RNA–Protein interactions for RNA: ENST00000598867.1

SOX2-OT-230, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 348 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-230ENST00000598867 FAM13BQ9NYF5 915 aa7.61□□□□□ -1.19
SOX2-OT-230ENST00000598867 USP31Q70CQ4 1352 aa7.6□□□□□ -1.19
SOX2-OT-230ENST00000598867 GGCXP38435 758 aa7.6□□□□□ -1.19
SOX2-OT-230ENST00000598867 USPL1Q5W0Q7 1092 aa7.6□□□□□ -1.19
SOX2-OT-230ENST00000598867 VPS37DQ86XT2 251 aa7.6□□□□□ -1.19
SOX2-OT-230ENST00000598867 NIFKQ9BYG3 293 aaKnown RBP7.6□□□□□ -1.19
SOX2-OT-230ENST00000598867 ZSWIM4Q9H7M6 989 aa7.6□□□□□ -1.19
SOX2-OT-230ENST00000598867 MEN1O00255 615 aa7.59□□□□□ -1.19
SOX2-OT-230ENST00000598867 GIPC1O14908 333 aa7.59□□□□□ -1.19
SOX2-OT-230ENST00000598867 MICAL2O94851 1124 aa7.59□□□□□ -1.19
SOX2-OT-230ENST00000598867 FGRP09769 529 aa7.59□□□□□ -1.19
SOX2-OT-230ENST00000598867 IRS1P35568 1242 aa7.59□□□□□ -1.19
SOX2-OT-230ENST00000598867 TXLNAP40222 546 aa7.59□□□□□ -1.19
SOX2-OT-230ENST00000598867 CBLBQ13191 982 aa7.59□□□□□ -1.19
SOX2-OT-230ENST00000598867 SOGA3Q5TF21 947 aa7.59□□□□□ -1.19
SOX2-OT-230ENST00000598867 MEI1Q5TIA1 1274 aa7.59□□□□□ -1.19
SOX2-OT-230ENST00000598867 EPS8L3Q8TE67 593 aaKnown RBP7.59□□□□□ -1.19
SOX2-OT-230ENST00000598867 CCDC74AQ96AQ1 378 aa7.59□□□□□ -1.19
SOX2-OT-230ENST00000598867 ZSCAN10Q96SZ4 725 aaPredicted RBP7.59□□□□□ -1.19
SOX2-OT-230ENST00000598867 STK10O94804 968 aaKnown RBP7.58□□□□□ -1.2
SOX2-OT-230ENST00000598867 GJA8P48165 433 aa7.58□□□□□ -1.2
SOX2-OT-230ENST00000598867 KCNC4Q03721 635 aa7.58□□□□□ -1.2
SOX2-OT-230ENST00000598867 TAF1CQ15572 869 aaPredicted RBP7.58□□□□□ -1.2
SOX2-OT-230ENST00000598867 SDE2Q6IQ49 451 aa7.58□□□□□ -1.2
SOX2-OT-230ENST00000598867 NLRP3Q96P20 1036 aa7.58□□□□□ -1.2
SOX2-OT-230ENST00000598867 OSBPL2Q9H1P3 480 aa7.58□□□□□ -1.2
SOX2-OT-230ENST00000598867 FOXD3Q9UJU5 478 aaPredicted RBP7.58□□□□□ -1.2
SOX2-OT-230ENST00000598867 TBX22Q9Y458 520 aa7.58□□□□□ -1.2
SOX2-OT-230ENST00000598867 THOC2Q8NI27 1593 aaKnown RBP7.58□□□□□ -1.2
SOX2-OT-230ENST00000598867 TNFRSF21O75509 655 aa7.57□□□□□ -1.2
SOX2-OT-230ENST00000598867 PTGIRP43119 386 aa7.57□□□□□ -1.2
SOX2-OT-230ENST00000598867 ST13P50502 369 aaKnown RBP7.57□□□□□ -1.2
SOX2-OT-230ENST00000598867 PAK2Q13177 524 aa7.57□□□□□ -1.2
SOX2-OT-230ENST00000598867 TMEM214Q6NUQ4 689 aaKnown RBP7.57□□□□□ -1.2
SOX2-OT-230ENST00000598867 RHBDD1Q8TEB9 315 aa7.57□□□□□ -1.2
SOX2-OT-230ENST00000598867 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.57□□□□□ -1.2
SOX2-OT-230ENST00000598867 FAM8A1Q9UBU6 413 aa7.57□□□□□ -1.2
SOX2-OT-230ENST00000598867 V9GY48 417 aaPredicted RBP7.57□□□□□ -1.2
SOX2-OT-230ENST00000598867 NCAPD3P42695 1498 aa7.56□□□□□ -1.2
SOX2-OT-230ENST00000598867 TGFBR3LH3BV60 316 aa7.56□□□□□ -1.2
SOX2-OT-230ENST00000598867 USP17L7P0C7H9 530 aa7.56□□□□□ -1.2
SOX2-OT-230ENST00000598867 ATF4P18848 351 aaPredicted RBP7.56□□□□□ -1.2
SOX2-OT-230ENST00000598867 Q6ZVU0 165 aa7.56□□□□□ -1.2
SOX2-OT-230ENST00000598867 ERMP1Q7Z2K6 904 aa7.56□□□□□ -1.2
SOX2-OT-230ENST00000598867 SNX29Q8TEQ0 813 aa7.56□□□□□ -1.2
SOX2-OT-230ENST00000598867 MRGPRX2Q96LB1 330 aa7.56□□□□□ -1.2
SOX2-OT-230ENST00000598867 AGBL1Q96MI9 1066 aa7.56□□□□□ -1.2
SOX2-OT-230ENST00000598867 WNT7AO00755 349 aa7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 ITGBL1O95965 494 aaPredicted RBP7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 GTF2E1P29083 439 aaPredicted RBP7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 NNTQ13423 1086 aa7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 HIF1AQ16665 826 aa7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 EGFLAMQ63HQ2 1017 aa7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 XKR5Q6UX68 686 aa7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 NLGN1Q8N2Q7 840 aa7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 RHPN1Q8TCX5 695 aa7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 C7orf43Q8WVR3 580 aa7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 GPRASP2Q96D09 838 aa7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 ZFYVE28Q9HCC9 887 aa7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 HMGXB3Q12766 1538 aa7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 SBNO2Q9Y2G9 1366 aa7.55□□□□□ -1.2
SOX2-OT-230ENST00000598867 NESP48681 1621 aa7.54□□□□□ -1.2
SOX2-OT-230ENST00000598867 PLA2G4AP47712 749 aa7.54□□□□□ -1.2
SOX2-OT-230ENST00000598867 BMS1Q14692 1282 aaKnown RBP7.54□□□□□ -1.2
SOX2-OT-230ENST00000598867 ZNF746Q6NUN9 644 aaPredicted RBP7.54□□□□□ -1.2
SOX2-OT-230ENST00000598867 LIAT1Q6ZQX7 453 aa7.54□□□□□ -1.2
SOX2-OT-230ENST00000598867 ZNF438Q7Z4V0 828 aa7.54□□□□□ -1.2
SOX2-OT-230ENST00000598867 KLRG1Q96E93 195 aa7.54□□□□□ -1.2
SOX2-OT-230ENST00000598867 SRCIN1Q9C0H9 1055 aa7.54□□□□□ -1.2
SOX2-OT-230ENST00000598867 COPRSQ9NQ92 184 aa7.54□□□□□ -1.2
SOX2-OT-230ENST00000598867 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.54□□□□□ -1.2
SOX2-OT-230ENST00000598867 DMGDHQ9UI17 866 aaKnown RBP7.54□□□□□ -1.2
SOX2-OT-230ENST00000598867 IDH3AP50213 366 aa7.53□□□□□ -1.2
SOX2-OT-230ENST00000598867 RELBQ01201 579 aa7.53□□□□□ -1.2
SOX2-OT-230ENST00000598867 TRIP4Q15650 581 aaPredicted RBP7.53□□□□□ -1.2
SOX2-OT-230ENST00000598867 NXPE4Q6UWF7 544 aa7.53□□□□□ -1.2
SOX2-OT-230ENST00000598867 SUSD3Q96L08 255 aa7.53□□□□□ -1.2
SOX2-OT-230ENST00000598867 NPHS2Q9NP85 383 aa7.53□□□□□ -1.2
SOX2-OT-230ENST00000598867 USP20Q9Y2K6 914 aa7.53□□□□□ -1.2
SOX2-OT-230ENST00000598867 SMARCA2P51531 1590 aa7.53□□□□□ -1.2
SOX2-OT-230ENST00000598867 PHACTR2O75167 634 aa7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 ALDH1A1P00352 501 aa7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 C4orf17Q53FE4 359 aa7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 GNASQ5JWF2 1037 aa7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 IER5Q5VY09 327 aa7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 PDE12Q6L8Q7 609 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 JAZF1Q86VZ6 243 aa7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 ZNF280CQ8ND82 737 aa7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 RASGRP4Q8TDF6 673 aa7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 EMID1Q96A84 441 aaPredicted RBP7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 ITPKCQ96DU7 683 aa7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 HSH2DQ96JZ2 352 aa7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 BCO2Q9BYV7 579 aa7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 ZNF395Q9H8N7 513 aaPredicted RBP7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 FNDC3AQ9Y2H6 1198 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-230ENST00000598867 KIF21AQ7Z4S6 1674 aa7.51□□□□□ -1.21
SOX2-OT-230ENST00000598867 ATAD2BQ9ULI0 1458 aa7.51□□□□□ -1.21
SOX2-OT-230ENST00000598867 ARSDP51689 593 aa7.51□□□□□ -1.21
SOX2-OT-230ENST00000598867 NBPF1Q3BBV0 1214 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms