RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 ELL2O00472 640 aaPredicted RBP18.54■□□□□ 0.56
IRF3-224ENST00000599680 CCDC93Q567U6 631 aa18.54■□□□□ 0.56
IRF3-224ENST00000599680 CHMP4AQ9BY43 222 aa18.54■□□□□ 0.56
IRF3-224ENST00000599680 NMRK2Q9NPI5 230 aa18.54■□□□□ 0.56
IRF3-224ENST00000599680 RNF123Q5XPI4 1314 aa18.53■□□□□ 0.56
IRF3-224ENST00000599680 LTBP3Q9NS15 1303 aa18.53■□□□□ 0.56
IRF3-224ENST00000599680 KIF3CO14782 793 aa18.53■□□□□ 0.56
IRF3-224ENST00000599680 CCDC27Q2M243 656 aa18.53■□□□□ 0.56
IRF3-224ENST00000599680 CACNA1FO60840 1977 aa18.53■□□□□ 0.56
IRF3-224ENST00000599680 DDX60Q8IY21 1712 aaKnown RBP18.52■□□□□ 0.56
IRF3-224ENST00000599680 TCIRG1Q13488 830 aa18.52■□□□□ 0.56
IRF3-224ENST00000599680 ANKRD13DQ6ZTN6 518 aa18.52■□□□□ 0.56
IRF3-224ENST00000599680 PLBD2Q8NHP8 589 aa18.52■□□□□ 0.56
IRF3-224ENST00000599680 RBM17Q96I25 401 aaKnown RBP18.52■□□□□ 0.56
IRF3-224ENST00000599680 NLRP3Q96P20 1036 aa18.52■□□□□ 0.56
IRF3-224ENST00000599680 PRELPP51888 382 aa18.51■□□□□ 0.55
IRF3-224ENST00000599680 CRY2Q49AN0 593 aa18.51■□□□□ 0.55
IRF3-224ENST00000599680 NLRP10Q86W26 655 aa18.51■□□□□ 0.55
IRF3-224ENST00000599680 WWC1Q8IX03 1113 aa18.51■□□□□ 0.55
IRF3-224ENST00000599680 TRMT112Q9UI30 125 aaKnown RBP18.51■□□□□ 0.55
IRF3-224ENST00000599680 GOLGA2Q08379 1002 aa18.5■□□□□ 0.55
IRF3-224ENST00000599680 DPY19L2Q6NUT2 758 aa18.5■□□□□ 0.55
IRF3-224ENST00000599680 RTKN2Q8IZC4 609 aa18.5■□□□□ 0.55
IRF3-224ENST00000599680 FAM9BQ8IZU0 186 aa18.5■□□□□ 0.55
IRF3-224ENST00000599680 C8orf58Q8NAV2 365 aa18.5■□□□□ 0.55
IRF3-224ENST00000599680 TSR2Q969E8 191 aaKnown RBP18.5■□□□□ 0.55
IRF3-224ENST00000599680 RRAGCQ9HB90 399 aa18.5■□□□□ 0.55
IRF3-224ENST00000599680 TAF1P21675 1872 aa18.5■□□□□ 0.55
IRF3-224ENST00000599680 TOMM70O94826 608 aa18.49■□□□□ 0.55
IRF3-224ENST00000599680 CCDC30Q5VVM6 783 aa18.49■□□□□ 0.55
IRF3-224ENST00000599680 RIC3Q7Z5B4 369 aa18.49■□□□□ 0.55
IRF3-224ENST00000599680 C7orf43Q8WVR3 580 aa18.49■□□□□ 0.55
IRF3-224ENST00000599680 SALL2Q9Y467 1007 aaPredicted RBP18.49■□□□□ 0.55
IRF3-224ENST00000599680 GLTPD2A6NH11 291 aa18.48■□□□□ 0.55
IRF3-224ENST00000599680 HOXA10P31260 410 aaPredicted RBP18.48■□□□□ 0.55
IRF3-224ENST00000599680 FKBP4Q02790 459 aaKnown RBP eCLIP18.48■□□□□ 0.55
IRF3-224ENST00000599680 TMX4Q9H1E5 349 aaPredicted RBP18.48■□□□□ 0.55
IRF3-224ENST00000599680 WDR90Q96KV7 1748 aa18.48■□□□□ 0.55
IRF3-224ENST00000599680 IL16Q14005 1332 aa18.48■□□□□ 0.55
IRF3-224ENST00000599680 SH3TC1Q8TE82 1336 aa18.48■□□□□ 0.55
IRF3-224ENST00000599680 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
IRF3-224ENST00000599680 SLC10A5Q5PT55 438 aa18.47■□□□□ 0.55
IRF3-224ENST00000599680 OLFM4Q6UX06 510 aa18.47■□□□□ 0.55
IRF3-224ENST00000599680 CRAMP1Q96RY5 1269 aa18.47■□□□□ 0.55
IRF3-224ENST00000599680 ATP5J2-PTCD1G3V325 749 aa18.46■□□□□ 0.55
IRF3-224ENST00000599680 PPEF1O14829 653 aaPredicted RBP18.46■□□□□ 0.55
IRF3-224ENST00000599680 DDX58O95786 925 aaKnown RBP18.46■□□□□ 0.55
IRF3-224ENST00000599680 HCLS1P14317 486 aaPredicted RBP18.46■□□□□ 0.55
IRF3-224ENST00000599680 CC2D2BQ6DHV5 1058 aa18.46■□□□□ 0.55
IRF3-224ENST00000599680 ZNF428Q96B54 188 aa18.46■□□□□ 0.55
IRF3-224ENST00000599680 STK31Q9BXU1 1019 aa18.46■□□□□ 0.55
IRF3-224ENST00000599680 PHAXQ9H814 394 aaKnown RBP18.46■□□□□ 0.55
IRF3-224ENST00000599680 TCERG1O14776 1098 aaKnown RBP18.45■□□□□ 0.54
IRF3-224ENST00000599680 C3orf67Q6ZVT6 689 aa18.45■□□□□ 0.54
IRF3-224ENST00000599680 ZNF277Q9NRM2 450 aaPredicted RBP18.45■□□□□ 0.54
IRF3-224ENST00000599680 MYH3P11055 1940 aa18.45■□□□□ 0.54
IRF3-224ENST00000599680 SCN4AP35499 1836 aa18.44■□□□□ 0.54
IRF3-224ENST00000599680 VEGFAP15692 232 aaPredicted RBP18.44■□□□□ 0.54
IRF3-224ENST00000599680 HSPA6P17066 643 aa18.44■□□□□ 0.54
IRF3-224ENST00000599680 TWISTNBQ3B726 338 aaPredicted RBP18.44■□□□□ 0.54
IRF3-224ENST00000599680 GRIPAP1Q4V328 841 aa18.44■□□□□ 0.54
IRF3-224ENST00000599680 SYNE4Q8N205 404 aa18.44■□□□□ 0.54
IRF3-224ENST00000599680 TSPYL6Q8N831 410 aa18.44■□□□□ 0.54
IRF3-224ENST00000599680 RBM46Q8TBY0 533 aaKnown RBP18.44■□□□□ 0.54
IRF3-224ENST00000599680 ISCA1Q9BUE6 129 aa18.44■□□□□ 0.54
IRF3-224ENST00000599680 DDX46Q7L014 1031 aaKnown RBP18.43■□□□□ 0.54
IRF3-224ENST00000599680 WDR63Q8IWG1 891 aa18.43■□□□□ 0.54
IRF3-224ENST00000599680 IARSP41252 1262 aaKnown RBP18.42■□□□□ 0.54
IRF3-224ENST00000599680 FAM89AQ96GI7 184 aa18.42■□□□□ 0.54
IRF3-224ENST00000599680 PSMD1Q99460 953 aa18.42■□□□□ 0.54
IRF3-224ENST00000599680 MYD88Q99836 296 aa18.42■□□□□ 0.54
IRF3-224ENST00000599680 ABCC4O15439 1325 aa18.42■□□□□ 0.54
IRF3-224ENST00000599680 RTL5Q5HYW3 569 aaPredicted RBP18.41■□□□□ 0.54
IRF3-224ENST00000599680 JDP2Q8WYK2 163 aa18.41■□□□□ 0.54
IRF3-224ENST00000599680 FANCIQ9NVI1 1328 aa18.41■□□□□ 0.54
IRF3-224ENST00000599680 HSP90B1P14625 803 aaKnown RBP18.4■□□□□ 0.54
IRF3-224ENST00000599680 FSTL1Q12841 308 aa18.4■□□□□ 0.54
IRF3-224ENST00000599680 TRIM28Q13263 835 aaKnown RBP18.4■□□□□ 0.54
IRF3-224ENST00000599680 LRRC37AA6NMS7 1700 aa18.4■□□□□ 0.54
IRF3-224ENST00000599680 BBOX1O75936 387 aa18.39■□□□□ 0.53
IRF3-224ENST00000599680 DDNO94850 711 aaPredicted RBP18.39■□□□□ 0.53
IRF3-224ENST00000599680 SMC1BQ8NDV3 1235 aa18.39■□□□□ 0.53
IRF3-224ENST00000599680 ATP6V0A2Q9Y487 856 aa18.39■□□□□ 0.53
IRF3-224ENST00000599680 SNED1Q8TER0 1413 aa18.39■□□□□ 0.53
IRF3-224ENST00000599680 SPEF2Q9C093 1822 aa18.38■□□□□ 0.53
IRF3-224ENST00000599680 IRS4O14654 1257 aaPredicted RBP18.38■□□□□ 0.53
IRF3-224ENST00000599680 NEXNQ0ZGT2 675 aa18.38■□□□□ 0.53
IRF3-224ENST00000599680 GRAPQ13588 217 aa18.38■□□□□ 0.53
IRF3-224ENST00000599680 CCDC191Q8NCU4 936 aa18.38■□□□□ 0.53
IRF3-224ENST00000599680 GRAPLQ8TC17 118 aaPredicted RBP18.38■□□□□ 0.53
IRF3-224ENST00000599680 METTL22Q9BUU2 404 aaPredicted RBP18.38■□□□□ 0.53
IRF3-224ENST00000599680 MYH16Q9H6N6 1097 aa18.38■□□□□ 0.53
IRF3-224ENST00000599680 CWC25Q9NXE8 425 aaPredicted RBP18.38■□□□□ 0.53
IRF3-224ENST00000599680 MAP3K2Q9Y2U5 619 aa18.38■□□□□ 0.53
IRF3-224ENST00000599680 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
IRF3-224ENST00000599680 APLP1P51693 650 aa18.37■□□□□ 0.53
IRF3-224ENST00000599680 KSR2Q6VAB6 950 aa18.37■□□□□ 0.53
IRF3-224ENST00000599680 TMC4Q7Z404 712 aa18.37■□□□□ 0.53
IRF3-224ENST00000599680 LARGE2Q8N3Y3 721 aa18.37■□□□□ 0.53
IRF3-224ENST00000599680 SUPT20HQ8NEM7 779 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms