RNA–Protein interactions for RNA: ENST00000599421.1

LINC00649-210, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 728 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-210ENST00000599421 USP16Q9Y5T5 823 aa12.63□□□□□ -0.39
LINC00649-210ENST00000599421 COL4A5P29400 1685 aa12.62□□□□□ -0.39
LINC00649-210ENST00000599421 PRAMEF22A3QJZ6 481 aa12.62□□□□□ -0.39
LINC00649-210ENST00000599421 BTBD11A6QL63 1104 aa12.62□□□□□ -0.39
LINC00649-210ENST00000599421 JDP2Q8WYK2 163 aa12.62□□□□□ -0.39
LINC00649-210ENST00000599421 NUP98P52948 1817 aa12.61□□□□□ -0.39
LINC00649-210ENST00000599421 LMOD1P29536 600 aaPredicted RBP12.61□□□□□ -0.39
LINC00649-210ENST00000599421 EIF6P56537 245 aaKnown RBP12.61□□□□□ -0.39
LINC00649-210ENST00000599421 CYP4F22Q6NT55 531 aa12.61□□□□□ -0.39
LINC00649-210ENST00000599421 PAXIP1Q6ZW49 1069 aaPredicted RBP12.61□□□□□ -0.39
LINC00649-210ENST00000599421 GPR101Q96P66 508 aaPredicted RBP12.61□□□□□ -0.39
LINC00649-210ENST00000599421 SNRPA1P09661 255 aaKnown RBP12.6□□□□□ -0.39
LINC00649-210ENST00000599421 SCNN1DP51172 638 aa12.6□□□□□ -0.39
LINC00649-210ENST00000599421 FMR1Q06787 632 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00649-210ENST00000599421 CRY2Q49AN0 593 aa12.6□□□□□ -0.39
LINC00649-210ENST00000599421 CC2D2BQ6DHV5 1058 aa12.6□□□□□ -0.39
LINC00649-210ENST00000599421 GJA3Q9Y6H8 435 aa12.6□□□□□ -0.39
LINC00649-210ENST00000599421 TNRC18O15417 2968 aaPredicted RBP12.59□□□□□ -0.39
LINC00649-210ENST00000599421 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
LINC00649-210ENST00000599421 MAP2K2P36507 400 aa12.59□□□□□ -0.39
LINC00649-210ENST00000599421 EPS15P42566 896 aa12.59□□□□□ -0.39
LINC00649-210ENST00000599421 GRM1Q13255 1194 aa12.59□□□□□ -0.39
LINC00649-210ENST00000599421 CST9Q5W186 159 aa12.59□□□□□ -0.39
LINC00649-210ENST00000599421 USP50Q70EL3 339 aaPredicted RBP12.59□□□□□ -0.39
LINC00649-210ENST00000599421 TLL2Q9Y6L7 1015 aa12.59□□□□□ -0.39
LINC00649-210ENST00000599421 ABCC12Q96J65 1359 aa12.58□□□□□ -0.4
LINC00649-210ENST00000599421 NBPF26B4DH59 902 aa12.58□□□□□ -0.4
LINC00649-210ENST00000599421 TRAF5O00463 557 aa12.58□□□□□ -0.4
LINC00649-210ENST00000599421 GTF2E1P29083 439 aaPredicted RBP12.58□□□□□ -0.4
LINC00649-210ENST00000599421 PPP2R1AP30153 589 aa12.58□□□□□ -0.4
LINC00649-210ENST00000599421 DCTN1Q14203 1278 aa12.58□□□□□ -0.4
LINC00649-210ENST00000599421 NBPF10Q6P3W6 841 aaKnown RBP12.58□□□□□ -0.4
LINC00649-210ENST00000599421 MCM10Q7L590 875 aa12.58□□□□□ -0.4
LINC00649-210ENST00000599421 NBPF15Q8N660 670 aa12.58□□□□□ -0.4
LINC00649-210ENST00000599421 CA12O43570 354 aa12.57□□□□□ -0.4
LINC00649-210ENST00000599421 HLFQ16534 295 aa12.57□□□□□ -0.4
LINC00649-210ENST00000599421 GRIPAP1Q4V328 841 aa12.57□□□□□ -0.4
LINC00649-210ENST00000599421 LARGE2Q8N3Y3 721 aa12.57□□□□□ -0.4
LINC00649-210ENST00000599421 TSKSQ9UJT2 592 aa12.57□□□□□ -0.4
LINC00649-210ENST00000599421 RIC1Q4ADV7 1423 aa12.56□□□□□ -0.4
LINC00649-210ENST00000599421 AOC2O75106 756 aa12.56□□□□□ -0.4
LINC00649-210ENST00000599421 MCOLN1Q9GZU1 580 aa12.56□□□□□ -0.4
LINC00649-210ENST00000599421 NYXQ9GZU5 481 aa12.56□□□□□ -0.4
LINC00649-210ENST00000599421 MYBBP1AQ9BQG0 1328 aaKnown RBP12.56□□□□□ -0.4
LINC00649-210ENST00000599421 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
LINC00649-210ENST00000599421 HOXA10P31260 410 aaPredicted RBP12.55□□□□□ -0.4
LINC00649-210ENST00000599421 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINC00649-210ENST00000599421 SAPCD2Q86UD0 394 aa12.55□□□□□ -0.4
LINC00649-210ENST00000599421 NUTM1Q86Y26 1132 aa12.55□□□□□ -0.4
LINC00649-210ENST00000599421 RPGRQ92834 1020 aaKnown RBP12.55□□□□□ -0.4
LINC00649-210ENST00000599421 CFAP53Q96M91 514 aa12.55□□□□□ -0.4
LINC00649-210ENST00000599421 BRPF1P55201 1214 aaPredicted RBP12.54□□□□□ -0.4
LINC00649-210ENST00000599421 NIM1KQ8IY84 436 aa12.54□□□□□ -0.4
LINC00649-210ENST00000599421 RTF1Q92541 710 aaKnown RBP12.54□□□□□ -0.4
LINC00649-210ENST00000599421 HHIPL1Q96JK4 782 aa12.54□□□□□ -0.4
LINC00649-210ENST00000599421 CFAP44Q96MT7 982 aa12.54□□□□□ -0.4
LINC00649-210ENST00000599421 MRS2Q9HD23 443 aa12.54□□□□□ -0.4
LINC00649-210ENST00000599421 ADARB2Q9NS39 739 aaKnown RBP12.54□□□□□ -0.4
LINC00649-210ENST00000599421 GPRC5DQ9NZD1 345 aa12.54□□□□□ -0.4
LINC00649-210ENST00000599421 IBTKQ9P2D0 1353 aaPredicted RBP12.54□□□□□ -0.4
LINC00649-210ENST00000599421 LAMB2P55268 1798 aa12.53□□□□□ -0.4
LINC00649-210ENST00000599421 ANKRD36CQ5JPF3 1778 aa12.53□□□□□ -0.4
LINC00649-210ENST00000599421 POLR2AP24928 1970 aaKnown RBP12.53□□□□□ -0.4
LINC00649-210ENST00000599421 ERVV-1B6SEH8 477 aa12.53□□□□□ -0.4
LINC00649-210ENST00000599421 CELF2O95319 508 aaKnown RBP12.53□□□□□ -0.4
LINC00649-210ENST00000599421 CRAMP1Q96RY5 1269 aa12.53□□□□□ -0.4
LINC00649-210ENST00000599421 PPEF1O14829 653 aaPredicted RBP12.52□□□□□ -0.41
LINC00649-210ENST00000599421 PPIP5K2O43314 1243 aa12.52□□□□□ -0.41
LINC00649-210ENST00000599421 SLC51AQ86UW1 340 aa12.52□□□□□ -0.41
LINC00649-210ENST00000599421 RBM17Q96I25 401 aaKnown RBP12.52□□□□□ -0.41
LINC00649-210ENST00000599421 MIS18AQ9NYP9 233 aa12.52□□□□□ -0.41
LINC00649-210ENST00000599421 MAP3K15Q6ZN16 1313 aa12.52□□□□□ -0.41
LINC00649-210ENST00000599421 AKAP11Q9UKA4 1901 aa12.51□□□□□ -0.41
LINC00649-210ENST00000599421 DGKZQ13574 1117 aa12.51□□□□□ -0.41
LINC00649-210ENST00000599421 AOC3Q16853 763 aa12.51□□□□□ -0.41
LINC00649-210ENST00000599421 YTHDC1Q96MU7 727 aaKnown RBP12.51□□□□□ -0.41
LINC00649-210ENST00000599421 GLIS2Q9BZE0 524 aaPredicted RBP12.51□□□□□ -0.41
LINC00649-210ENST00000599421 VPS33BQ9H267 617 aa12.51□□□□□ -0.41
LINC00649-210ENST00000599421 PGAP2Q9UHJ9 254 aa12.51□□□□□ -0.41
LINC00649-210ENST00000599421 NUDCQ9Y266 331 aa12.51□□□□□ -0.41
LINC00649-210ENST00000599421 TCERG1O14776 1098 aaKnown RBP12.5□□□□□ -0.41
LINC00649-210ENST00000599421 HTATSF1O43719 755 aaKnown RBP12.5□□□□□ -0.41
LINC00649-210ENST00000599421 CIAPIN1Q6FI81 312 aa12.5□□□□□ -0.41
LINC00649-210ENST00000599421 THUMPD2Q9BTF0 503 aaKnown RBP12.5□□□□□ -0.41
LINC00649-210ENST00000599421 ZNRF3Q9ULT6 936 aa12.5□□□□□ -0.41
LINC00649-210ENST00000599421 UBN2Q6ZU65 1347 aa12.5□□□□□ -0.41
LINC00649-210ENST00000599421 CDHR2Q9BYE9 1310 aa12.5□□□□□ -0.41
LINC00649-210ENST00000599421 GPTP24298 496 aa12.49□□□□□ -0.41
LINC00649-210ENST00000599421 GMPSP49915 693 aaPredicted RBP12.49□□□□□ -0.41
LINC00649-210ENST00000599421 CXCL9Q07325 125 aa12.49□□□□□ -0.41
LINC00649-210ENST00000599421 NOGQ13253 232 aa12.49□□□□□ -0.41
LINC00649-210ENST00000599421 TAF7Q15545 349 aaPredicted RBP12.49□□□□□ -0.41
LINC00649-210ENST00000599421 SUSD4Q5VX71 490 aa12.49□□□□□ -0.41
LINC00649-210ENST00000599421 KIF6Q6ZMV9 814 aa12.49□□□□□ -0.41
LINC00649-210ENST00000599421 NGEFQ8N5V2 710 aa12.49□□□□□ -0.41
LINC00649-210ENST00000599421 ZC3H15Q8WU90 426 aaKnown RBP12.49□□□□□ -0.41
LINC00649-210ENST00000599421 TMX4Q9H1E5 349 aaPredicted RBP12.49□□□□□ -0.41
LINC00649-210ENST00000599421 TAF1P21675 1872 aa12.48□□□□□ -0.41
LINC00649-210ENST00000599421 NTSR2O95665 410 aa12.48□□□□□ -0.41
LINC00649-210ENST00000599421 TTLL7Q6ZT98 887 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms