RNA–Protein interactions for RNA: ENST00000599389.1

CEACAM1-213, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene CEACAM1, Length 1,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-213ENST00000599389 LAMA3Q16787 3333 aa9.74□□□□□ -0.85
CEACAM1-213ENST00000599389 KIAA0100Q14667 2235 aaKnown RBP9.73□□□□□ -0.85
CEACAM1-213ENST00000599389 STARD3NLO95772 234 aa9.73□□□□□ -0.85
CEACAM1-213ENST00000599389 HEG1Q9ULI3 1381 aa9.73□□□□□ -0.85
CEACAM1-213ENST00000599389 RBBP6Q7Z6E9 1792 aaKnown RBP9.73□□□□□ -0.85
CEACAM1-213ENST00000599389 RIC1Q4ADV7 1423 aa9.72□□□□□ -0.85
CEACAM1-213ENST00000599389 FAM155AB1AL88 458 aaPredicted RBP9.72□□□□□ -0.85
CEACAM1-213ENST00000599389 EIF6P56537 245 aaKnown RBP9.72□□□□□ -0.85
CEACAM1-213ENST00000599389 SULT6B1Q6IMI4 303 aa9.72□□□□□ -0.85
CEACAM1-213ENST00000599389 CTU1Q7Z7A3 348 aaKnown RBP9.72□□□□□ -0.85
CEACAM1-213ENST00000599389 JDP2Q8WYK2 163 aa9.72□□□□□ -0.85
CEACAM1-213ENST00000599389 GLIS2Q9BZE0 524 aaPredicted RBP9.72□□□□□ -0.85
CEACAM1-213ENST00000599389 ADARB2Q9NS39 739 aaKnown RBP9.72□□□□□ -0.85
CEACAM1-213ENST00000599389 GPRC5DQ9NZD1 345 aa9.72□□□□□ -0.85
CEACAM1-213ENST00000599389 GJA3Q9Y6H8 435 aa9.72□□□□□ -0.85
CEACAM1-213ENST00000599389 FXR1P51114 621 aaKnown RBP eCLIP9.71□□□□□ -0.86
CEACAM1-213ENST00000599389 CRY2Q49AN0 593 aa9.71□□□□□ -0.86
CEACAM1-213ENST00000599389 NBPF15Q8N660 670 aa9.71□□□□□ -0.86
CEACAM1-213ENST00000599389 ZNF496Q96IT1 587 aaPredicted RBP9.71□□□□□ -0.86
CEACAM1-213ENST00000599389 HPS5Q9UPZ3 1129 aa9.71□□□□□ -0.86
CEACAM1-213ENST00000599389 POLR2AP24928 1970 aaKnown RBP9.7□□□□□ -0.86
CEACAM1-213ENST00000599389 UNC80Q8N2C7 3258 aa9.7□□□□□ -0.86
CEACAM1-213ENST00000599389 RGL2O15211 777 aa9.7□□□□□ -0.86
CEACAM1-213ENST00000599389 TNNT2P45379 298 aaPredicted RBP9.7□□□□□ -0.86
CEACAM1-213ENST00000599389 CLEC4GQ6UXB4 293 aa9.7□□□□□ -0.86
CEACAM1-213ENST00000599389 NBPF5PQ86XG9 351 aaPredicted RBP9.7□□□□□ -0.86
CEACAM1-213ENST00000599389 CDHR2Q9BYE9 1310 aa9.69□□□□□ -0.86
CEACAM1-213ENST00000599389 ABCC12Q96J65 1359 aa9.69□□□□□ -0.86
CEACAM1-213ENST00000599389 IL13P35225 146 aa9.69□□□□□ -0.86
CEACAM1-213ENST00000599389 CC2D2BQ6DHV5 1058 aa9.69□□□□□ -0.86
CEACAM1-213ENST00000599389 ZC3H15Q8WU90 426 aaKnown RBP9.69□□□□□ -0.86
CEACAM1-213ENST00000599389 RNF186Q9NXI6 227 aa9.69□□□□□ -0.86
CEACAM1-213ENST00000599389 NPC1L1Q9UHC9 1359 aa9.68□□□□□ -0.86
CEACAM1-213ENST00000599389 NPHP1O15259 732 aa9.68□□□□□ -0.86
CEACAM1-213ENST00000599389 ALDH1B1P30837 517 aa9.68□□□□□ -0.86
CEACAM1-213ENST00000599389 HIRAP54198 1017 aaPredicted RBP9.68□□□□□ -0.86
CEACAM1-213ENST00000599389 HUNKP57058 714 aa9.68□□□□□ -0.86
CEACAM1-213ENST00000599389 SLC51AQ86UW1 340 aa9.68□□□□□ -0.86
CEACAM1-213ENST00000599389 DZIP3Q86Y13 1208 aaKnown RBP9.68□□□□□ -0.86
CEACAM1-213ENST00000599389 TEX13AQ9BXU3 409 aaPredicted RBP9.68□□□□□ -0.86
CEACAM1-213ENST00000599389 A1BGP04217 495 aa9.67□□□□□ -0.86
CEACAM1-213ENST00000599389 GRIPAP1Q4V328 841 aa9.67□□□□□ -0.86
CEACAM1-213ENST00000599389 ZNF790Q6PG37 636 aa9.67□□□□□ -0.86
CEACAM1-213ENST00000599389 LARGE2Q8N3Y3 721 aa9.67□□□□□ -0.86
CEACAM1-213ENST00000599389 ZNF330Q9Y3S2 320 aaPredicted RBP9.67□□□□□ -0.86
CEACAM1-213ENST00000599389 NUP98P52948 1817 aa9.67□□□□□ -0.86
CEACAM1-213ENST00000599389 KIF7Q2M1P5 1343 aa9.67□□□□□ -0.86
CEACAM1-213ENST00000599389 TRPA1O75762 1119 aa9.66□□□□□ -0.86
CEACAM1-213ENST00000599389 GMPSP49915 693 aaPredicted RBP9.66□□□□□ -0.86
CEACAM1-213ENST00000599389 KIF23Q02241 960 aaPredicted RBP9.66□□□□□ -0.86
CEACAM1-213ENST00000599389 PKN2Q16513 984 aaKnown RBP9.66□□□□□ -0.86
CEACAM1-213ENST00000599389 RGMBQ6NW40 437 aa9.66□□□□□ -0.86
CEACAM1-213ENST00000599389 CDC37L1Q7L3B6 337 aa9.66□□□□□ -0.86
CEACAM1-213ENST00000599389 TTC5Q8N0Z6 440 aa9.66□□□□□ -0.86
CEACAM1-213ENST00000599389 TRPM4Q8TD43 1214 aa9.66□□□□□ -0.86
CEACAM1-213ENST00000599389 ZNF408Q9H9D4 720 aa9.66□□□□□ -0.86
CEACAM1-213ENST00000599389 SLC10A3P09131 477 aa9.65□□□□□ -0.86
CEACAM1-213ENST00000599389 HOXA10P31260 410 aaPredicted RBP9.65□□□□□ -0.86
CEACAM1-213ENST00000599389 CXCL9Q07325 125 aa9.65□□□□□ -0.86
CEACAM1-213ENST00000599389 MTHFSDQ2M296 383 aaKnown RBP9.65□□□□□ -0.86
CEACAM1-213ENST00000599389 TPTE2Q6XPS3 522 aa9.65□□□□□ -0.86
CEACAM1-213ENST00000599389 ZNF652Q9Y2D9 606 aa9.65□□□□□ -0.86
CEACAM1-213ENST00000599389 LAMB4A4D0S4 1761 aa9.65□□□□□ -0.86
CEACAM1-213ENST00000599389 PAPPA2Q9BXP8 1791 aa9.65□□□□□ -0.86
CEACAM1-213ENST00000599389 CEMIPQ8WUJ3 1361 aa9.65□□□□□ -0.87
CEACAM1-213ENST00000599389 IBTKQ9P2D0 1353 aaPredicted RBP9.65□□□□□ -0.87
CEACAM1-213ENST00000599389 VCANP13611 3396 aa9.64□□□□□ -0.87
CEACAM1-213ENST00000599389 DUOX1Q9NRD9 1551 aa9.64□□□□□ -0.87
CEACAM1-213ENST00000599389 NIM1KQ8IY84 436 aa9.64□□□□□ -0.87
CEACAM1-213ENST00000599389 CCDC102AQ96A19 550 aa9.64□□□□□ -0.87
CEACAM1-213ENST00000599389 CSRNP1Q96S65 589 aa9.64□□□□□ -0.87
CEACAM1-213ENST00000599389 DLK2Q6UY11 383 aa9.63□□□□□ -0.87
CEACAM1-213ENST00000599389 FMNL2Q96PY5 1086 aa9.63□□□□□ -0.87
CEACAM1-213ENST00000599389 VPS33BQ9H267 617 aa9.63□□□□□ -0.87
CEACAM1-213ENST00000599389 GBA2Q9HCG7 927 aaPredicted RBP9.63□□□□□ -0.87
CEACAM1-213ENST00000599389 NIP7Q9Y221 180 aaKnown RBP eCLIP9.63□□□□□ -0.87
CEACAM1-213ENST00000599389 LRRC37AA6NMS7 1700 aa9.63□□□□□ -0.87
CEACAM1-213ENST00000599389 LAMB2P55268 1798 aa9.63□□□□□ -0.87
CEACAM1-213ENST00000599389 SHTN1A0MZ66 631 aa9.62□□□□□ -0.87
CEACAM1-213ENST00000599389 PPIP5K2O43314 1243 aa9.62□□□□□ -0.87
CEACAM1-213ENST00000599389 PIP4K2AP48426 406 aaPredicted RBP9.62□□□□□ -0.87
CEACAM1-213ENST00000599389 AOC3Q16853 763 aa9.62□□□□□ -0.87
CEACAM1-213ENST00000599389 NOM1Q5C9Z4 860 aaKnown RBP9.62□□□□□ -0.87
CEACAM1-213ENST00000599389 IL17REQ8NFR9 667 aa9.62□□□□□ -0.87
CEACAM1-213ENST00000599389 RTFDC1Q9BY42 306 aaPredicted RBP9.62□□□□□ -0.87
CEACAM1-213ENST00000599389 ZNRF3Q9ULT6 936 aa9.62□□□□□ -0.87
CEACAM1-213ENST00000599389 ANKRD36CQ5JPF3 1778 aa9.61□□□□□ -0.87
CEACAM1-213ENST00000599389 NBPF26B4DH59 902 aa9.61□□□□□ -0.87
CEACAM1-213ENST00000599389 ZNF157P51786 506 aaPredicted RBP9.61□□□□□ -0.87
CEACAM1-213ENST00000599389 NBPF10Q6P3W6 841 aaKnown RBP9.61□□□□□ -0.87
CEACAM1-213ENST00000599389 FBXO46Q6PJ61 603 aaPredicted RBP9.61□□□□□ -0.87
CEACAM1-213ENST00000599389 USP48Q86UV5 1035 aa9.61□□□□□ -0.87
CEACAM1-213ENST00000599389 REM2Q8IYK8 340 aaPredicted RBP9.61□□□□□ -0.87
CEACAM1-213ENST00000599389 ZNF296Q8WUU4 475 aaPredicted RBP9.61□□□□□ -0.87
CEACAM1-213ENST00000599389 CRAMP1Q96RY5 1269 aa9.61□□□□□ -0.87
CEACAM1-213ENST00000599389 USP16Q9Y5T5 823 aa9.61□□□□□ -0.87
CEACAM1-213ENST00000599389 DDX60Q8IY21 1712 aaKnown RBP9.61□□□□□ -0.87
CEACAM1-213ENST00000599389 LAMB1P07942 1786 aa9.61□□□□□ -0.87
CEACAM1-213ENST00000599389 COL3A1P02461 1466 aaPredicted RBP9.61□□□□□ -0.87
CEACAM1-213ENST00000599389 PPEF1O14829 653 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms