RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	CEP63	Q96MT8	703 aa		11.2	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	CITED4	Q96RK1	184 aa		11.2	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	LOR	P23490	312 aa	Predicted RBP	11.19	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	USP20	Q9Y2K6	914 aa		11.19	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	ANKRD33B	A6NCL7	494 aa		11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	ATXN7	O15265	892 aa	Predicted RBP	11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	PPFIA3	O75145	1194 aa		11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	ERCC3	P19447	782 aa		11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	GRN	P28799	593 aa	Known RBP	11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	FIGNL1	Q6PIW4	674 aa		11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	TMC7	Q7Z402	723 aa		11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	RGL4	Q8IZJ4	473 aa		11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	GJD3	Q8N144	294 aa		11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	SLC16A10	Q8TF71	515 aa		11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	NUDT16	Q96DE0	195 aa	Known RBP	11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	ZNF837	Q96EG3	531 aa	Predicted RBP	11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	GMCL1	Q96IK5	515 aa		11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	BRD7	Q9NPI1	651 aa		11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	RTCB	Q9Y3I0	505 aa	Known RBP	11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	PCDHGC4	Q9Y5F7	938 aa		11.18	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	FAM157B	P0CG42	384 aa		11.17	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	ZSCAN1	Q8NBB4	408 aa		11.17	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	PIK3R5	Q8WYR1	880 aa		11.17	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	FAM129B	Q96TA1	746 aa		11.17	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	EFS	O43281	561 aa		11.16	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	IGHA2	P01877	340 aa		11.16	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	GMPR	P36959	345 aa		11.16	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	USP5	P45974	858 aa		11.16	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	NPAS4	Q8IUM7	802 aa		11.16	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.16	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	GGNBP2	Q9H3C7	697 aa		11.16	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	NDFIP2	Q9NV92	336 aa		11.16	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	NXF1	Q9UBU9	619 aa	Known RBP	11.16	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	PCSK2	P16519	638 aa		11.15	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	TMC1	Q8TDI8	760 aa		11.15	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	KCNMB2	Q9Y691	235 aa		11.15	□□□□□ -0.62
SOX2-OT-231	ENST00000599082	DCDC2B	A2VCK2	349 aa		11.14	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	BNIP3L	O60238	219 aa		11.14	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	EPB42	P16452	691 aa		11.14	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	KCNQ4	P56696	695 aa		11.14	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	TNP2	Q05952	138 aa		11.14	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	PDE3B	Q13370	1112 aa		11.14	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	TRIP4	Q15650	581 aa	Predicted RBP	11.14	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	CMTR1	Q8N1G2	835 aa	Known RBP	11.14	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	GTPBP3	Q969Y2	492 aa	Known RBP	11.14	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	DMRTB1	Q96MA1	342 aa		11.14	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	HCN2	Q9UL51	889 aa		11.14	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	KHNYN	O15037	678 aa	Known RBP	11.13	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	GPR182	O15218	404 aa		11.13	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	RPLP1	P05386	114 aa	Known RBP	11.13	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	MAPT	P10636	758 aa	Known RBP	11.13	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	SFSWAP	Q12872	951 aa	Known RBP	11.13	□□□□□ -0.63
SOX2-OT-231	ENST00000599082		A6NHS1	94 aa		11.12	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	TREH	O43280	583 aa		11.12	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	C8orf34	Q49A92	452 aa		11.12	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	ABHD17A	Q96GS6	310 aa		11.12	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	STRN4	Q9NRL3	753 aa		11.12	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	KCNH4	Q9UQ05	1017 aa		11.12	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	LAMC2	Q13753	1193 aa		11.11	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	DSC3	Q14574	896 aa		11.11	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	VWA5B2	Q8N398	1253 aa		11.11	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	NANOS1	Q8WY41	292 aa	Known RBP	11.11	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	IRF7	Q92985	503 aa		11.11	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	CDC14C	A4D256	554 aa		11.1	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	EHHADH	Q08426	723 aa		11.1	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	ALKBH8	Q96BT7	664 aa	Known RBP	11.1	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	C11orf16	Q9NQ32	467 aa		11.1	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	FNDC3A	Q9Y2H6	1198 aa	Known RBP	11.1	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	UBAP1L	F5GYI3	381 aa		11.09	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	XYLB	O75191	536 aa		11.09	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	EGFR	P00533	1210 aa		11.09	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	NPAS3	Q8IXF0	933 aa		11.09	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	TTC16	Q8NEE8	873 aa		11.09	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	11.09	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	AMOTL2	Q9Y2J4	779 aa		11.09	□□□□□ -0.63
SOX2-OT-231	ENST00000599082	GPR25	O00155	361 aa		11.08	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	FMR1	Q06787	632 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	GRIN2C	Q14957	1233 aa		11.08	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	COL19A1	Q14993	1142 aa		11.08	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	XKR5	Q6UX68	686 aa		11.08	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	SV2A	Q7L0J3	742 aa		11.08	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	CFHR5	Q9BXR6	569 aa		11.08	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	NIF3L1	Q9GZT8	377 aa		11.08	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	MARK1	Q9P0L2	795 aa		11.08	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	PLCB3	Q01970	1234 aa		11.07	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	PDE12	Q6L8Q7	609 aa	Known RBP	11.07	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	GSX2	Q9BZM3	304 aa		11.07	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	P4HB	P07237	508 aa	Known RBP	11.06	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	CD33	P20138	364 aa		11.06	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	FGFR3	P22607	806 aa		11.06	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	VEGFB	P49765	207 aa		11.06	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	FOXR1	Q6PIV2	292 aa		11.06	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	FBXO33	Q7Z6M2	555 aa		11.06	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	TRERF1	Q96PN7	1200 aa		11.06	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	PHF24	Q9UPV7	400 aa		11.06	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	CCIN	Q13939	588 aa		11.05	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	ZNF438	Q7Z4V0	828 aa		11.05	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	BCL2L13	Q9BXK5	485 aa		11.05	□□□□□ -0.64
SOX2-OT-231	ENST00000599082	ELP3	Q9H9T3	547 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms