 1770 aaPredicted RBP15.45■□□□□ 0.06
TGFB1-204ENST00000600196 KLRG2A4D1S0 409 aaPredicted RBP15.45■□□□□ 0.06
TGFB1-204ENST00000600196 PLIN1O60240 522 aa15.45■□□□□ 0.06
TGFB1-204ENST00000600196 RLBP1P12271 317 aa15.45■□□□□ 0.06
TGFB1-204ENST00000600196 GPTP24298 496 aa15.45■□□□□ 0.06
TGFB1-204ENST00000600196 GTF2E1P29083 439 aaPredicted RBP15.45■□□□□ 0.06
TGFB1-204ENST00000600196 CASP7P55210 303 aa15.45■□□□□ 0.06
TGFB1-204ENST00000600196 CWF19L2Q2TBE0 894 aaKnown RBP15.45■□□□□ 0.06
TGFB1-204ENST00000600196 PSDA5PKW4 1024 aaPredicted RBP15.44■□□□□ 0.06
TGFB1-204ENST00000600196 DDR1Q08345 913 aa15.44■□□□□ 0.06
TGFB1-204ENST00000600196 ITPRIPQ8IWB1 547 aa15.44■□□□□ 0.06
TGFB1-204ENST00000600196 PDGFDQ9GZP0 370 aaPredicted RBP15.44■□□□□ 0.06
TGFB1-204ENST00000600196 PDE8AO60658 829 aa15.43■□□□□ 0.06
TGFB1-204ENST00000600196 UBTFL1P0CB47 393 aaPredicted RBP15.43■□□□□ 0.06
TGFB1-204ENST00000600196 PDE6BP35913 854 aa15.43■□□□□ 0.06
TGFB1-204ENST00000600196 SF3B3Q15393 1217 aaKnown RBP15.43■□□□□ 0.06
TGFB1-204ENST00000600196 PRR5LQ6MZQ0 368 aa15.43■□□□□ 0.06
TGFB1-204ENST00000600196 BICDL1Q6ZP65 573 aa15.43■□□□□ 0.06
TGFB1-204ENST00000600196 PANK1Q8TE04 598 aa15.43■□□□□ 0.06
TGFB1-204ENST00000600196 NLRP3Q96P20 1036 aa15.43■□□□□ 0.06
TGFB1-204ENST00000600196 ZBTB40Q9NUA8 1239 aa15.43■□□□□ 0.06
TGFB1-204ENST00000600196 CD2APQ9Y5K6 639 aa15.43■□□□□ 0.06
TGFB1-204ENST00000600196 NRXN2Q9P2S2 1712 aa15.43■□□□□ 0.06
TGFB1-204ENST00000600196 IRS4O14654 1257 aaPredicted RBP15.42■□□□□ 0.06
TGFB1-204ENST00000600196 ZBTB7AO95365 584 aa15.42■□□□□ 0.06
TGFB1-204ENST00000600196 GNAI2P04899 355 aa15.42■□□□□ 0.06
TGFB1-204ENST00000600196 PTGER2P43116 358 aa15.42■□□□□ 0.06
TGFB1-204ENST00000600196 TGFB2P61812 414 aa15.42■□□□□ 0.06
TGFB1-204ENST00000600196 NPHP1O15259 732 aa15.41■□□□□ 0.06
TGFB1-204ENST00000600196 CSF1RP07333 972 aa15.41■□□□□ 0.06
TGFB1-204ENST00000600196 MTX1Q13505 466 aa15.41■□□□□ 0.06
TGFB1-204ENST00000600196 RABL6Q3YEC7 729 aaPredicted RBP15.41■□□□□ 0.06
TGFB1-204ENST00000600196 RPAP2Q8IXW5 612 aaPredicted RBP15.41■□□□□ 0.06
TGFB1-204ENST00000600196 FAM89AQ96GI7 184 aa15.41■□□□□ 0.06
TGFB1-204ENST00000600196 COG6Q9Y2V7 657 aa15.41■□□□□ 0.06
TGFB1-204ENST00000600196 RTL9Q8NET4 1388 aa15.4■□□□□ 0.06
TGFB1-204ENST00000600196 NBPF7P0C2Y1 421 aaPredicted RBP15.4■□□□□ 0.06
TGFB1-204ENST00000600196 CRY2Q49AN0 593 aa15.4■□□□□ 0.06
TGFB1-204ENST00000600196 UBE3BQ7Z3V4 1068 aa15.4■□□□□ 0.06
TGFB1-204ENST00000600196 ATF5Q9Y2D1 282 aaPredicted RBP15.4■□□□□ 0.06
TGFB1-204ENST00000600196 NEFLP07196 543 aa15.39■□□□□ 0.05
TGFB1-204ENST00000600196 HOXA10P31260 410 aaPredicted RBP15.39■□□□□ 0.05
TGFB1-204ENST00000600196 ERFEQ4G0M1 354 aa15.39■□□□□ 0.05
TGFB1-204ENST00000600196 C20orf194Q5TEA3 1177 aa15.39■□□□□ 0.05
TGFB1-204ENST00000600196 MSL1Q68DK7 614 aa15.39■□□□□ 0.05
TGFB1-204ENST00000600196 FBXO3Q9UK99 471 aa15.39■□□□□ 0.05
TGFB1-204ENST00000600196 TNNQ9UQP3 1299 aa15.39■□□□□ 0.05
TGFB1-204ENST00000600196 CCDC152Q4G0S7 254 aa15.38■□□□□ 0.05
TGFB1-204ENST00000600196 TMC4Q7Z404 712 aa15.38■□□□□ 0.05
TGFB1-204ENST00000600196 MEIS3Q99687 375 aa15.38■□□□□ 0.05
TGFB1-204ENST00000600196 C10orf71Q711Q0 1435 aa15.37■□□□□ 0.05
TGFB1-204ENST00000600196 CTSWP56202 376 aa15.37■□□□□ 0.05
TGFB1-204ENST00000600196 FOXO4P98177 505 aa15.37■□□□□ 0.05
TGFB1-204ENST00000600196 TTLL11Q8NHH1 800 aa15.37■□□□□ 0.05
TGFB1-204ENST00000600196 CRAMP1Q96RY5 1269 aa15.37■□□□□ 0.05
TGFB1-204ENST00000600196 AFDNP55196 1824 aaKnown RBP15.36■□□□□ 0.05
TGFB1-204ENST00000600196 H0YIN7 160 aa15.36■□□□□ 0.05
TGFB1-204ENST00000600196 NPR1P16066 1061 aa15.36■□□□□ 0.05
TGFB1-204ENST00000600196 ALDH1B1P30837 517 aa15.36■□□□□ 0.05
TGFB1-204ENST00000600196 ATP8B2P98198 1209 aa15.36■□□□□ 0.05
TGFB1-204ENST00000600196 GRIPAP1Q4V328 841 aa15.36■□□□□ 0.05
TGFB1-204ENST00000600196 STYK1Q6J9G0 422 aa15.36■□□□□ 0.05
TGFB1-204ENST00000600196 NUTM1Q86Y26 1132 aa15.36■□□□□ 0.05
TGFB1-204ENST00000600196 KAZALD1Q96I82 304 aa15.36■□□□□ 0.05
TGFB1-204ENST00000600196 HMMRO75330 724 aa15.35■□□□□ 0.05
TGFB1-204ENST00000600196 BBOX1O75936 387 aa15.35■□□□□ 0.05
TGFB1-204ENST00000600196 SRGNP10124 158 aa15.35■□□□□ 0.05
TGFB1-204ENST00000600196 MASTLQ96GX5 879 aa15.35■□□□□ 0.05
TGFB1-204ENST00000600196 RBM17Q96I25 401 aaKnown RBP15.35■□□□□ 0.05
TGFB1-204ENST00000600196 SUCLG2Q96I99 432 aa15.35■□□□□ 0.05
TGFB1-204ENST00000600196 FAM177BA6PVY3 158 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms