RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 RNF181Q9P0P0 153 aa36.32■■■■□ 3.4
ZNF558-206ENST00000599938 GOLGA2Q08379 1002 aa36.31■■■■□ 3.4
ZNF558-206ENST00000599938 TWISTNBQ3B726 338 aaPredicted RBP36.31■■■■□ 3.4
ZNF558-206ENST00000599938 NLRP10Q86W26 655 aa36.31■■■■□ 3.4
ZNF558-206ENST00000599938 PHAXQ9H814 394 aaKnown RBP36.3■■■■□ 3.4
ZNF558-206ENST00000599938 RNF123Q5XPI4 1314 aa36.3■■■■□ 3.4
ZNF558-206ENST00000599938 CRY2Q49AN0 593 aa36.29■■■■□ 3.4
ZNF558-206ENST00000599938 GPBP1L1Q9HC44 474 aaPredicted RBP36.29■■■■□ 3.4
ZNF558-206ENST00000599938 NFKBIEO00221 500 aa36.28■■■■□ 3.4
ZNF558-206ENST00000599938 FER1L6Q2WGJ9 1857 aa36.28■■■■□ 3.4
ZNF558-206ENST00000599938 SOGA3Q5TF21 947 aa36.26■■■■□ 3.4
ZNF558-206ENST00000599938 RIC3Q7Z5B4 369 aa36.26■■■■□ 3.4
ZNF558-206ENST00000599938 RPGRQ92834 1020 aaKnown RBP36.26■■■■□ 3.4
ZNF558-206ENST00000599938 STK31Q9BXU1 1019 aa36.26■■■■□ 3.4
ZNF558-206ENST00000599938 CCER2I3L3R5 266 aa36.25■■■■□ 3.39
ZNF558-206ENST00000599938 LMNB1P20700 586 aa36.25■■■■□ 3.39
ZNF558-206ENST00000599938 TRMT112Q9UI30 125 aaKnown RBP36.25■■■■□ 3.39
ZNF558-206ENST00000599938 ATP5J2-PTCD1G3V325 749 aa36.23■■■■□ 3.39
ZNF558-206ENST00000599938 ALDH1B1P30837 517 aa36.23■■■■□ 3.39
ZNF558-206ENST00000599938 ISCA1Q9BUE6 129 aa36.23■■■■□ 3.39
ZNF558-206ENST00000599938 CCDC88AQ3V6T2 1871 aa36.22■■■■□ 3.39
ZNF558-206ENST00000599938 TCERG1O14776 1098 aaKnown RBP36.22■■■■□ 3.39
ZNF558-206ENST00000599938 C3orf67Q6ZVT6 689 aa36.22■■■■□ 3.39
ZNF558-206ENST00000599938 ZNF428Q96B54 188 aa36.22■■■■□ 3.39
ZNF558-206ENST00000599938 MYH16Q9H6N6 1097 aa36.22■■■■□ 3.39
ZNF558-206ENST00000599938 SPINK5Q9NQ38 1064 aaPredicted RBP36.22■■■■□ 3.39
ZNF558-206ENST00000599938 SH3TC1Q8TE82 1336 aa36.22■■■■□ 3.39
ZNF558-206ENST00000599938 TIAM2Q8IVF5 1701 aa36.22■■■■□ 3.39
ZNF558-206ENST00000599938 DDX58O95786 925 aaKnown RBP36.21■■■■□ 3.39
ZNF558-206ENST00000599938 PRELPP51888 382 aa36.21■■■■□ 3.39
ZNF558-206ENST00000599938 CCDC93Q567U6 631 aa36.21■■■■□ 3.39
ZNF558-206ENST00000599938 SLC10A5Q5PT55 438 aa36.21■■■■□ 3.39
ZNF558-206ENST00000599938 NLRP3Q96P20 1036 aa36.21■■■■□ 3.39
ZNF558-206ENST00000599938 TAOK3Q9H2K8 898 aa36.21■■■■□ 3.39
ZNF558-206ENST00000599938 C7orf43Q8WVR3 580 aa36.2■■■■□ 3.39
ZNF558-206ENST00000599938 LAMB2P55268 1798 aa36.2■■■■□ 3.38
ZNF558-206ENST00000599938 EXOSC9Q06265 439 aaKnown RBP36.19■■■■□ 3.38
ZNF558-206ENST00000599938 ZNF521Q96K83 1311 aa36.18■■■■□ 3.38
ZNF558-206ENST00000599938 LTBP3Q9NS15 1303 aa36.18■■■■□ 3.38
ZNF558-206ENST00000599938 HCLS1P14317 486 aaPredicted RBP36.18■■■■□ 3.38
ZNF558-206ENST00000599938 HOXA10P31260 410 aaPredicted RBP36.18■■■■□ 3.38
ZNF558-206ENST00000599938 SYNE4Q8N205 404 aa36.18■■■■□ 3.38
ZNF558-206ENST00000599938 RBM17Q96I25 401 aaKnown RBP36.18■■■■□ 3.38
ZNF558-206ENST00000599938 ZC3H4Q9UPT8 1303 aaKnown RBP36.17■■■■□ 3.38
ZNF558-206ENST00000599938 MYD88Q99836 296 aa36.16■■■■□ 3.38
ZNF558-206ENST00000599938 DDX60Q8IY21 1712 aaKnown RBP36.15■■■■□ 3.38
ZNF558-206ENST00000599938 TRIM28Q13263 835 aaKnown RBP36.15■■■■□ 3.38
ZNF558-206ENST00000599938 OLFM4Q6UX06 510 aa36.14■■■■□ 3.38
ZNF558-206ENST00000599938 CRAMP1Q96RY5 1269 aa36.14■■■■□ 3.38
ZNF558-206ENST00000599938 DICER1Q9UPY3 1922 aaKnown RBP36.13■■■■□ 3.37
ZNF558-206ENST00000599938 SLC4A2P04920 1241 aa36.13■■■■□ 3.37
ZNF558-206ENST00000599938 VAMP4O75379 141 aa36.12■■■■□ 3.37
ZNF558-206ENST00000599938 FAM89AQ96GI7 184 aa36.12■■■■□ 3.37
ZNF558-206ENST00000599938 MAP3K2Q9Y2U5 619 aa36.12■■■■□ 3.37
ZNF558-206ENST00000599938 CACNA1FO60840 1977 aa36.12■■■■□ 3.37
ZNF558-206ENST00000599938 METTL22Q9BUU2 404 aaPredicted RBP36.11■■■■□ 3.37
ZNF558-206ENST00000599938 PI4KAP2A4QPH2 592 aa36.1■■■■□ 3.37
ZNF558-206ENST00000599938 PPEF1O14829 653 aaPredicted RBP36.1■■■■□ 3.37
ZNF558-206ENST00000599938 DIEXFQ68CQ4 756 aaKnown RBP36.1■■■■□ 3.37
ZNF558-206ENST00000599938 KSR2Q6VAB6 950 aa36.1■■■■□ 3.37
ZNF558-206ENST00000599938 G2E3Q7L622 706 aa36.1■■■■□ 3.37
ZNF558-206ENST00000599938 RTKN2Q8IZC4 609 aa36.1■■■■□ 3.37
ZNF558-206ENST00000599938 PI4KAP1Q8N8J0 262 aa36.1■■■■□ 3.37
ZNF558-206ENST00000599938 KDM2BQ8NHM5 1336 aa36.09■■■■□ 3.37
ZNF558-206ENST00000599938 FKBP4Q02790 459 aaKnown RBP eCLIP36.09■■■■□ 3.37
ZNF558-206ENST00000599938 RTL5Q5HYW3 569 aaPredicted RBP36.09■■■■□ 3.37
ZNF558-206ENST00000599938 ABCC4O15439 1325 aa36.08■■■■□ 3.37
ZNF558-206ENST00000599938 C1QTNF8P60827 252 aa36.08■■■■□ 3.37
ZNF558-206ENST00000599938 CCDC191Q8NCU4 936 aa36.08■■■■□ 3.37
ZNF558-206ENST00000599938 FLIIQ13045 1269 aa36.07■■■■□ 3.36
ZNF558-206ENST00000599938 CWC25Q9NXE8 425 aaPredicted RBP36.07■■■■□ 3.36
ZNF558-206ENST00000599938 SNED1Q8TER0 1413 aa36.07■■■■□ 3.36
ZNF558-206ENST00000599938 CC2D2BQ6DHV5 1058 aa36.06■■■■□ 3.36
ZNF558-206ENST00000599938 ZBTB38Q8NAP3 1195 aaPredicted RBP36.06■■■■□ 3.36
ZNF558-206ENST00000599938 NMRK2Q9NPI5 230 aa36.06■■■■□ 3.36
ZNF558-206ENST00000599938 IRS4O14654 1257 aaPredicted RBP36.05■■■■□ 3.36
ZNF558-206ENST00000599938 KIF3CO14782 793 aa36.05■■■■□ 3.36
ZNF558-206ENST00000599938 NEXNQ0ZGT2 675 aa36.04■■■■□ 3.36
ZNF558-206ENST00000599938 DDX46Q7L014 1031 aaKnown RBP36.04■■■■□ 3.36
ZNF558-206ENST00000599938 FKBP5Q13451 457 aaPredicted RBP36.03■■■■□ 3.36
ZNF558-206ENST00000599938 ZNF277Q9NRM2 450 aaPredicted RBP36.03■■■■□ 3.36
ZNF558-206ENST00000599938 SLC51AQ86UW1 340 aa36.02■■■■□ 3.36
ZNF558-206ENST00000599938 E9PSI1 815 aa36.01■■■■□ 3.36
ZNF558-206ENST00000599938 TMX4Q9H1E5 349 aaPredicted RBP36.01■■■■□ 3.36
ZNF558-206ENST00000599938 PCCAP05165 728 aaPredicted RBP36■■■■□ 3.35
ZNF558-206ENST00000599938 GRAPQ13588 217 aa36■■■■□ 3.35
ZNF558-206ENST00000599938 GRAPLQ8TC17 118 aaPredicted RBP36■■■■□ 3.35
ZNF558-206ENST00000599938 PSMD1Q99460 953 aa36■■■■□ 3.35
ZNF558-206ENST00000599938 TAF1P21675 1872 aa35.99■■■■□ 3.35
ZNF558-206ENST00000599938 GLTPD2A6NH11 291 aa35.99■■■■□ 3.35
ZNF558-206ENST00000599938 IGKV5-2P06315 115 aa35.99■■■■□ 3.35
ZNF558-206ENST00000599938 HSP90B1P14625 803 aaKnown RBP35.99■■■■□ 3.35
ZNF558-206ENST00000599938 GRIPAP1Q4V328 841 aa35.99■■■■□ 3.35
ZNF558-206ENST00000599938 ATP6V0A2Q9Y487 856 aa35.99■■■■□ 3.35
ZNF558-206ENST00000599938 SF3B3Q15393 1217 aaKnown RBP35.98■■■■□ 3.35
ZNF558-206ENST00000599938 BBOX1O75936 387 aa35.97■■■■□ 3.35
ZNF558-206ENST00000599938 MIER1Q8N108 512 aa35.97■■■■□ 3.35
ZNF558-206ENST00000599938 IARSP41252 1262 aaKnown RBP35.96■■■■□ 3.35
ZNF558-206ENST00000599938 CWF19L2Q2TBE0 894 aaKnown RBP35.96■■■■□ 3.35
ZNF558-206ENST00000599938 DNAAF4Q8WXU2 420 aa35.96■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms