RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 KLRG2A4D1S0 409 aaPredicted RBP36.19■■■■□ 3.38
SSBP4-206ENST00000599699 ATP5J2-PTCD1G3V325 749 aa36.19■■■■□ 3.38
SSBP4-206ENST00000599699 SLC4A2P04920 1241 aa36.19■■■■□ 3.38
SSBP4-206ENST00000599699 ZNF428Q96B54 188 aa36.19■■■■□ 3.38
SSBP4-206ENST00000599699 TRMT112Q9UI30 125 aaKnown RBP36.19■■■■□ 3.38
SSBP4-206ENST00000599699 ARFGEF1Q9Y6D6 1849 aa36.19■■■■□ 3.38
SSBP4-206ENST00000599699 ISCA1Q9BUE6 129 aa36.16■■■■□ 3.38
SSBP4-206ENST00000599699 ANKRD36CQ5JPF3 1778 aa36.16■■■■□ 3.38
SSBP4-206ENST00000599699 RNF123Q5XPI4 1314 aa36.15■■■■□ 3.38
SSBP4-206ENST00000599699 E9PSI1 815 aa36.15■■■■□ 3.38
SSBP4-206ENST00000599699 PRPF40BQ6NWY9 871 aaKnown RBP36.15■■■■□ 3.38
SSBP4-206ENST00000599699 C21orf2O43822 256 aa36.14■■■■□ 3.38
SSBP4-206ENST00000599699 RPGRQ92834 1020 aaKnown RBP36.14■■■■□ 3.38
SSBP4-206ENST00000599699 MYD88Q99836 296 aa36.14■■■■□ 3.38
SSBP4-206ENST00000599699 ZNF784Q8NCA9 323 aaPredicted RBP36.13■■■■□ 3.37
SSBP4-206ENST00000599699 SH3TC1Q8TE82 1336 aa36.12■■■■□ 3.37
SSBP4-206ENST00000599699 RIC1Q4ADV7 1423 aa36.12■■■■□ 3.37
SSBP4-206ENST00000599699 G2E3Q7L622 706 aa36.12■■■■□ 3.37
SSBP4-206ENST00000599699 NLRP3Q96P20 1036 aa36.12■■■■□ 3.37
SSBP4-206ENST00000599699 MAP3K2Q9Y2U5 619 aa36.12■■■■□ 3.37
SSBP4-206ENST00000599699 TNRC6CQ9HCJ0 1690 aaKnown RBP36.11■■■■□ 3.37
SSBP4-206ENST00000599699 CRY2Q49AN0 593 aa36.11■■■■□ 3.37
SSBP4-206ENST00000599699 SLC10A5Q5PT55 438 aa36.11■■■■□ 3.37
SSBP4-206ENST00000599699 KSR2Q6VAB6 950 aa36.11■■■■□ 3.37
SSBP4-206ENST00000599699 ARFGEF2Q9Y6D5 1785 aa36.1■■■■□ 3.37
SSBP4-206ENST00000599699 PI4KAP2A4QPH2 592 aa36.1■■■■□ 3.37
SSBP4-206ENST00000599699 HCLS1P14317 486 aaPredicted RBP36.1■■■■□ 3.37
SSBP4-206ENST00000599699 ALDH1B1P30837 517 aa36.1■■■■□ 3.37
SSBP4-206ENST00000599699 SYNE4Q8N205 404 aa36.1■■■■□ 3.37
SSBP4-206ENST00000599699 PI4KAP1Q8N8J0 262 aa36.1■■■■□ 3.37
SSBP4-206ENST00000599699 TRIM28Q13263 835 aaKnown RBP36.09■■■■□ 3.37
SSBP4-206ENST00000599699 METTL22Q9BUU2 404 aaPredicted RBP36.09■■■■□ 3.37
SSBP4-206ENST00000599699 RASSF7Q02833 373 aa36.08■■■■□ 3.37
SSBP4-206ENST00000599699 SLFN5Q08AF3 891 aa36.08■■■■□ 3.37
SSBP4-206ENST00000599699 FLIIQ13045 1269 aa36.08■■■■□ 3.37
SSBP4-206ENST00000599699 C3orf67Q6ZVT6 689 aa36.08■■■■□ 3.37
SSBP4-206ENST00000599699 C9orf131Q5VYM1 1079 aa36.07■■■■□ 3.36
SSBP4-206ENST00000599699 FAM89AQ96GI7 184 aa36.07■■■■□ 3.36
SSBP4-206ENST00000599699 CDCA7LQ96GN5 454 aa36.07■■■■□ 3.36
SSBP4-206ENST00000599699 FKBP5Q13451 457 aaPredicted RBP36.06■■■■□ 3.36
SSBP4-206ENST00000599699 RTL5Q5HYW3 569 aaPredicted RBP36.06■■■■□ 3.36
SSBP4-206ENST00000599699 RBM17Q96I25 401 aaKnown RBP36.06■■■■□ 3.36
SSBP4-206ENST00000599699 SOGA3Q5TF21 947 aa36.05■■■■□ 3.36
SSBP4-206ENST00000599699 ADCY9O60503 1353 aa36.04■■■■□ 3.36
SSBP4-206ENST00000599699 SLX4Q8IY92 1834 aa36.04■■■■□ 3.36
SSBP4-206ENST00000599699 NEXNQ0ZGT2 675 aa36.04■■■■□ 3.36
SSBP4-206ENST00000599699 RNF181Q9P0P0 153 aa36.04■■■■□ 3.36
SSBP4-206ENST00000599699 HOXA10P31260 410 aaPredicted RBP36.03■■■■□ 3.36
SSBP4-206ENST00000599699 CCDC191Q8NCU4 936 aa36.03■■■■□ 3.36
SSBP4-206ENST00000599699 CWC25Q9NXE8 425 aaPredicted RBP36.03■■■■□ 3.36
SSBP4-206ENST00000599699 CACNA1SQ13698 1873 aa36.02■■■■□ 3.36
SSBP4-206ENST00000599699 NFKBIEO00221 500 aa36.01■■■■□ 3.36
SSBP4-206ENST00000599699 ZBTB38Q8NAP3 1195 aaPredicted RBP36■■■■□ 3.35
SSBP4-206ENST00000599699 CRAMP1Q96RY5 1269 aa36■■■■□ 3.35
SSBP4-206ENST00000599699 LMNB1P20700 586 aa35.99■■■■□ 3.35
SSBP4-206ENST00000599699 CCDC93Q567U6 631 aa35.99■■■■□ 3.35
SSBP4-206ENST00000599699 ZNF526Q8TF50 670 aaPredicted RBP35.99■■■■□ 3.35
SSBP4-206ENST00000599699 C7orf43Q8WVR3 580 aa35.99■■■■□ 3.35
SSBP4-206ENST00000599699 IRS4O14654 1257 aaPredicted RBP35.98■■■■□ 3.35
SSBP4-206ENST00000599699 OLFM4Q6UX06 510 aa35.97■■■■□ 3.35
SSBP4-206ENST00000599699 TAOK3Q9H2K8 898 aa35.97■■■■□ 3.35
SSBP4-206ENST00000599699 IGKV5-2P06315 115 aa35.96■■■■□ 3.35
SSBP4-206ENST00000599699 HNRNPUQ00839 825 aaKnown RBP eCLIP35.96■■■■□ 3.35
SSBP4-206ENST00000599699 DNAAF4Q8WXU2 420 aa35.96■■■■□ 3.35
SSBP4-206ENST00000599699 PCCAP05165 728 aaPredicted RBP35.95■■■■□ 3.35
SSBP4-206ENST00000599699 HSP90B1P14625 803 aaKnown RBP35.95■■■■□ 3.35
SSBP4-206ENST00000599699 DDX46Q7L014 1031 aaKnown RBP35.95■■■■□ 3.35
SSBP4-206ENST00000599699 JARID2Q92833 1246 aaPredicted RBP35.95■■■■□ 3.35
SSBP4-206ENST00000599699 PPEF1O14829 653 aaPredicted RBP35.94■■■■□ 3.34
SSBP4-206ENST00000599699 CWF19L2Q2TBE0 894 aaKnown RBP35.94■■■■□ 3.34
SSBP4-206ENST00000599699 CACNA1FO60840 1977 aa35.94■■■■□ 3.34
SSBP4-206ENST00000599699 ABCC4O15439 1325 aa35.93■■■■□ 3.34
SSBP4-206ENST00000599699 TRMT2AQ8IZ69 625 aaKnown RBP35.93■■■■□ 3.34
SSBP4-206ENST00000599699 RTKN2Q8IZC4 609 aa35.93■■■■□ 3.34
SSBP4-206ENST00000599699 NEURL1BA8MQ27 555 aa35.92■■■■□ 3.34
SSBP4-206ENST00000599699 PRELPP51888 382 aa35.92■■■■□ 3.34
SSBP4-206ENST00000599699 GPBP1L1Q9HC44 474 aaPredicted RBP35.92■■■■□ 3.34
SSBP4-206ENST00000599699 LTBP3Q9NS15 1303 aa35.91■■■■□ 3.34
SSBP4-206ENST00000599699 TMX4Q9H1E5 349 aaPredicted RBP35.91■■■■□ 3.34
SSBP4-206ENST00000599699 F6X3S4 739 aa35.9■■■■□ 3.34
SSBP4-206ENST00000599699 SF3B3Q15393 1217 aaKnown RBP35.89■■■■□ 3.34
SSBP4-206ENST00000599699 CC2D2BQ6DHV5 1058 aa35.89■■■■□ 3.34
SSBP4-206ENST00000599699 FKBP4Q02790 459 aaKnown RBP eCLIP35.88■■■■□ 3.33
SSBP4-206ENST00000599699 LINS1Q8NG48 757 aa35.88■■■■□ 3.33
SSBP4-206ENST00000599699 DDX60Q8IY21 1712 aaKnown RBP35.88■■■■□ 3.33
SSBP4-206ENST00000599699 SBF1O95248 1867 aa35.88■■■■□ 3.33
SSBP4-206ENST00000599699 FER1L6Q2WGJ9 1857 aa35.88■■■■□ 3.33
SSBP4-206ENST00000599699 LAMB2P55268 1798 aa35.87■■■■□ 3.33
SSBP4-206ENST00000599699 BBOX1O75936 387 aa35.87■■■■□ 3.33
SSBP4-206ENST00000599699 GRAPQ13588 217 aa35.87■■■■□ 3.33
SSBP4-206ENST00000599699 MRPL50Q8N5N7 158 aaKnown RBP35.87■■■■□ 3.33
SSBP4-206ENST00000599699 GRAPLQ8TC17 118 aaPredicted RBP35.87■■■■□ 3.33
SSBP4-206ENST00000599699 SSH1Q8WYL5 1049 aa35.86■■■■□ 3.33
SSBP4-206ENST00000599699 PDE8AO60658 829 aa35.85■■■■□ 3.33
SSBP4-206ENST00000599699 GCKRQ14397 625 aa35.85■■■■□ 3.33
SSBP4-206ENST00000599699 BCL2L13Q9BXK5 485 aa35.85■■■■□ 3.33
SSBP4-206ENST00000599699 ZNF277Q9NRM2 450 aaPredicted RBP35.84■■■■□ 3.33
SSBP4-206ENST00000599699 ATP6V0A2Q9Y487 856 aa35.84■■■■□ 3.33
SSBP4-206ENST00000599699 CDHR2Q9BYE9 1310 aa35.83■■■■□ 3.33
SSBP4-206ENST00000599699 GRIPAP1Q4V328 841 aa35.83■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms